RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 ASXL2Q76L83 1435 aa26.11■■□□□ 1.77
LYSMD4-209ENST00000496108 SHPRHQ149N8 1683 aa26.11■■□□□ 1.77
LYSMD4-209ENST00000496108 MCM4P33991 863 aa26.11■■□□□ 1.77
LYSMD4-209ENST00000496108 DIP2BQ9P265 1576 aa26.1■■□□□ 1.77
LYSMD4-209ENST00000496108 KANK1Q14678 1352 aa26.1■■□□□ 1.77
LYSMD4-209ENST00000496108 ABCC1P33527 1531 aa26.1■■□□□ 1.77
LYSMD4-209ENST00000496108 XRCC6P12956 609 aaKnown RBP eCLIP26.1■■□□□ 1.77
LYSMD4-209ENST00000496108 WDR63Q8IWG1 891 aa26.1■■□□□ 1.77
LYSMD4-209ENST00000496108 MYOM2P54296 1465 aa26.09■■□□□ 1.77
LYSMD4-209ENST00000496108 PLCH2O75038 1416 aa26.09■■□□□ 1.77
LYSMD4-209ENST00000496108 SBNO2Q9Y2G9 1366 aa26.09■■□□□ 1.77
LYSMD4-209ENST00000496108 RUNDC1Q96C34 613 aa26.08■■□□□ 1.77
LYSMD4-209ENST00000496108 DEPDC5O75140 1603 aa26.08■■□□□ 1.77
LYSMD4-209ENST00000496108 TET3O43151 1660 aa26.07■■□□□ 1.76
LYSMD4-209ENST00000496108 MYO3AQ8NEV4 1616 aa26.07■■□□□ 1.76
LYSMD4-209ENST00000496108 RLBP1P12271 317 aa26.07■■□□□ 1.76
LYSMD4-209ENST00000496108 NCBP3Q53F19 620 aaKnown RBP26.06■■□□□ 1.76
LYSMD4-209ENST00000496108 CHMP5Q9NZZ3 219 aa26.06■■□□□ 1.76
LYSMD4-209ENST00000496108 RTEL1-TNFRSF6BF6WH68 1400 aa26.06■■□□□ 1.76
LYSMD4-209ENST00000496108 CLCN1P35523 988 aa26.06■■□□□ 1.76
LYSMD4-209ENST00000496108 CCDC27Q2M243 656 aa26.06■■□□□ 1.76
LYSMD4-209ENST00000496108 MAP3K4Q9Y6R4 1608 aa26.06■■□□□ 1.76
LYSMD4-209ENST00000496108 FAM69CQ0P6D2 419 aa26.03■■□□□ 1.76
LYSMD4-209ENST00000496108 ABCA6Q8N139 1617 aa26.03■■□□□ 1.76
LYSMD4-209ENST00000496108 EFCAB2Q5VUJ9 269 aa26.02■■□□□ 1.76
LYSMD4-209ENST00000496108 TRAPPC8Q9Y2L5 1435 aa26.02■■□□□ 1.76
LYSMD4-209ENST00000496108 ISY1Q9ULR0 285 aaKnown RBP26.01■■□□□ 1.75
LYSMD4-209ENST00000496108 TCP11L2Q8N4U5 519 aa26■■□□□ 1.75
LYSMD4-209ENST00000496108 VWDEQ8N2E2 1590 aa26■■□□□ 1.75
LYSMD4-209ENST00000496108 MRE11P49959 708 aa26■■□□□ 1.75
LYSMD4-209ENST00000496108 MVPQ14764 893 aaKnown RBP26■■□□□ 1.75
LYSMD4-209ENST00000496108 C22orf23Q9BZE7 217 aa25.99■■□□□ 1.75
LYSMD4-209ENST00000496108 TRAK2O60296 914 aa25.98■■□□□ 1.75
LYSMD4-209ENST00000496108 PNNQ9H307 717 aaKnown RBP25.98■■□□□ 1.75
LYSMD4-209ENST00000496108 TNNQ9UQP3 1299 aa25.98■■□□□ 1.75
LYSMD4-209ENST00000496108 ZFYVE16Q7Z3T8 1539 aa25.98■■□□□ 1.75
LYSMD4-209ENST00000496108 MYH16Q9H6N6 1097 aa25.97■■□□□ 1.75
LYSMD4-209ENST00000496108 DDX11L8A8MPP1 907 aa25.96■■□□□ 1.75
LYSMD4-209ENST00000496108 CFAP70Q5T0N1 1121 aa25.96■■□□□ 1.75
LYSMD4-209ENST00000496108 NSD3Q9BZ95 1437 aa25.96■■□□□ 1.75
LYSMD4-209ENST00000496108 USP32Q8NFA0 1604 aa25.96■■□□□ 1.75
LYSMD4-209ENST00000496108 MORC1Q86VD1 984 aa25.96■■□□□ 1.75
LYSMD4-209ENST00000496108 TSPOAP1O95153 1857 aa25.96■■□□□ 1.75
LYSMD4-209ENST00000496108 CT47B1P0C2W7 299 aaPredicted RBP25.95■■□□□ 1.75
LYSMD4-209ENST00000496108 ZNF518AQ6AHZ1 1483 aa25.95■■□□□ 1.74
LYSMD4-209ENST00000496108 PANK2Q9BZ23 570 aa25.95■■□□□ 1.74
LYSMD4-209ENST00000496108 NRXN1Q9ULB1 1477 aa25.95■■□□□ 1.74
LYSMD4-209ENST00000496108 SPAG9O60271 1321 aaKnown RBP25.94■■□□□ 1.74
LYSMD4-209ENST00000496108 NCOA3Q9Y6Q9 1424 aa25.94■■□□□ 1.74
LYSMD4-209ENST00000496108 NEUROD2Q15784 382 aa25.94■■□□□ 1.74
LYSMD4-209ENST00000496108 RRP7AQ9Y3A4 280 aaKnown RBP25.94■■□□□ 1.74
LYSMD4-209ENST00000496108 GLI2P10070 1586 aa25.94■■□□□ 1.74
LYSMD4-209ENST00000496108 ADGRL1O94910 1474 aa25.94■■□□□ 1.74
LYSMD4-209ENST00000496108 ZKSCAN2Q63HK3 967 aa25.93■■□□□ 1.74
LYSMD4-209ENST00000496108 HDAC1Q13547 482 aaPredicted RBP25.92■■□□□ 1.74
LYSMD4-209ENST00000496108 IFT172Q9UG01 1749 aa25.92■■□□□ 1.74
LYSMD4-209ENST00000496108 BCL2L13Q9BXK5 485 aa25.92■■□□□ 1.74
LYSMD4-209ENST00000496108 GZF1Q9H116 711 aaPredicted RBP25.92■■□□□ 1.74
LYSMD4-209ENST00000496108 ZNF692Q9BU19 519 aaPredicted RBP25.91■■□□□ 1.74
LYSMD4-209ENST00000496108 SETBP1Q9Y6X0 1596 aa25.91■■□□□ 1.74
LYSMD4-209ENST00000496108 GLIPR1L2Q4G1C9 344 aa25.9■■□□□ 1.74
LYSMD4-209ENST00000496108 HSCBQ8IWL3 235 aa25.9■■□□□ 1.74
LYSMD4-209ENST00000496108 DZIP1LQ8IYY4 767 aaKnown RBP25.9■■□□□ 1.74
LYSMD4-209ENST00000496108 SPRYD3Q8NCJ5 442 aa25.9■■□□□ 1.74
LYSMD4-209ENST00000496108 ARAP3Q8WWN8 1544 aa25.9■■□□□ 1.74
LYSMD4-209ENST00000496108 ADGRF5Q8IZF2 1346 aa25.9■■□□□ 1.74
LYSMD4-209ENST00000496108 ADGRB2O60241 1585 aa25.89■■□□□ 1.74
LYSMD4-209ENST00000496108 MFAP1P55081 439 aaKnown RBP25.89■■□□□ 1.74
LYSMD4-209ENST00000496108 CFAP53Q96M91 514 aa25.89■■□□□ 1.74
LYSMD4-209ENST00000496108 NAP1L5Q96NT1 182 aaPredicted RBP25.89■■□□□ 1.74
LYSMD4-209ENST00000496108 DDIT3P35638 169 aa25.88■■□□□ 1.73
LYSMD4-209ENST00000496108 FTSJ3Q8IY81 847 aaKnown RBP25.88■■□□□ 1.73
LYSMD4-209ENST00000496108 ARXQ96QS3 562 aa25.88■■□□□ 1.73
LYSMD4-209ENST00000496108 GRPEL1Q9HAV7 217 aa25.88■■□□□ 1.73
LYSMD4-209ENST00000496108 SNX21Q969T3 373 aa25.86■■□□□ 1.73
LYSMD4-209ENST00000496108 KIF1BO60333 1816 aa25.85■■□□□ 1.73
LYSMD4-209ENST00000496108 ZC3H13Q5T200 1668 aaKnown RBP25.84■■□□□ 1.73
LYSMD4-209ENST00000496108 SMC5Q8IY18 1101 aa25.84■■□□□ 1.73
LYSMD4-209ENST00000496108 CIZ1Q9ULV3 898 aaPredicted RBP25.84■■□□□ 1.73
LYSMD4-209ENST00000496108 RBM25P49756 843 aaKnown RBP25.84■■□□□ 1.73
LYSMD4-209ENST00000496108 DDX19BQ9UMR2 479 aa25.84■■□□□ 1.73
LYSMD4-209ENST00000496108 INO80Q9ULG1 1556 aaPredicted RBP25.83■■□□□ 1.73
LYSMD4-209ENST00000496108 RRP9O43818 475 aaKnown RBP25.83■■□□□ 1.72
LYSMD4-209ENST00000496108 MTHFSP49914 203 aa25.82■■□□□ 1.72
LYSMD4-209ENST00000496108 PPRC1Q5VV67 1664 aaKnown RBP25.82■■□□□ 1.72
LYSMD4-209ENST00000496108 UGGT1Q9NYU2 1555 aa25.82■■□□□ 1.72
LYSMD4-209ENST00000496108 HSP90AA1P07900 732 aaKnown RBP25.81■■□□□ 1.72
LYSMD4-209ENST00000496108 PTMSP20962 102 aa25.81■■□□□ 1.72
LYSMD4-209ENST00000496108 NSD2O96028 1365 aa25.81■■□□□ 1.72
LYSMD4-209ENST00000496108 ESPNB1AK53 854 aa25.8■■□□□ 1.72
LYSMD4-209ENST00000496108 TNNT2P45379 298 aaPredicted RBP25.8■■□□□ 1.72
LYSMD4-209ENST00000496108 ATP7AQ04656 1500 aa25.79■■□□□ 1.72
LYSMD4-209ENST00000496108 MROH1Q8NDA8 1641 aa25.79■■□□□ 1.72
LYSMD4-209ENST00000496108 AFAP1Q8N556 730 aa25.79■■□□□ 1.72
LYSMD4-209ENST00000496108 TRIM27P14373 513 aa25.78■■□□□ 1.72
LYSMD4-209ENST00000496108 SLC12A5Q9H2X9 1139 aa25.78■■□□□ 1.72
LYSMD4-209ENST00000496108 EFCAB6Q5THR3 1501 aa25.78■■□□□ 1.72
LYSMD4-209ENST00000496108 MROH2AA6NES4 1674 aa25.78■■□□□ 1.72
LYSMD4-209ENST00000496108 QRICH2Q9H0J4 1663 aa25.78■■□□□ 1.72
LYSMD4-209ENST00000496108 SKOR2Q2VWA4 1001 aaPredicted RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms