RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 GLI3P10071 1580 aa20.41■□□□□ 0.86
TFE3-205ENST00000495940 CCDC125Q86Z20 511 aa20.38■□□□□ 0.85
TFE3-205ENST00000495940 BLMP54132 1417 aaPredicted RBP20.37■□□□□ 0.85
TFE3-205ENST00000495940 CLTCL1P53675 1640 aa20.37■□□□□ 0.85
TFE3-205ENST00000495940 APLP2Q06481 763 aa20.36■□□□□ 0.85
TFE3-205ENST00000495940 DEFB132Q7Z7B7 95 aa20.36■□□□□ 0.85
TFE3-205ENST00000495940 ROBO2Q9HCK4 1378 aa20.34■□□□□ 0.85
TFE3-205ENST00000495940 ZNF326Q5BKZ1 582 aaKnown RBP20.34■□□□□ 0.85
TFE3-205ENST00000495940 PXDNQ92626 1479 aa20.34■□□□□ 0.85
TFE3-205ENST00000495940 RALGAPBQ86X10 1494 aa20.33■□□□□ 0.85
TFE3-205ENST00000495940 NUP155O75694 1391 aa20.33■□□□□ 0.84
TFE3-205ENST00000495940 GJD4Q96KN9 370 aaPredicted RBP20.32■□□□□ 0.84
TFE3-205ENST00000495940 KIF1BO60333 1816 aa20.3■□□□□ 0.84
TFE3-205ENST00000495940 CDC42BPGQ6DT37 1551 aa20.29■□□□□ 0.84
TFE3-205ENST00000495940 XPCQ01831 940 aaPredicted RBP20.28■□□□□ 0.84
TFE3-205ENST00000495940 SLIT2O94813 1529 aa20.27■□□□□ 0.84
TFE3-205ENST00000495940 USP32Q8NFA0 1604 aa20.27■□□□□ 0.84
TFE3-205ENST00000495940 PLCH1Q4KWH8 1693 aa20.27■□□□□ 0.84
TFE3-205ENST00000495940 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.83
TFE3-205ENST00000495940 ROCK1Q13464 1354 aa20.25■□□□□ 0.83
TFE3-205ENST00000495940 PSDA5PKW4 1024 aaPredicted RBP20.25■□□□□ 0.83
TFE3-205ENST00000495940 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
TFE3-205ENST00000495940 NPHP3Q7Z494 1330 aa20.25■□□□□ 0.83
TFE3-205ENST00000495940 ABCA3Q99758 1704 aa20.22■□□□□ 0.83
TFE3-205ENST00000495940 HFM1A2PYH4 1435 aa20.21■□□□□ 0.83
TFE3-205ENST00000495940 SF3B2Q13435 895 aaKnown RBP20.21■□□□□ 0.83
TFE3-205ENST00000495940 ESCO1Q5FWF5 840 aa20.21■□□□□ 0.83
TFE3-205ENST00000495940 UNC5CLQ8IV45 518 aa20.21■□□□□ 0.83
TFE3-205ENST00000495940 PPLO60437 1756 aa20.2■□□□□ 0.82
TFE3-205ENST00000495940 NWD2Q9ULI1 1742 aa20.19■□□□□ 0.82
TFE3-205ENST00000495940 FOXO3O43524 673 aa20.19■□□□□ 0.82
TFE3-205ENST00000495940 SEPT12Q8IYM1 358 aa20.18■□□□□ 0.82
TFE3-205ENST00000495940 FMN2Q9NZ56 1722 aa20.17■□□□□ 0.82
TFE3-205ENST00000495940 KIF1AQ12756 1690 aa20.16■□□□□ 0.82
TFE3-205ENST00000495940 NAIPQ13075 1403 aa20.16■□□□□ 0.82
TFE3-205ENST00000495940 NUTM2FA1L443 756 aa20.15■□□□□ 0.82
TFE3-205ENST00000495940 RGPD1P0DJD0 1748 aa20.15■□□□□ 0.82
TFE3-205ENST00000495940 NRAPQ86VF7 1730 aa20.14■□□□□ 0.81
TFE3-205ENST00000495940 TNS1Q9HBL0 1735 aaKnown RBP20.13■□□□□ 0.81
TFE3-205ENST00000495940 RGPD8O14715 1765 aaPredicted RBP20.13■□□□□ 0.81
TFE3-205ENST00000495940 ITGAEP38570 1179 aa20.12■□□□□ 0.81
TFE3-205ENST00000495940 SPATA31A3Q5VYP0 1347 aa20.11■□□□□ 0.81
TFE3-205ENST00000495940 KRT27Q7Z3Y8 459 aa20.11■□□□□ 0.81
TFE3-205ENST00000495940 KNDC1Q76NI1 1749 aa20.1■□□□□ 0.81
TFE3-205ENST00000495940 IFT172Q9UG01 1749 aa20.1■□□□□ 0.81
TFE3-205ENST00000495940 LRPPRCP42704 1394 aaKnown RBP20.1■□□□□ 0.81
TFE3-205ENST00000495940 BAG6P46379 1132 aa20.1■□□□□ 0.81
TFE3-205ENST00000495940 VPS72Q15906 364 aa20.1■□□□□ 0.81
TFE3-205ENST00000495940 CCDC9Q9Y3X0 531 aaKnown RBP20.1■□□□□ 0.81
TFE3-205ENST00000495940 CCDC144AA2RUR9 1427 aa20.1■□□□□ 0.81
TFE3-205ENST00000495940 PLEKHG5O94827 1062 aa20.09■□□□□ 0.81
TFE3-205ENST00000495940 VGFO15240 615 aaPredicted RBP20.07■□□□□ 0.8
TFE3-205ENST00000495940 R3HDM1Q15032 1099 aaKnown RBP20.07■□□□□ 0.8
TFE3-205ENST00000495940 CABLES1Q8TDN4 633 aa20.07■□□□□ 0.8
TFE3-205ENST00000495940 TNS3Q68CZ2 1445 aa20.07■□□□□ 0.8
TFE3-205ENST00000495940 A0A0G2JS52 829 aa20.06■□□□□ 0.8
TFE3-205ENST00000495940 MYT1Q01538 1121 aa20.06■□□□□ 0.8
TFE3-205ENST00000495940 PLEKHH1Q9ULM0 1364 aa20.06■□□□□ 0.8
TFE3-205ENST00000495940 EN1Q05925 392 aaPredicted RBP20.05■□□□□ 0.8
TFE3-205ENST00000495940 TECPR2O15040 1411 aa20.04■□□□□ 0.8
TFE3-205ENST00000495940 ONECUT3O60422 494 aaPredicted RBP20.04■□□□□ 0.8
TFE3-205ENST00000495940 HAP1P54257 671 aaPredicted RBP20.04■□□□□ 0.8
TFE3-205ENST00000495940 WAPLQ7Z5K2 1190 aa20.04■□□□□ 0.8
TFE3-205ENST00000495940 FAM182BQ5T319 152 aa20.02■□□□□ 0.8
TFE3-205ENST00000495940 KRT28Q7Z3Y7 464 aa20.02■□□□□ 0.8
TFE3-205ENST00000495940 THSD7AQ9UPZ6 1657 aa20.01■□□□□ 0.79
TFE3-205ENST00000495940 FAM98CQ17RN3 349 aaKnown RBP20.01■□□□□ 0.79
TFE3-205ENST00000495940 STK26Q9P289 416 aa20.01■□□□□ 0.79
TFE3-205ENST00000495940 DISP2A7MBM2 1401 aa20■□□□□ 0.79
TFE3-205ENST00000495940 ADGRB2O60241 1585 aa20■□□□□ 0.79
TFE3-205ENST00000495940 YY1P25490 414 aa19.99■□□□□ 0.79
TFE3-205ENST00000495940 RPGRIP1LQ68CZ1 1315 aa19.98■□□□□ 0.79
TFE3-205ENST00000495940 COL14A1Q05707 1796 aaKnown RBP19.98■□□□□ 0.79
TFE3-205ENST00000495940 RREB1Q92766 1687 aa19.97■□□□□ 0.79
TFE3-205ENST00000495940 TRPM3Q9HCF6 1732 aaPredicted RBP19.97■□□□□ 0.79
TFE3-205ENST00000495940 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
TFE3-205ENST00000495940 ADGRF5Q8IZF2 1346 aa19.97■□□□□ 0.79
TFE3-205ENST00000495940 NUP188Q5SRE5 1749 aa19.96■□□□□ 0.79
TFE3-205ENST00000495940 RRBP1Q9P2E9 1410 aaKnown RBP19.96■□□□□ 0.79
TFE3-205ENST00000495940 NRXN1Q9ULB1 1477 aa19.96■□□□□ 0.79
TFE3-205ENST00000495940 FAM83GA6ND36 823 aa19.95■□□□□ 0.78
TFE3-205ENST00000495940 EZH2Q15910 746 aaKnown RBP19.95■□□□□ 0.78
TFE3-205ENST00000495940 LMOD2Q6P5Q4 547 aa19.95■□□□□ 0.78
TFE3-205ENST00000495940 CRYBG1Q9Y4K1 1723 aa19.95■□□□□ 0.78
TFE3-205ENST00000495940 ALS2Q96Q42 1657 aa19.94■□□□□ 0.78
TFE3-205ENST00000495940 SBNO1A3KN83 1393 aa19.93■□□□□ 0.78
TFE3-205ENST00000495940 CAMTA1Q9Y6Y1 1673 aa19.92■□□□□ 0.78
TFE3-205ENST00000495940 TMEM132EQ6IEE7 984 aa19.92■□□□□ 0.78
TFE3-205ENST00000495940 PHF8Q9UPP1 1060 aa19.92■□□□□ 0.78
TFE3-205ENST00000495940 ARHGEF10O15013 1369 aa19.92■□□□□ 0.78
TFE3-205ENST00000495940 ABCC11Q96J66 1382 aa19.92■□□□□ 0.78
TFE3-205ENST00000495940 BTG4Q9NY30 223 aa19.91■□□□□ 0.78
TFE3-205ENST00000495940 YTHDC2Q9H6S0 1430 aaKnown RBP19.9■□□□□ 0.78
TFE3-205ENST00000495940 PSME1Q06323 249 aa19.89■□□□□ 0.77
TFE3-205ENST00000495940 PIK3C2GO75747 1445 aa19.88■□□□□ 0.77
TFE3-205ENST00000495940 SPATA31A5Q5VU36 1347 aa19.86■□□□□ 0.77
TFE3-205ENST00000495940 SPATA31A7Q8IWB4 1347 aa19.86■□□□□ 0.77
TFE3-205ENST00000495940 CAMKK2Q96RR4 588 aa19.86■□□□□ 0.77
TFE3-205ENST00000495940 TRIM37O94972 964 aa19.85■□□□□ 0.77
TFE3-205ENST00000495940 SPATA31E1Q6ZUB1 1445 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms