RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 USP21Q9UK80 565 aa15.55■□□□□ 0.08
ERGIC3-219ENST00000496172 KIF1BO60333 1816 aa15.54■□□□□ 0.08
ERGIC3-219ENST00000496172 SOS2Q07890 1332 aaPredicted RBP15.54■□□□□ 0.08
ERGIC3-219ENST00000496172 VGFO15240 615 aaPredicted RBP15.53■□□□□ 0.08
ERGIC3-219ENST00000496172 MYOM2P54296 1465 aa15.52■□□□□ 0.08
ERGIC3-219ENST00000496172 RPGRIP1LQ68CZ1 1315 aa15.52■□□□□ 0.08
ERGIC3-219ENST00000496172 ADAMTS2O95450 1211 aa15.52■□□□□ 0.08
ERGIC3-219ENST00000496172 DDX17Q92841 729 aaKnown RBP15.52■□□□□ 0.08
ERGIC3-219ENST00000496172 PRAG1Q86YV5 1406 aa15.51■□□□□ 0.07
ERGIC3-219ENST00000496172 METP08581 1390 aa15.51■□□□□ 0.07
ERGIC3-219ENST00000496172 BCL9LQ86UU0 1499 aa15.51■□□□□ 0.07
ERGIC3-219ENST00000496172 CCDC144AA2RUR9 1427 aa15.51■□□□□ 0.07
ERGIC3-219ENST00000496172 BLMP54132 1417 aaPredicted RBP15.51■□□□□ 0.07
ERGIC3-219ENST00000496172 NEXMIFQ5QGS0 1516 aa15.49■□□□□ 0.07
ERGIC3-219ENST00000496172 RAB3GAP2Q9H2M9 1393 aa15.49■□□□□ 0.07
ERGIC3-219ENST00000496172 GLI3P10071 1580 aa15.45■□□□□ 0.06
ERGIC3-219ENST00000496172 RGL3Q3MIN7 710 aa15.45■□□□□ 0.06
ERGIC3-219ENST00000496172 BRWD3Q6RI45 1802 aa15.44■□□□□ 0.06
ERGIC3-219ENST00000496172 PXDNQ92626 1479 aa15.44■□□□□ 0.06
ERGIC3-219ENST00000496172 HRCP23327 699 aa15.43■□□□□ 0.06
ERGIC3-219ENST00000496172 GJD4Q96KN9 370 aaPredicted RBP15.43■□□□□ 0.06
ERGIC3-219ENST00000496172 CDC42BPGQ6DT37 1551 aa15.43■□□□□ 0.06
ERGIC3-219ENST00000496172 SLIT2O94813 1529 aa15.42■□□□□ 0.06
ERGIC3-219ENST00000496172 RALGAPBQ86X10 1494 aa15.41■□□□□ 0.06
ERGIC3-219ENST00000496172 ANKRD30BQ9BXX2 1392 aa15.41■□□□□ 0.06
ERGIC3-219ENST00000496172 ORAI2Q96SN7 254 aa15.41■□□□□ 0.06
ERGIC3-219ENST00000496172 PPLO60437 1756 aa15.4■□□□□ 0.06
ERGIC3-219ENST00000496172 SPATA31E1Q6ZUB1 1445 aa15.4■□□□□ 0.06
ERGIC3-219ENST00000496172 NPHP3Q7Z494 1330 aa15.4■□□□□ 0.06
ERGIC3-219ENST00000496172 ROBO2Q9HCK4 1378 aa15.38■□□□□ 0.05
ERGIC3-219ENST00000496172 ADGRF5Q8IZF2 1346 aa15.38■□□□□ 0.05
ERGIC3-219ENST00000496172 USP32Q8NFA0 1604 aa15.37■□□□□ 0.05
ERGIC3-219ENST00000496172 DEFB132Q7Z7B7 95 aa15.36■□□□□ 0.05
ERGIC3-219ENST00000496172 NWD2Q9ULI1 1742 aa15.36■□□□□ 0.05
ERGIC3-219ENST00000496172 UNC5CLQ8IV45 518 aa15.35■□□□□ 0.05
ERGIC3-219ENST00000496172 SF3B2Q13435 895 aaKnown RBP15.33■□□□□ 0.04
ERGIC3-219ENST00000496172 LRPPRCP42704 1394 aaKnown RBP15.33■□□□□ 0.04
ERGIC3-219ENST00000496172 KIF1AQ12756 1690 aa15.32■□□□□ 0.04
ERGIC3-219ENST00000496172 PLCH1Q4KWH8 1693 aa15.32■□□□□ 0.04
ERGIC3-219ENST00000496172 IFT172Q9UG01 1749 aa15.31■□□□□ 0.04
ERGIC3-219ENST00000496172 ONECUT3O60422 494 aaPredicted RBP15.31■□□□□ 0.04
ERGIC3-219ENST00000496172 STK26Q9P289 416 aa15.31■□□□□ 0.04
ERGIC3-219ENST00000496172 PIK3C2GO75747 1445 aa15.31■□□□□ 0.04
ERGIC3-219ENST00000496172 RGPD1P0DJD0 1748 aa15.3■□□□□ 0.04
ERGIC3-219ENST00000496172 ABCA3Q99758 1704 aa15.29■□□□□ 0.04
ERGIC3-219ENST00000496172 TMEM132EQ6IEE7 984 aa15.29■□□□□ 0.04
ERGIC3-219ENST00000496172 C14orf93Q9H972 538 aaKnown RBP15.29■□□□□ 0.04
ERGIC3-219ENST00000496172 VPS72Q15906 364 aa15.28■□□□□ 0.04
ERGIC3-219ENST00000496172 ESCO1Q5FWF5 840 aa15.28■□□□□ 0.04
ERGIC3-219ENST00000496172 SEPT12Q8IYM1 358 aa15.28■□□□□ 0.04
ERGIC3-219ENST00000496172 STAC3Q96MF2 364 aa15.28■□□□□ 0.04
ERGIC3-219ENST00000496172 DISP2A7MBM2 1401 aa15.27■□□□□ 0.04
ERGIC3-219ENST00000496172 TECPR2O15040 1411 aa15.27■□□□□ 0.04
ERGIC3-219ENST00000496172 ABCC11Q96J66 1382 aa15.27■□□□□ 0.04
ERGIC3-219ENST00000496172 SPATA31A3Q5VYP0 1347 aa15.27■□□□□ 0.04
ERGIC3-219ENST00000496172 FMN2Q9NZ56 1722 aa15.27■□□□□ 0.04
ERGIC3-219ENST00000496172 KNDC1Q76NI1 1749 aa15.26■□□□□ 0.03
ERGIC3-219ENST00000496172 DHX57Q6P158 1386 aaKnown RBP15.26■□□□□ 0.03
ERGIC3-219ENST00000496172 FOXO3O43524 673 aa15.26■□□□□ 0.03
ERGIC3-219ENST00000496172 BAG6P46379 1132 aa15.26■□□□□ 0.03
ERGIC3-219ENST00000496172 CFAP70Q5T0N1 1121 aa15.26■□□□□ 0.03
ERGIC3-219ENST00000496172 DCAF11Q8TEB1 546 aa15.26■□□□□ 0.03
ERGIC3-219ENST00000496172 KDM2AQ9Y2K7 1162 aa15.26■□□□□ 0.03
ERGIC3-219ENST00000496172 NRXN1Q9ULB1 1477 aa15.26■□□□□ 0.03
ERGIC3-219ENST00000496172 KRT27Q7Z3Y8 459 aa15.25■□□□□ 0.03
ERGIC3-219ENST00000496172 WAPLQ7Z5K2 1190 aa15.25■□□□□ 0.03
ERGIC3-219ENST00000496172 NRAPQ86VF7 1730 aa15.25■□□□□ 0.03
ERGIC3-219ENST00000496172 TNS1Q9HBL0 1735 aaKnown RBP15.25■□□□□ 0.03
ERGIC3-219ENST00000496172 YTHDC2Q9H6S0 1430 aaKnown RBP15.25■□□□□ 0.03
ERGIC3-219ENST00000496172 PSDA5PKW4 1024 aaPredicted RBP15.24■□□□□ 0.03
ERGIC3-219ENST00000496172 SIRT1Q96EB6 747 aa15.24■□□□□ 0.03
ERGIC3-219ENST00000496172 XPCQ01831 940 aaPredicted RBP15.23■□□□□ 0.03
ERGIC3-219ENST00000496172 TNS3Q68CZ2 1445 aa15.23■□□□□ 0.03
ERGIC3-219ENST00000496172 ADGRB2O60241 1585 aa15.2■□□□□ 0.02
ERGIC3-219ENST00000496172 POGKQ9P215 609 aa15.2■□□□□ 0.02
ERGIC3-219ENST00000496172 THSD7AQ9UPZ6 1657 aa15.19■□□□□ 0.02
ERGIC3-219ENST00000496172 PLEKHH1Q9ULM0 1364 aa15.19■□□□□ 0.02
ERGIC3-219ENST00000496172 PRAM1Q96QH2 718 aa15.18■□□□□ 0.02
ERGIC3-219ENST00000496172 SBNO1A3KN83 1393 aa15.18■□□□□ 0.02
ERGIC3-219ENST00000496172 RGPD8O14715 1765 aaPredicted RBP15.16■□□□□ 0.02
ERGIC3-219ENST00000496172 ARHGEF10O15013 1369 aa15.16■□□□□ 0.02
ERGIC3-219ENST00000496172 NUTM2FA1L443 756 aa15.16■□□□□ 0.02
ERGIC3-219ENST00000496172 SAFB2Q14151 953 aaKnown RBP eCLIP15.16■□□□□ 0.02
ERGIC3-219ENST00000496172 TRAK1Q9UPV9 953 aa15.16■□□□□ 0.02
ERGIC3-219ENST00000496172 COL14A1Q05707 1796 aaKnown RBP15.16■□□□□ 0.02
ERGIC3-219ENST00000496172 RREB1Q92766 1687 aa15.16■□□□□ 0.02
ERGIC3-219ENST00000496172 PARD3Q8TEW0 1356 aa15.15■□□□□ 0.02
ERGIC3-219ENST00000496172 DLC1Q96QB1 1528 aa15.14■□□□□ 0.01
ERGIC3-219ENST00000496172 YY1P25490 414 aa15.14■□□□□ 0.01
ERGIC3-219ENST00000496172 EN1Q05925 392 aaPredicted RBP15.14■□□□□ 0.01
ERGIC3-219ENST00000496172 R3HDM1Q15032 1099 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-219ENST00000496172 KRT28Q7Z3Y7 464 aa15.14■□□□□ 0.01
ERGIC3-219ENST00000496172 CCDC9Q9Y3X0 531 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-219ENST00000496172 ADGRB1O14514 1584 aa15.13■□□□□ 0.01
ERGIC3-219ENST00000496172 TRPM3Q9HCF6 1732 aaPredicted RBP15.12■□□□□ 0.01
ERGIC3-219ENST00000496172 HAP1P54257 671 aaPredicted RBP15.12■□□□□ 0.01
ERGIC3-219ENST00000496172 PSME1Q06323 249 aa15.12■□□□□ 0.01
ERGIC3-219ENST00000496172 ALS2Q96Q42 1657 aa15.12■□□□□ 0.01
ERGIC3-219ENST00000496172 NUP188Q5SRE5 1749 aa15.12■□□□□ 0.01
ERGIC3-219ENST00000496172 CRYBG1Q9Y4K1 1723 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms