RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 TECPR2O15040 1411 aa32.92■■■□□ 2.86
HDDC3-203ENST00000494993 C8orf37Q96NL8 207 aa32.91■■■□□ 2.86
HDDC3-203ENST00000494993 PIK3C2GO75747 1445 aa32.89■■■□□ 2.86
HDDC3-203ENST00000494993 LRPPRCP42704 1394 aaKnown RBP32.89■■■□□ 2.86
HDDC3-203ENST00000494993 COL22A1Q8NFW1 1626 aaPredicted RBP32.88■■■□□ 2.85
HDDC3-203ENST00000494993 ACIN1Q9UKV3 1341 aaKnown RBP32.86■■■□□ 2.85
HDDC3-203ENST00000494993 STK26Q9P289 416 aa32.86■■■□□ 2.85
HDDC3-203ENST00000494993 ABCC11Q96J66 1382 aa32.84■■■□□ 2.85
HDDC3-203ENST00000494993 UPF1Q92900 1129 aaKnown RBP eCLIP32.84■■■□□ 2.85
HDDC3-203ENST00000494993 WAPLQ7Z5K2 1190 aa32.83■■■□□ 2.85
HDDC3-203ENST00000494993 ADAMTS2O95450 1211 aa32.82■■■□□ 2.84
HDDC3-203ENST00000494993 ESCO1Q5FWF5 840 aa32.82■■■□□ 2.84
HDDC3-203ENST00000494993 TMEM132EQ6IEE7 984 aa32.82■■■□□ 2.84
HDDC3-203ENST00000494993 FMN2Q9NZ56 1722 aa32.82■■■□□ 2.84
HDDC3-203ENST00000494993 QTRT2Q9H974 415 aaKnown RBP32.81■■■□□ 2.84
HDDC3-203ENST00000494993 PXDNQ92626 1479 aa32.8■■■□□ 2.84
HDDC3-203ENST00000494993 NPHP3Q7Z494 1330 aa32.8■■■□□ 2.84
HDDC3-203ENST00000494993 NGLY1Q96IV0 654 aa32.8■■■□□ 2.84
HDDC3-203ENST00000494993 YTHDC2Q9H6S0 1430 aaKnown RBP32.79■■■□□ 2.84
HDDC3-203ENST00000494993 PLEKHH1Q9ULM0 1364 aa32.79■■■□□ 2.84
HDDC3-203ENST00000494993 MARF1Q9Y4F3 1742 aaKnown RBP32.79■■■□□ 2.84
HDDC3-203ENST00000494993 RBM6P78332 1123 aaKnown RBP32.78■■■□□ 2.84
HDDC3-203ENST00000494993 RGS12O14924 1447 aa32.77■■■□□ 2.84
HDDC3-203ENST00000494993 NRXN1Q9ULB1 1477 aa32.76■■■□□ 2.84
HDDC3-203ENST00000494993 MYOM2P54296 1465 aa32.75■■■□□ 2.83
HDDC3-203ENST00000494993 KIF1AQ12756 1690 aa32.75■■■□□ 2.83
HDDC3-203ENST00000494993 RGPD8O14715 1765 aaPredicted RBP32.73■■■□□ 2.83
HDDC3-203ENST00000494993 NUTM2FA1L443 756 aa32.73■■■□□ 2.83
HDDC3-203ENST00000494993 FOXO3O43524 673 aa32.72■■■□□ 2.83
HDDC3-203ENST00000494993 RAB3GAP2Q9H2M9 1393 aa32.71■■■□□ 2.83
HDDC3-203ENST00000494993 C14orf93Q9H972 538 aaKnown RBP32.71■■■□□ 2.83
HDDC3-203ENST00000494993 XPCQ01831 940 aaPredicted RBP32.7■■■□□ 2.83
HDDC3-203ENST00000494993 SIRT1Q96EB6 747 aa32.69■■■□□ 2.82
HDDC3-203ENST00000494993 USP21Q9UK80 565 aa32.69■■■□□ 2.82
HDDC3-203ENST00000494993 FNBP4Q8N3X1 1017 aaPredicted RBP32.68■■■□□ 2.82
HDDC3-203ENST00000494993 CFAP70Q5T0N1 1121 aa32.66■■■□□ 2.82
HDDC3-203ENST00000494993 DHX57Q6P158 1386 aaKnown RBP32.66■■■□□ 2.82
HDDC3-203ENST00000494993 TRPC5Q9UL62 973 aaPredicted RBP32.65■■■□□ 2.82
HDDC3-203ENST00000494993 ATRNO75882 1429 aa32.63■■■□□ 2.81
HDDC3-203ENST00000494993 DLC1Q96QB1 1528 aa32.59■■■□□ 2.81
HDDC3-203ENST00000494993 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.59■■■□□ 2.81
HDDC3-203ENST00000494993 BCL9LQ86UU0 1499 aa32.58■■■□□ 2.81
HDDC3-203ENST00000494993 SPATA31A3Q5VYP0 1347 aa32.57■■■□□ 2.8
HDDC3-203ENST00000494993 ADGRB1O14514 1584 aa32.55■■■□□ 2.8
HDDC3-203ENST00000494993 PRAM1Q96QH2 718 aa32.55■■■□□ 2.8
HDDC3-203ENST00000494993 KRT28Q7Z3Y7 464 aa32.54■■■□□ 2.8
HDDC3-203ENST00000494993 ADGRB2O60241 1585 aa32.53■■■□□ 2.8
HDDC3-203ENST00000494993 USP32Q8NFA0 1604 aa32.53■■■□□ 2.8
HDDC3-203ENST00000494993 SAFB2Q14151 953 aaKnown RBP eCLIP32.53■■■□□ 2.8
HDDC3-203ENST00000494993 PHF8Q9UPP1 1060 aa32.53■■■□□ 2.8
HDDC3-203ENST00000494993 ATAD2Q6PL18 1390 aa32.52■■■□□ 2.8
HDDC3-203ENST00000494993 TNS3Q68CZ2 1445 aa32.51■■■□□ 2.79
HDDC3-203ENST00000494993 ABCA3Q99758 1704 aa32.49■■■□□ 2.79
HDDC3-203ENST00000494993 POGKQ9P215 609 aa32.49■■■□□ 2.79
HDDC3-203ENST00000494993 SLIT2O94813 1529 aa32.47■■■□□ 2.79
HDDC3-203ENST00000494993 PSME1Q06323 249 aa32.47■■■□□ 2.79
HDDC3-203ENST00000494993 ANKARQ7Z5J8 1434 aa32.47■■■□□ 2.79
HDDC3-203ENST00000494993 SBNO1A3KN83 1393 aa32.45■■■□□ 2.78
HDDC3-203ENST00000494993 GJD4Q96KN9 370 aaPredicted RBP32.44■■■□□ 2.78
HDDC3-203ENST00000494993 DCAF11Q8TEB1 546 aa32.43■■■□□ 2.78
HDDC3-203ENST00000494993 TRAK1Q9UPV9 953 aa32.43■■■□□ 2.78
HDDC3-203ENST00000494993 KDM2AQ9Y2K7 1162 aa32.43■■■□□ 2.78
HDDC3-203ENST00000494993 PLCH1Q4KWH8 1693 aa32.43■■■□□ 2.78
HDDC3-203ENST00000494993 GLI3P10071 1580 aa32.42■■■□□ 2.78
HDDC3-203ENST00000494993 UNC5CLQ8IV45 518 aa32.42■■■□□ 2.78
HDDC3-203ENST00000494993 NWD2Q9ULI1 1742 aa32.42■■■□□ 2.78
HDDC3-203ENST00000494993 HRCP23327 699 aa32.41■■■□□ 2.78
HDDC3-203ENST00000494993 TRPM3Q9HCF6 1732 aaPredicted RBP32.4■■■□□ 2.78
HDDC3-203ENST00000494993 EP400Q96L91 3159 aa32.4■■■□□ 2.78
HDDC3-203ENST00000494993 STAC3Q96MF2 364 aa32.39■■■□□ 2.78
HDDC3-203ENST00000494993 ARHGEF10O15013 1369 aa32.39■■■□□ 2.78
HDDC3-203ENST00000494993 RALGAPBQ86X10 1494 aa32.39■■■□□ 2.78
HDDC3-203ENST00000494993 ARHGEF28Q8N1W1 1705 aaKnown RBP32.38■■■□□ 2.77
HDDC3-203ENST00000494993 HAP1P54257 671 aaPredicted RBP32.38■■■□□ 2.77
HDDC3-203ENST00000494993 PMFBP1Q8TBY8 1022 aa32.38■■■□□ 2.77
HDDC3-203ENST00000494993 BRWD3Q6RI45 1802 aa32.37■■■□□ 2.77
HDDC3-203ENST00000494993 CABLES1Q8TDN4 633 aa32.37■■■□□ 2.77
HDDC3-203ENST00000494993 HIRIP3Q9BW71 556 aaPredicted RBP32.37■■■□□ 2.77
HDDC3-203ENST00000494993 TULP4Q9NRJ4 1543 aa32.36■■■□□ 2.77
HDDC3-203ENST00000494993 MINK1Q8N4C8 1332 aaPredicted RBP32.36■■■□□ 2.77
HDDC3-203ENST00000494993 EIF3AQ14152 1382 aaKnown RBP32.35■■■□□ 2.77
HDDC3-203ENST00000494993 ALS2Q96Q42 1657 aa32.35■■■□□ 2.77
HDDC3-203ENST00000494993 LMOD2Q6P5Q4 547 aa32.35■■■□□ 2.77
HDDC3-203ENST00000494993 PLEKHG5O94827 1062 aa32.32■■■□□ 2.76
HDDC3-203ENST00000494993 PRR36Q9H6K5 1346 aa32.31■■■□□ 2.76
HDDC3-203ENST00000494993 ITSN1Q15811 1721 aa32.31■■■□□ 2.76
HDDC3-203ENST00000494993 WASLO00401 505 aaPredicted RBP32.29■■■□□ 2.76
HDDC3-203ENST00000494993 GPRASP1Q5JY77 1395 aa32.28■■■□□ 2.76
HDDC3-203ENST00000494993 VPS72Q15906 364 aa32.27■■■□□ 2.76
HDDC3-203ENST00000494993 NRAPQ86VF7 1730 aa32.26■■■□□ 2.76
HDDC3-203ENST00000494993 CCDC125Q86Z20 511 aa32.26■■■□□ 2.75
HDDC3-203ENST00000494993 KIAA1210Q9ULL0 1709 aa32.26■■■□□ 2.75
HDDC3-203ENST00000494993 CRYBG1Q9Y4K1 1723 aa32.26■■■□□ 2.75
HDDC3-203ENST00000494993 COL14A1Q05707 1796 aaKnown RBP32.22■■■□□ 2.75
HDDC3-203ENST00000494993 FAM83GA6ND36 823 aa32.21■■■□□ 2.75
HDDC3-203ENST00000494993 ATP7BP35670 1465 aa32.21■■■□□ 2.75
HDDC3-203ENST00000494993 SEPT12Q8IYM1 358 aa32.19■■■□□ 2.74
HDDC3-203ENST00000494993 NGDNQ8NEJ9 315 aaKnown RBP32.19■■■□□ 2.74
HDDC3-203ENST00000494993 CCDC9Q9Y3X0 531 aaKnown RBP32.19■■■□□ 2.74
HDDC3-203ENST00000494993 BLMP54132 1417 aaPredicted RBP32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms