RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 ANKRD30BQ9BXX2 1392 aa15.8■□□□□ 0.12
RFTN1-211ENST00000495666 LRRC59Q96AG4 307 aaKnown RBP15.8■□□□□ 0.12
RFTN1-211ENST00000495666 PNPLA6Q8IY17 1366 aa15.79■□□□□ 0.12
RFTN1-211ENST00000495666 AFF2P51816 1311 aa15.79■□□□□ 0.12
RFTN1-211ENST00000495666 KNDC1Q76NI1 1749 aa15.79■□□□□ 0.12
RFTN1-211ENST00000495666 PIK3C2GO75747 1445 aa15.78■□□□□ 0.12
RFTN1-211ENST00000495666 ZNF772Q68DY9 489 aaPredicted RBP15.78■□□□□ 0.12
RFTN1-211ENST00000495666 KDM2AQ9Y2K7 1162 aa15.78■□□□□ 0.12
RFTN1-211ENST00000495666 CDC42BPGQ6DT37 1551 aa15.78■□□□□ 0.12
RFTN1-211ENST00000495666 CFAP70Q5T0N1 1121 aa15.77■□□□□ 0.12
RFTN1-211ENST00000495666 RGPD8O14715 1765 aaPredicted RBP15.77■□□□□ 0.11
RFTN1-211ENST00000495666 YTHDC2Q9H6S0 1430 aaKnown RBP15.76■□□□□ 0.11
RFTN1-211ENST00000495666 LRPPRCP42704 1394 aaKnown RBP15.75■□□□□ 0.11
RFTN1-211ENST00000495666 FOXO3O43524 673 aa15.75■□□□□ 0.11
RFTN1-211ENST00000495666 FMN2Q9NZ56 1722 aa15.74■□□□□ 0.11
RFTN1-211ENST00000495666 NGLY1Q96IV0 654 aa15.74■□□□□ 0.11
RFTN1-211ENST00000495666 LAMC1P11047 1609 aa15.73■□□□□ 0.11
RFTN1-211ENST00000495666 RXRBP28702 533 aa15.73■□□□□ 0.11
RFTN1-211ENST00000495666 PRAG1Q86YV5 1406 aa15.71■□□□□ 0.11
RFTN1-211ENST00000495666 DCAF11Q8TEB1 546 aa15.71■□□□□ 0.11
RFTN1-211ENST00000495666 PRAM1Q96QH2 718 aa15.71■□□□□ 0.11
RFTN1-211ENST00000495666 HIRIP3Q9BW71 556 aaPredicted RBP15.71■□□□□ 0.11
RFTN1-211ENST00000495666 POGKQ9P215 609 aa15.71■□□□□ 0.11
RFTN1-211ENST00000495666 MYOM2P54296 1465 aa15.71■□□□□ 0.1
RFTN1-211ENST00000495666 NPHP3Q7Z494 1330 aa15.7■□□□□ 0.1
RFTN1-211ENST00000495666 TECPR2O15040 1411 aa15.7■□□□□ 0.1
RFTN1-211ENST00000495666 LMOD2Q6P5Q4 547 aa15.7■□□□□ 0.1
RFTN1-211ENST00000495666 TRAK1Q9UPV9 953 aa15.7■□□□□ 0.1
RFTN1-211ENST00000495666 DHX57Q6P158 1386 aaKnown RBP15.7■□□□□ 0.1
RFTN1-211ENST00000495666 SOS2Q07890 1332 aaPredicted RBP15.69■□□□□ 0.1
RFTN1-211ENST00000495666 QTRT2Q9H974 415 aaKnown RBP15.69■□□□□ 0.1
RFTN1-211ENST00000495666 ABCC11Q96J66 1382 aa15.69■□□□□ 0.1
RFTN1-211ENST00000495666 PXDNQ92626 1479 aa15.69■□□□□ 0.1
RFTN1-211ENST00000495666 HAP1P54257 671 aaPredicted RBP15.68■□□□□ 0.1
RFTN1-211ENST00000495666 C14orf93Q9H972 538 aaKnown RBP15.68■□□□□ 0.1
RFTN1-211ENST00000495666 MINK1Q8N4C8 1332 aaPredicted RBP15.68■□□□□ 0.1
RFTN1-211ENST00000495666 KIF1AQ12756 1690 aa15.67■□□□□ 0.1
RFTN1-211ENST00000495666 USP21Q9UK80 565 aa15.67■□□□□ 0.1
RFTN1-211ENST00000495666 NRXN1Q9ULB1 1477 aa15.66■□□□□ 0.1
RFTN1-211ENST00000495666 MARF1Q9Y4F3 1742 aaKnown RBP15.66■□□□□ 0.1
RFTN1-211ENST00000495666 PMFBP1Q8TBY8 1022 aa15.66■□□□□ 0.1
RFTN1-211ENST00000495666 RGS12O14924 1447 aa15.66■□□□□ 0.1
RFTN1-211ENST00000495666 ACIN1Q9UKV3 1341 aaKnown RBP15.66■□□□□ 0.1
RFTN1-211ENST00000495666 COL22A1Q8NFW1 1626 aaPredicted RBP15.65■□□□□ 0.1
RFTN1-211ENST00000495666 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
RFTN1-211ENST00000495666 CABLES1Q8TDN4 633 aa15.63■□□□□ 0.09
RFTN1-211ENST00000495666 PHF8Q9UPP1 1060 aa15.63■□□□□ 0.09
RFTN1-211ENST00000495666 USP32Q8NFA0 1604 aa15.62■□□□□ 0.09
RFTN1-211ENST00000495666 RBM6P78332 1123 aaKnown RBP15.62■□□□□ 0.09
RFTN1-211ENST00000495666 ADGRB1O14514 1584 aa15.62■□□□□ 0.09
RFTN1-211ENST00000495666 UPF1Q92900 1129 aaKnown RBP eCLIP15.61■□□□□ 0.09
RFTN1-211ENST00000495666 ARHGEF28Q8N1W1 1705 aaKnown RBP15.6■□□□□ 0.09
RFTN1-211ENST00000495666 PSME1Q06323 249 aa15.6■□□□□ 0.09
RFTN1-211ENST00000495666 DLC1Q96QB1 1528 aa15.58■□□□□ 0.09
RFTN1-211ENST00000495666 ABCA3Q99758 1704 aa15.58■□□□□ 0.08
RFTN1-211ENST00000495666 TRPC5Q9UL62 973 aaPredicted RBP15.58■□□□□ 0.08
RFTN1-211ENST00000495666 SPATA31A3Q5VYP0 1347 aa15.58■□□□□ 0.08
RFTN1-211ENST00000495666 TNS3Q68CZ2 1445 aa15.58■□□□□ 0.08
RFTN1-211ENST00000495666 CCDC9Q9Y3X0 531 aaKnown RBP15.57■□□□□ 0.08
RFTN1-211ENST00000495666 CDK12Q9NYV4 1490 aaPredicted RBP15.57■□□□□ 0.08
RFTN1-211ENST00000495666 PAK3O75914 559 aaPredicted RBP15.56■□□□□ 0.08
RFTN1-211ENST00000495666 ADGRB2O60241 1585 aa15.56■□□□□ 0.08
RFTN1-211ENST00000495666 PLCH1Q4KWH8 1693 aa15.56■□□□□ 0.08
RFTN1-211ENST00000495666 ATRNO75882 1429 aa15.54■□□□□ 0.08
RFTN1-211ENST00000495666 PRR36Q9H6K5 1346 aa15.54■□□□□ 0.08
RFTN1-211ENST00000495666 A0A0G2JS52 829 aa15.54■□□□□ 0.08
RFTN1-211ENST00000495666 MYT1Q01538 1121 aa15.54■□□□□ 0.08
RFTN1-211ENST00000495666 NGDNQ8NEJ9 315 aaKnown RBP15.54■□□□□ 0.08
RFTN1-211ENST00000495666 SIRT1Q96EB6 747 aa15.54■□□□□ 0.08
RFTN1-211ENST00000495666 TULP4Q9NRJ4 1543 aa15.53■□□□□ 0.08
RFTN1-211ENST00000495666 BCL9LQ86UU0 1499 aa15.53■□□□□ 0.08
RFTN1-211ENST00000495666 NEUROD1Q13562 356 aa15.53■□□□□ 0.08
RFTN1-211ENST00000495666 FNBP4Q8N3X1 1017 aaPredicted RBP15.53■□□□□ 0.08
RFTN1-211ENST00000495666 ITSN1Q15811 1721 aa15.53■□□□□ 0.08
RFTN1-211ENST00000495666 WASLO00401 505 aaPredicted RBP15.52■□□□□ 0.08
RFTN1-211ENST00000495666 ANKARQ7Z5J8 1434 aa15.51■□□□□ 0.07
RFTN1-211ENST00000495666 TRPM3Q9HCF6 1732 aaPredicted RBP15.51■□□□□ 0.07
RFTN1-211ENST00000495666 GPRASP1Q5JY77 1395 aa15.51■□□□□ 0.07
RFTN1-211ENST00000495666 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.51■□□□□ 0.07
RFTN1-211ENST00000495666 ATAD2Q6PL18 1390 aa15.5■□□□□ 0.07
RFTN1-211ENST00000495666 BRWD3Q6RI45 1802 aa15.5■□□□□ 0.07
RFTN1-211ENST00000495666 NBPF1Q3BBV0 1214 aa15.5■□□□□ 0.07
RFTN1-211ENST00000495666 NUTM2GQ5VZR2 741 aa15.5■□□□□ 0.07
RFTN1-211ENST00000495666 SIN3AQ96ST3 1273 aa15.5■□□□□ 0.07
RFTN1-211ENST00000495666 GLI3P10071 1580 aa15.49■□□□□ 0.07
RFTN1-211ENST00000495666 RALGAPBQ86X10 1494 aa15.49■□□□□ 0.07
RFTN1-211ENST00000495666 HRCP23327 699 aa15.49■□□□□ 0.07
RFTN1-211ENST00000495666 UNC5CLQ8IV45 518 aa15.49■□□□□ 0.07
RFTN1-211ENST00000495666 GJD4Q96KN9 370 aaPredicted RBP15.49■□□□□ 0.07
RFTN1-211ENST00000495666 ARHGEF10O15013 1369 aa15.49■□□□□ 0.07
RFTN1-211ENST00000495666 EIF3AQ14152 1382 aaKnown RBP15.49■□□□□ 0.07
RFTN1-211ENST00000495666 ALS2Q96Q42 1657 aa15.48■□□□□ 0.07
RFTN1-211ENST00000495666 SBNO1A3KN83 1393 aa15.48■□□□□ 0.07
RFTN1-211ENST00000495666 SLIT2O94813 1529 aa15.48■□□□□ 0.07
RFTN1-211ENST00000495666 QRICH2Q9H0J4 1663 aa15.48■□□□□ 0.07
RFTN1-211ENST00000495666 ATP7BP35670 1465 aa15.47■□□□□ 0.07
RFTN1-211ENST00000495666 NUDT16Q96DE0 195 aaKnown RBP15.47■□□□□ 0.07
RFTN1-211ENST00000495666 CDK19Q9BWU1 502 aa15.47■□□□□ 0.07
RFTN1-211ENST00000495666 KIAA1210Q9ULL0 1709 aa15.47■□□□□ 0.07
RFTN1-211ENST00000495666 NWD2Q9ULI1 1742 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms