RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-208ENST00000494977 ERICH4A6NGS2 130 aa7.72□□□□□ -1.17
FGD4-208ENST00000494977 SSR1P43307 286 aaKnown RBP7.72□□□□□ -1.17
FGD4-208ENST00000494977 RAD51AP2Q09MP3 1159 aa7.72□□□□□ -1.17
FGD4-208ENST00000494977 MLECQ14165 292 aa7.72□□□□□ -1.17
FGD4-208ENST00000494977 NOLC1Q14978 699 aaKnown RBP eCLIP7.72□□□□□ -1.17
FGD4-208ENST00000494977 NBPF11Q86T75 865 aa7.72□□□□□ -1.17
FGD4-208ENST00000494977 SH3BP1Q9Y3L3 701 aa7.72□□□□□ -1.17
FGD4-208ENST00000494977 KIF7Q2M1P5 1343 aa7.72□□□□□ -1.17
FGD4-208ENST00000494977 TDO2P48775 406 aa7.72□□□□□ -1.17
FGD4-208ENST00000494977 RAB3GAP1Q15042 981 aa7.72□□□□□ -1.17
FGD4-208ENST00000494977 JARID2Q92833 1246 aaPredicted RBP7.72□□□□□ -1.17
FGD4-208ENST00000494977 ZNF692Q9BU19 519 aaPredicted RBP7.72□□□□□ -1.17
FGD4-208ENST00000494977 CTNNA3Q9UI47 895 aa7.72□□□□□ -1.17
FGD4-208ENST00000494977 RAD50Q92878 1312 aa7.71□□□□□ -1.17
FGD4-208ENST00000494977 DHX29Q7Z478 1369 aaKnown RBP7.71□□□□□ -1.17
FGD4-208ENST00000494977 UACAQ9BZF9 1416 aa7.71□□□□□ -1.17
FGD4-208ENST00000494977 RAPGEF2Q9Y4G8 1499 aa7.71□□□□□ -1.17
FGD4-208ENST00000494977 GPATCH11Q8N954 259 aa7.71□□□□□ -1.18
FGD4-208ENST00000494977 PSMD1Q99460 953 aa7.71□□□□□ -1.18
FGD4-208ENST00000494977 NCOA3Q9Y6Q9 1424 aa7.71□□□□□ -1.18
FGD4-208ENST00000494977 WIZO95785 1651 aa7.71□□□□□ -1.18
FGD4-208ENST00000494977 CTTNBP2Q8WZ74 1663 aa7.71□□□□□ -1.18
FGD4-208ENST00000494977 TTC36A6NLP5 189 aa7.7□□□□□ -1.18
FGD4-208ENST00000494977 CTIFO43310 598 aaKnown RBP7.7□□□□□ -1.18
FGD4-208ENST00000494977 TRHP20396 242 aaPredicted RBP7.7□□□□□ -1.18
FGD4-208ENST00000494977 FKBP5Q13451 457 aaPredicted RBP7.7□□□□□ -1.18
FGD4-208ENST00000494977 NBPF9Q3BBW0 867 aa7.7□□□□□ -1.18
FGD4-208ENST00000494977 SPINK5Q9NQ38 1064 aaPredicted RBP7.7□□□□□ -1.18
FGD4-208ENST00000494977 SENP3-EIF4A1A0A087X0R7 540 aa7.7□□□□□ -1.18
FGD4-208ENST00000494977 IRF6O14896 467 aa7.7□□□□□ -1.18
FGD4-208ENST00000494977 ZNF853P0CG23 659 aa7.7□□□□□ -1.18
FGD4-208ENST00000494977 CASQ1P31415 396 aa7.7□□□□□ -1.18
FGD4-208ENST00000494977 DDIT3P35638 169 aa7.7□□□□□ -1.18
FGD4-208ENST00000494977 HNRNPH2P55795 449 aaKnown RBP7.7□□□□□ -1.18
FGD4-208ENST00000494977 SEMA3FQ13275 785 aa7.7□□□□□ -1.18
FGD4-208ENST00000494977 TPRNQ4KMQ1 711 aa7.7□□□□□ -1.18
FGD4-208ENST00000494977 TRERF1Q96PN7 1200 aa7.7□□□□□ -1.18
FGD4-208ENST00000494977 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.7□□□□□ -1.18
FGD4-208ENST00000494977 EIF3AQ14152 1382 aaKnown RBP7.7□□□□□ -1.18
FGD4-208ENST00000494977 CCDC91Q7Z6B0 441 aa7.69□□□□□ -1.18
FGD4-208ENST00000494977 SMC5Q8IY18 1101 aa7.69□□□□□ -1.18
FGD4-208ENST00000494977 RNF217Q8TC41 542 aa7.69□□□□□ -1.18
FGD4-208ENST00000494977 RBSNQ9H1K0 784 aa7.69□□□□□ -1.18
FGD4-208ENST00000494977 MED4Q9NPJ6 270 aa7.69□□□□□ -1.18
FGD4-208ENST00000494977 NPC1L1Q9UHC9 1359 aa7.69□□□□□ -1.18
FGD4-208ENST00000494977 PLEKHH2Q8IVE3 1493 aa7.69□□□□□ -1.18
FGD4-208ENST00000494977 REC8O95072 547 aa7.69□□□□□ -1.18
FGD4-208ENST00000494977 FAM50AQ14320 339 aaKnown RBP7.69□□□□□ -1.18
FGD4-208ENST00000494977 DEF6Q9H4E7 631 aa7.69□□□□□ -1.18
FGD4-208ENST00000494977 MROH2BQ7Z745 1585 aa7.68□□□□□ -1.18
FGD4-208ENST00000494977 FAM177BA6PVY3 158 aa7.68□□□□□ -1.18
FGD4-208ENST00000494977 CYP2C19P33261 490 aa7.68□□□□□ -1.18
FGD4-208ENST00000494977 ZSCAN23Q3MJ62 389 aa7.68□□□□□ -1.18
FGD4-208ENST00000494977 CLEC17AQ6ZS10 378 aa7.68□□□□□ -1.18
FGD4-208ENST00000494977 SPTLC3Q9NUV7 552 aa7.68□□□□□ -1.18
FGD4-208ENST00000494977 HOXD11P31277 338 aaPredicted RBP7.68□□□□□ -1.18
FGD4-208ENST00000494977 C22orf23Q9BZE7 217 aa7.68□□□□□ -1.18
FGD4-208ENST00000494977 BSDC1Q9NW68 430 aaPredicted RBP7.68□□□□□ -1.18
FGD4-208ENST00000494977 ARHGAP31Q2M1Z3 1444 aa7.67□□□□□ -1.18
FGD4-208ENST00000494977 INSRP06213 1382 aa7.67□□□□□ -1.18
FGD4-208ENST00000494977 MYBBP1AQ9BQG0 1328 aaKnown RBP7.67□□□□□ -1.18
FGD4-208ENST00000494977 RIOK3O14730 519 aaKnown RBP7.67□□□□□ -1.18
FGD4-208ENST00000494977 NOM1Q5C9Z4 860 aaKnown RBP7.67□□□□□ -1.18
FGD4-208ENST00000494977 MUM1L1Q5H9M0 696 aa7.67□□□□□ -1.18
FGD4-208ENST00000494977 NBPF10Q6P3W6 841 aaKnown RBP7.67□□□□□ -1.18
FGD4-208ENST00000494977 KIF18AQ8NI77 898 aa7.67□□□□□ -1.18
FGD4-208ENST00000494977 TERF2IPQ9NYB0 399 aa7.67□□□□□ -1.18
FGD4-208ENST00000494977 CWC15Q9P013 229 aaKnown RBP7.67□□□□□ -1.18
FGD4-208ENST00000494977 ZKSCAN8Q15776 578 aaPredicted RBP7.67□□□□□ -1.18
FGD4-208ENST00000494977 SNX21Q969T3 373 aa7.67□□□□□ -1.18
FGD4-208ENST00000494977 CDCA7LQ96GN5 454 aa7.67□□□□□ -1.18
FGD4-208ENST00000494977 TMX1Q9H3N1 280 aa7.67□□□□□ -1.18
FGD4-208ENST00000494977 CXorf56Q9H5V9 222 aa7.67□□□□□ -1.18
FGD4-208ENST00000494977 JRKLQ9Y4A0 524 aa7.67□□□□□ -1.18
FGD4-208ENST00000494977 CCDC18Q5T9S5 1454 aa7.67□□□□□ -1.18
FGD4-208ENST00000494977 TXLNBQ8N3L3 684 aa7.66□□□□□ -1.18
FGD4-208ENST00000494977 SUFUQ9UMX1 484 aa7.66□□□□□ -1.18
FGD4-208ENST00000494977 KNSTRNQ9Y448 316 aa7.66□□□□□ -1.18
FGD4-208ENST00000494977 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.66□□□□□ -1.18
FGD4-208ENST00000494977 KIF15Q9NS87 1388 aa7.66□□□□□ -1.18
FGD4-208ENST00000494977 A0A1B0GUL7 405 aa7.66□□□□□ -1.18
FGD4-208ENST00000494977 NCBP1Q09161 790 aaKnown RBP7.66□□□□□ -1.18
FGD4-208ENST00000494977 TRDNQ13061 729 aa7.66□□□□□ -1.18
FGD4-208ENST00000494977 TEX35Q5T0J7 233 aa7.66□□□□□ -1.18
FGD4-208ENST00000494977 LRCH2Q5VUJ6 765 aa7.66□□□□□ -1.18
FGD4-208ENST00000494977 NBPF6Q5VWK0 638 aa7.66□□□□□ -1.18
FGD4-208ENST00000494977 CAVIN1Q6NZI2 390 aaKnown RBP7.66□□□□□ -1.18
FGD4-208ENST00000494977 LRSAM1Q6UWE0 723 aa7.66□□□□□ -1.18
FGD4-208ENST00000494977 NBPF5PQ86XG9 351 aaPredicted RBP7.66□□□□□ -1.18
FGD4-208ENST00000494977 NBPF4Q96M43 638 aa7.66□□□□□ -1.18
FGD4-208ENST00000494977 NOL10Q9BSC4 688 aaKnown RBP7.66□□□□□ -1.18
FGD4-208ENST00000494977 TOMM22Q9NS69 142 aa7.66□□□□□ -1.18
FGD4-208ENST00000494977 DNAJC5BQ9UF47 199 aa7.66□□□□□ -1.18
FGD4-208ENST00000494977 ZMYM4Q5VZL5 1548 aa7.65□□□□□ -1.18
FGD4-208ENST00000494977 ZBTB7CA1YPR0 619 aa7.65□□□□□ -1.18
FGD4-208ENST00000494977 KIF3CO14782 793 aa7.65□□□□□ -1.18
FGD4-208ENST00000494977 PPP1R12AO14974 1030 aaPredicted RBP7.65□□□□□ -1.18
FGD4-208ENST00000494977 PRIM1P49642 420 aaKnown RBP7.65□□□□□ -1.18
FGD4-208ENST00000494977 SRPK2P78362 688 aaKnown RBP7.65□□□□□ -1.18
FGD4-208ENST00000494977 SGSM3Q96HU1 749 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms