RNA–Protein interactions for RNA: ENST00000496100.1

U2SURP-216, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 4

Gene U2SURP, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-216ENST00000496100 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.4□□□□□ -0.9
U2SURP-216ENST00000496100 FMNL1O95466 1100 aaPredicted RBP9.39□□□□□ -0.91
U2SURP-216ENST00000496100 ADH1BP00325 375 aa9.39□□□□□ -0.91
U2SURP-216ENST00000496100 NDUFV2P19404 249 aa9.39□□□□□ -0.91
U2SURP-216ENST00000496100 ZNF516Q92618 1163 aa9.39□□□□□ -0.91
U2SURP-216ENST00000496100 PCDHGC3Q9UN70 934 aa9.39□□□□□ -0.91
U2SURP-216ENST00000496100 MSS51Q4VC12 460 aa9.38□□□□□ -0.91
U2SURP-216ENST00000496100 LIMD1Q9UGP4 676 aa9.38□□□□□ -0.91
U2SURP-216ENST00000496100 HLA-CQ95604 372 aa9.37□□□□□ -0.91
U2SURP-216ENST00000496100 SPSB2Q99619 263 aa9.37□□□□□ -0.91
U2SURP-216ENST00000496100 LILRB3O75022 631 aa9.36□□□□□ -0.91
U2SURP-216ENST00000496100 PPP2R2DQ66LE6 453 aa9.36□□□□□ -0.91
U2SURP-216ENST00000496100 RETREG3Q86VR2 466 aa9.36□□□□□ -0.91
U2SURP-216ENST00000496100 GUCA2AQ02747 115 aa9.35□□□□□ -0.91
U2SURP-216ENST00000496100 MTMR2Q13614 643 aa9.35□□□□□ -0.91
U2SURP-216ENST00000496100 RNF19BQ6ZMZ0 732 aa9.35□□□□□ -0.91
U2SURP-216ENST00000496100 ERICH6Q7L0X2 663 aa9.35□□□□□ -0.91
U2SURP-216ENST00000496100 USB1Q9BQ65 265 aaKnown RBP9.35□□□□□ -0.91
U2SURP-216ENST00000496100 ZBTB3Q9H5J0 574 aa9.35□□□□□ -0.91
U2SURP-216ENST00000496100 PCDHB15Q9Y5E8 787 aa9.35□□□□□ -0.91
U2SURP-216ENST00000496100 DESI1Q6ICB0 168 aa9.34□□□□□ -0.91
U2SURP-216ENST00000496100 HRCP23327 699 aa9.33□□□□□ -0.92
U2SURP-216ENST00000496100 A0A0G2JS52 829 aa9.32□□□□□ -0.92
U2SURP-216ENST00000496100 TLL1O43897 1013 aa9.32□□□□□ -0.92
U2SURP-216ENST00000496100 MMP16P51512 607 aa9.32□□□□□ -0.92
U2SURP-216ENST00000496100 FAM160A2Q8N612 972 aaPredicted RBP9.32□□□□□ -0.92
U2SURP-216ENST00000496100 PCMTD1Q96MG8 357 aaPredicted RBP9.32□□□□□ -0.92
U2SURP-216ENST00000496100 SLC6A16Q9GZN6 736 aa9.32□□□□□ -0.92
U2SURP-216ENST00000496100 POLR3EQ9NVU0 708 aa9.32□□□□□ -0.92
U2SURP-216ENST00000496100 NKX2-3Q8TAU0 364 aa9.31□□□□□ -0.92
U2SURP-216ENST00000496100 GGCXP38435 758 aa9.3□□□□□ -0.92
U2SURP-216ENST00000496100 C6orf229H3BNL8 230 aa9.29□□□□□ -0.92
U2SURP-216ENST00000496100 DXOO77932 396 aaKnown RBP9.29□□□□□ -0.92
U2SURP-216ENST00000496100 PROCA1Q8NCQ7 364 aaPredicted RBP9.29□□□□□ -0.92
U2SURP-216ENST00000496100 ATP1B4Q9UN42 357 aaPredicted RBP9.29□□□□□ -0.92
U2SURP-216ENST00000496100 QPCTQ16769 361 aa9.28□□□□□ -0.92
U2SURP-216ENST00000496100 SYMPKQ92797 1274 aaKnown RBP9.28□□□□□ -0.92
U2SURP-216ENST00000496100 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.28□□□□□ -0.92
U2SURP-216ENST00000496100 RGS20O76081 388 aa9.27□□□□□ -0.93
U2SURP-216ENST00000496100 JUNDP17535 347 aa9.27□□□□□ -0.93
U2SURP-216ENST00000496100 PPP1R18Q6NYC8 613 aa9.27□□□□□ -0.93
U2SURP-216ENST00000496100 ANKLE1Q8NAG6 615 aa9.27□□□□□ -0.93
U2SURP-216ENST00000496100 PRR7Q8TB68 274 aa9.27□□□□□ -0.93
U2SURP-216ENST00000496100 CABLES1Q8TDN4 633 aa9.26□□□□□ -0.93
U2SURP-216ENST00000496100 CFAP99D6REC4 459 aa9.25□□□□□ -0.93
U2SURP-216ENST00000496100 S1PR4O95977 384 aa9.25□□□□□ -0.93
U2SURP-216ENST00000496100 NUTM2BA6NNL0 878 aaPredicted RBP9.24□□□□□ -0.93
U2SURP-216ENST00000496100 NUTM2EB1AL46 878 aaPredicted RBP9.24□□□□□ -0.93
U2SURP-216ENST00000496100 RNF223E7ERA6 249 aa9.24□□□□□ -0.93
U2SURP-216ENST00000496100 SOCS7O14512 581 aa9.24□□□□□ -0.93
U2SURP-216ENST00000496100 PTPRNQ16849 979 aa9.24□□□□□ -0.93
U2SURP-216ENST00000496100 RTL5Q5HYW3 569 aaPredicted RBP9.24□□□□□ -0.93
U2SURP-216ENST00000496100 NUTM2DQ5VT03 806 aaPredicted RBP9.24□□□□□ -0.93
U2SURP-216ENST00000496100 NUTM2AQ8IVF1 878 aaPredicted RBP9.24□□□□□ -0.93
U2SURP-216ENST00000496100 RFC5P40937 340 aa9.23□□□□□ -0.93
U2SURP-216ENST00000496100 CSPP1Q1MSJ5 1256 aa9.23□□□□□ -0.93
U2SURP-216ENST00000496100 TMEM259Q4ZIN3 620 aa9.23□□□□□ -0.93
U2SURP-216ENST00000496100 FBXO31Q5XUX0 539 aaPredicted RBP9.23□□□□□ -0.93
U2SURP-216ENST00000496100 LYPD8Q6UX82 237 aa9.23□□□□□ -0.93
U2SURP-216ENST00000496100 HELBQ8NG08 1087 aaPredicted RBP9.22□□□□□ -0.93
U2SURP-216ENST00000496100 PRDM9Q9NQV7 894 aa9.22□□□□□ -0.93
U2SURP-216ENST00000496100 BANK1Q8NDB2 785 aa9.21□□□□□ -0.94
U2SURP-216ENST00000496100 SUPT5HO00267 1087 aaKnown RBP9.2□□□□□ -0.94
U2SURP-216ENST00000496100 EVA1BQ9NVM1 165 aa9.19□□□□□ -0.94
U2SURP-216ENST00000496100 CCNYL3P0C7X3 344 aa9.18□□□□□ -0.94
U2SURP-216ENST00000496100 NUDT12Q9BQG2 462 aa9.18□□□□□ -0.94
U2SURP-216ENST00000496100 FCF1Q9Y324 198 aaKnown RBP9.18□□□□□ -0.94
U2SURP-216ENST00000496100 V9GY48 417 aaPredicted RBP9.18□□□□□ -0.94
U2SURP-216ENST00000496100 F12P00748 615 aaPredicted RBP9.17□□□□□ -0.94
U2SURP-216ENST00000496100 RPIAP49247 311 aa9.17□□□□□ -0.94
U2SURP-216ENST00000496100 FLIIQ13045 1269 aa9.16□□□□□ -0.94
U2SURP-216ENST00000496100 ZMYND15Q9H091 742 aa9.16□□□□□ -0.94
U2SURP-216ENST00000496100 PPEF1O14829 653 aaPredicted RBP9.15□□□□□ -0.94
U2SURP-216ENST00000496100 CTDSPL2Q05D32 466 aa9.15□□□□□ -0.94
U2SURP-216ENST00000496100 PER1O15534 1290 aaPredicted RBP9.14□□□□□ -0.95
U2SURP-216ENST00000496100 KCNH2Q12809 1159 aa9.14□□□□□ -0.95
U2SURP-216ENST00000496100 PLA2G2CQ5R387 149 aa9.14□□□□□ -0.95
U2SURP-216ENST00000496100 EMID1Q96A84 441 aaPredicted RBP9.13□□□□□ -0.95
U2SURP-216ENST00000496100 AP1G2O75843 785 aa9.12□□□□□ -0.95
U2SURP-216ENST00000496100 USP17L8P0C7I0 530 aa9.12□□□□□ -0.95
U2SURP-216ENST00000496100 MCM6Q14566 821 aa9.12□□□□□ -0.95
U2SURP-216ENST00000496100 SLC19A1P41440 591 aa9.1□□□□□ -0.95
U2SURP-216ENST00000496100 LIAT1Q6ZQX7 453 aa9.1□□□□□ -0.95
U2SURP-216ENST00000496100 ZBTB24O43167 697 aaPredicted RBP9.09□□□□□ -0.95
U2SURP-216ENST00000496100 SPRYD7Q5W111 196 aa9.09□□□□□ -0.95
U2SURP-216ENST00000496100 ARMC2Q8NEN0 867 aa9.09□□□□□ -0.95
U2SURP-216ENST00000496100 TSC1Q92574 1164 aa9.09□□□□□ -0.95
U2SURP-216ENST00000496100 GPKOWQ92917 476 aaPredicted RBP eCLIP9.09□□□□□ -0.95
U2SURP-216ENST00000496100 CLUAP1Q96AJ1 413 aa9.09□□□□□ -0.95
U2SURP-216ENST00000496100 ZC3H4Q9UPT8 1303 aaKnown RBP9.08□□□□□ -0.96
U2SURP-216ENST00000496100 APBB1O00213 710 aa9.08□□□□□ -0.96
U2SURP-216ENST00000496100 CD2BP2O95400 341 aaKnown RBP9.08□□□□□ -0.96
U2SURP-216ENST00000496100 UBTFP17480 764 aaKnown RBP9.08□□□□□ -0.96
U2SURP-216ENST00000496100 PTCRAQ6ISU1 281 aaPredicted RBP9.08□□□□□ -0.96
U2SURP-216ENST00000496100 LRRN4Q8WUT4 740 aa9.08□□□□□ -0.96
U2SURP-216ENST00000496100 PRKD2Q9BZL6 878 aa9.08□□□□□ -0.96
U2SURP-216ENST00000496100 UNC93B1Q9H1C4 597 aa9.08□□□□□ -0.96
U2SURP-216ENST00000496100 WNT7BP56706 349 aa9.07□□□□□ -0.96
U2SURP-216ENST00000496100 TRIM32Q13049 653 aa9.07□□□□□ -0.96
U2SURP-216ENST00000496100 ZNF598Q86UK7 904 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms