RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 L3MBTL2Q969R5 705 aa17.26■□□□□ 0.35
APTX-233ENST00000496030 MST1RQ04912 1400 aa17.26■□□□□ 0.35
APTX-233ENST00000496030 AMOTL2Q9Y2J4 779 aa17.25■□□□□ 0.35
APTX-233ENST00000496030 ATAD2Q6PL18 1390 aa17.25■□□□□ 0.35
APTX-233ENST00000496030 PIK3R4Q99570 1358 aa17.25■□□□□ 0.35
APTX-233ENST00000496030 CLSPNQ9HAW4 1339 aa17.24■□□□□ 0.35
APTX-233ENST00000496030 PIK3C2GO75747 1445 aa17.24■□□□□ 0.35
APTX-233ENST00000496030 DCCP43146 1447 aa17.24■□□□□ 0.35
APTX-233ENST00000496030 STAC3Q96MF2 364 aa17.24■□□□□ 0.35
APTX-233ENST00000496030 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
APTX-233ENST00000496030 KDM2AQ9Y2K7 1162 aa17.24■□□□□ 0.35
APTX-233ENST00000496030 LRRC59Q96AG4 307 aaKnown RBP17.23■□□□□ 0.35
APTX-233ENST00000496030 XRN1Q8IZH2 1706 aaKnown RBP17.23■□□□□ 0.35
APTX-233ENST00000496030 METP08581 1390 aa17.23■□□□□ 0.35
APTX-233ENST00000496030 ADAMTS2O95450 1211 aa17.22■□□□□ 0.35
APTX-233ENST00000496030 CCER1Q8TC90 406 aaPredicted RBP17.21■□□□□ 0.35
APTX-233ENST00000496030 NGLY1Q96IV0 654 aa17.21■□□□□ 0.35
APTX-233ENST00000496030 C14orf93Q9H972 538 aaKnown RBP17.21■□□□□ 0.35
APTX-233ENST00000496030 CFAP70Q5T0N1 1121 aa17.19■□□□□ 0.34
APTX-233ENST00000496030 NALCNQ8IZF0 1738 aa17.17■□□□□ 0.34
APTX-233ENST00000496030 PRAG1Q86YV5 1406 aa17.16■□□□□ 0.34
APTX-233ENST00000496030 USP21Q9UK80 565 aa17.16■□□□□ 0.34
APTX-233ENST00000496030 TMEM132EQ6IEE7 984 aa17.15■□□□□ 0.34
APTX-233ENST00000496030 ATRNO75882 1429 aa17.14■□□□□ 0.33
APTX-233ENST00000496030 LAMC1P11047 1609 aa17.14■□□□□ 0.33
APTX-233ENST00000496030 TONSLQ96HA7 1378 aa17.14■□□□□ 0.33
APTX-233ENST00000496030 NBPF8Q3BBV2 869 aa17.13■□□□□ 0.33
APTX-233ENST00000496030 TRPC5Q9UL62 973 aaPredicted RBP17.13■□□□□ 0.33
APTX-233ENST00000496030 ADGRB1O14514 1584 aa17.13■□□□□ 0.33
APTX-233ENST00000496030 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
APTX-233ENST00000496030 FNBP4Q8N3X1 1017 aaPredicted RBP17.11■□□□□ 0.33
APTX-233ENST00000496030 TIMELESSQ9UNS1 1208 aa17.11■□□□□ 0.33
APTX-233ENST00000496030 KIAA1210Q9ULL0 1709 aa17.1■□□□□ 0.33
APTX-233ENST00000496030 NBPF1Q3BBV0 1214 aa17.1■□□□□ 0.33
APTX-233ENST00000496030 LRPPRCP42704 1394 aaKnown RBP17.1■□□□□ 0.33
APTX-233ENST00000496030 ABCC11Q96J66 1382 aa17.1■□□□□ 0.33
APTX-233ENST00000496030 C1orf167Q5SNV9 1468 aa17.1■□□□□ 0.33
APTX-233ENST00000496030 ROBO2Q9HCK4 1378 aa17.09■□□□□ 0.33
APTX-233ENST00000496030 PTCH1Q13635 1447 aa17.09■□□□□ 0.33
APTX-233ENST00000496030 YTHDC2Q9H6S0 1430 aaKnown RBP17.09■□□□□ 0.33
APTX-233ENST00000496030 COL22A1Q8NFW1 1626 aaPredicted RBP17.08■□□□□ 0.32
APTX-233ENST00000496030 TECPR2O15040 1411 aa17.08■□□□□ 0.32
APTX-233ENST00000496030 CCDC125Q86Z20 511 aa17.08■□□□□ 0.32
APTX-233ENST00000496030 STK26Q9P289 416 aa17.08■□□□□ 0.32
APTX-233ENST00000496030 BCL9LQ86UU0 1499 aa17.07■□□□□ 0.32
APTX-233ENST00000496030 SOS2Q07890 1332 aaPredicted RBP17.07■□□□□ 0.32
APTX-233ENST00000496030 LRP5O75197 1615 aa17.07■□□□□ 0.32
APTX-233ENST00000496030 ORAI2Q96SN7 254 aa17.06■□□□□ 0.32
APTX-233ENST00000496030 TRPM1Q7Z4N2 1603 aa17.06■□□□□ 0.32
APTX-233ENST00000496030 MARF1Q9Y4F3 1742 aaKnown RBP17.05■□□□□ 0.32
APTX-233ENST00000496030 SIRT1Q96EB6 747 aa17.05■□□□□ 0.32
APTX-233ENST00000496030 KNDC1Q76NI1 1749 aa17.04■□□□□ 0.32
APTX-233ENST00000496030 BRWD3Q6RI45 1802 aa17.03■□□□□ 0.32
APTX-233ENST00000496030 WAPLQ7Z5K2 1190 aa17.03■□□□□ 0.32
APTX-233ENST00000496030 DEFB132Q7Z7B7 95 aa17.03■□□□□ 0.32
APTX-233ENST00000496030 PLEKHH1Q9ULM0 1364 aa17.02■□□□□ 0.32
APTX-233ENST00000496030 BLMP54132 1417 aaPredicted RBP17.02■□□□□ 0.31
APTX-233ENST00000496030 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.31
APTX-233ENST00000496030 DLC1Q96QB1 1528 aa17.01■□□□□ 0.31
APTX-233ENST00000496030 TRAK1Q9UPV9 953 aa17.01■□□□□ 0.31
APTX-233ENST00000496030 GLI3P10071 1580 aa17.01■□□□□ 0.31
APTX-233ENST00000496030 GJD4Q96KN9 370 aaPredicted RBP17■□□□□ 0.31
APTX-233ENST00000496030 RALGAPBQ86X10 1494 aa16.99■□□□□ 0.31
APTX-233ENST00000496030 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.99■□□□□ 0.31
APTX-233ENST00000496030 PRAM1Q96QH2 718 aa16.98■□□□□ 0.31
APTX-233ENST00000496030 ROCK2O75116 1388 aaKnown RBP16.97■□□□□ 0.31
APTX-233ENST00000496030 ARHGEF28Q8N1W1 1705 aaKnown RBP16.96■□□□□ 0.31
APTX-233ENST00000496030 PXDNQ92626 1479 aa16.96■□□□□ 0.31
APTX-233ENST00000496030 PSDA5PKW4 1024 aaPredicted RBP16.94■□□□□ 0.3
APTX-233ENST00000496030 XPCQ01831 940 aaPredicted RBP16.93■□□□□ 0.3
APTX-233ENST00000496030 SAFB2Q14151 953 aaKnown RBP eCLIP16.93■□□□□ 0.3
APTX-233ENST00000496030 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
APTX-233ENST00000496030 POGKQ9P215 609 aa16.93■□□□□ 0.3
APTX-233ENST00000496030 SLIT2O94813 1529 aa16.92■□□□□ 0.3
APTX-233ENST00000496030 UNC5CLQ8IV45 518 aa16.9■□□□□ 0.3
APTX-233ENST00000496030 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
APTX-233ENST00000496030 MINK1Q8N4C8 1332 aaPredicted RBP16.89■□□□□ 0.29
APTX-233ENST00000496030 CENPJQ9HC77 1338 aaPredicted RBP16.89■□□□□ 0.29
APTX-233ENST00000496030 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.29
APTX-233ENST00000496030 FOXO3O43524 673 aa16.88■□□□□ 0.29
APTX-233ENST00000496030 SF3B2Q13435 895 aaKnown RBP16.88■□□□□ 0.29
APTX-233ENST00000496030 ESCO1Q5FWF5 840 aa16.88■□□□□ 0.29
APTX-233ENST00000496030 SEPT12Q8IYM1 358 aa16.88■□□□□ 0.29
APTX-233ENST00000496030 ADGRB2O60241 1585 aa16.88■□□□□ 0.29
APTX-233ENST00000496030 HIRIP3Q9BW71 556 aaPredicted RBP16.87■□□□□ 0.29
APTX-233ENST00000496030 USP32Q8NFA0 1604 aa16.86■□□□□ 0.29
APTX-233ENST00000496030 FMN2Q9NZ56 1722 aa16.85■□□□□ 0.29
APTX-233ENST00000496030 QRICH2Q9H0J4 1663 aa16.85■□□□□ 0.29
APTX-233ENST00000496030 WASLO00401 505 aaPredicted RBP16.84■□□□□ 0.29
APTX-233ENST00000496030 PLCH1Q4KWH8 1693 aa16.84■□□□□ 0.29
APTX-233ENST00000496030 ST20-MTHFSA0A0A6YYL1 179 aa16.83■□□□□ 0.28
APTX-233ENST00000496030 EIF3AQ14152 1382 aaKnown RBP16.83■□□□□ 0.28
APTX-233ENST00000496030 TESK2Q96S53 571 aa16.83■□□□□ 0.28
APTX-233ENST00000496030 USP47Q96K76 1375 aa16.82■□□□□ 0.28
APTX-233ENST00000496030 SBNO2Q9Y2G9 1366 aa16.82■□□□□ 0.28
APTX-233ENST00000496030 PRR36Q9H6K5 1346 aa16.82■□□□□ 0.28
APTX-233ENST00000496030 NUTM2FA1L443 756 aa16.82■□□□□ 0.28
APTX-233ENST00000496030 KRT27Q7Z3Y8 459 aa16.82■□□□□ 0.28
APTX-233ENST00000496030 CDK19Q9BWU1 502 aa16.82■□□□□ 0.28
APTX-233ENST00000496030 ONECUT3O60422 494 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms