RNA–Protein interactions for RNA: ENST00000494877.5

GABBR1-220, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-220ENST00000494877 USP32Q8NFA0 1604 aa22.8■■□□□ 1.24
GABBR1-220ENST00000494877 YTHDC2Q9H6S0 1430 aaKnown RBP22.79■■□□□ 1.24
GABBR1-220ENST00000494877 ALKQ9UM73 1620 aa22.79■■□□□ 1.24
GABBR1-220ENST00000494877 A2ML1A8K2U0 1454 aa22.78■■□□□ 1.24
GABBR1-220ENST00000494877 PTPRMP28827 1452 aa22.78■■□□□ 1.24
GABBR1-220ENST00000494877 RRP1P56182 461 aaKnown RBP22.78■■□□□ 1.24
GABBR1-220ENST00000494877 ANKRD36BQ8N2N9 1353 aa22.77■■□□□ 1.24
GABBR1-220ENST00000494877 MORC1Q86VD1 984 aa22.77■■□□□ 1.24
GABBR1-220ENST00000494877 POLR3AO14802 1390 aaPredicted RBP22.77■■□□□ 1.24
GABBR1-220ENST00000494877 SAFB2Q14151 953 aaKnown RBP eCLIP22.77■■□□□ 1.24
GABBR1-220ENST00000494877 CGNL1Q0VF96 1302 aa22.77■■□□□ 1.23
GABBR1-220ENST00000494877 NINLQ9Y2I6 1382 aa22.76■■□□□ 1.23
GABBR1-220ENST00000494877 SENP3Q9H4L4 574 aaPredicted RBP22.76■■□□□ 1.23
GABBR1-220ENST00000494877 CABP2Q9NPB3 220 aa22.76■■□□□ 1.23
GABBR1-220ENST00000494877 ZMYM3Q14202 1370 aa22.74■■□□□ 1.23
GABBR1-220ENST00000494877 PLEKHH1Q9ULM0 1364 aa22.74■■□□□ 1.23
GABBR1-220ENST00000494877 PRAM1Q96QH2 718 aa22.74■■□□□ 1.23
GABBR1-220ENST00000494877 POGKQ9P215 609 aa22.74■■□□□ 1.23
GABBR1-220ENST00000494877 ZNF521Q96K83 1311 aa22.73■■□□□ 1.23
GABBR1-220ENST00000494877 RIMS2Q9UQ26 1411 aa22.73■■□□□ 1.23
GABBR1-220ENST00000494877 NSD2O96028 1365 aa22.72■■□□□ 1.23
GABBR1-220ENST00000494877 SRPK2P78362 688 aaKnown RBP22.71■■□□□ 1.23
GABBR1-220ENST00000494877 ATAD2Q6PL18 1390 aa22.7■■□□□ 1.23
GABBR1-220ENST00000494877 CCDC136Q96JN2 1154 aa22.69■■□□□ 1.22
GABBR1-220ENST00000494877 RBM19Q9Y4C8 960 aaKnown RBP22.69■■□□□ 1.22
GABBR1-220ENST00000494877 MINK1Q8N4C8 1332 aaPredicted RBP22.69■■□□□ 1.22
GABBR1-220ENST00000494877 CCDC146Q8IYE0 955 aa22.69■■□□□ 1.22
GABBR1-220ENST00000494877 NGEFQ8N5V2 710 aa22.69■■□□□ 1.22
GABBR1-220ENST00000494877 GOLGA2Q08379 1002 aa22.68■■□□□ 1.22
GABBR1-220ENST00000494877 TNNT2P45379 298 aaPredicted RBP22.67■■□□□ 1.22
GABBR1-220ENST00000494877 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.67■■□□□ 1.22
GABBR1-220ENST00000494877 DLC1Q96QB1 1528 aa22.66■■□□□ 1.22
GABBR1-220ENST00000494877 APAF1O14727 1248 aa22.66■■□□□ 1.22
GABBR1-220ENST00000494877 DUSP27Q5VZP5 1158 aa22.66■■□□□ 1.22
GABBR1-220ENST00000494877 A0A1W2PP64 1363 aa22.65■■□□□ 1.22
GABBR1-220ENST00000494877 SETD1AO15047 1707 aaKnown RBP22.65■■□□□ 1.22
GABBR1-220ENST00000494877 ABCC11Q96J66 1382 aa22.64■■□□□ 1.22
GABBR1-220ENST00000494877 PLPPR3Q6T4P5 718 aa22.64■■□□□ 1.22
GABBR1-220ENST00000494877 TERF2IPQ9NYB0 399 aa22.64■■□□□ 1.21
GABBR1-220ENST00000494877 CEBPAP49715 358 aaPredicted RBP22.63■■□□□ 1.21
GABBR1-220ENST00000494877 SHPRHQ149N8 1683 aa22.63■■□□□ 1.21
GABBR1-220ENST00000494877 MTHFSP49914 203 aa22.62■■□□□ 1.21
GABBR1-220ENST00000494877 SLFN5Q08AF3 891 aa22.62■■□□□ 1.21
GABBR1-220ENST00000494877 HDGFP51858 240 aaKnown RBP22.62■■□□□ 1.21
GABBR1-220ENST00000494877 CFAP53Q96M91 514 aa22.62■■□□□ 1.21
GABBR1-220ENST00000494877 CDK19Q9BWU1 502 aa22.62■■□□□ 1.21
GABBR1-220ENST00000494877 TNRQ92752 1358 aa22.62■■□□□ 1.21
GABBR1-220ENST00000494877 TRMT2AQ8IZ69 625 aaKnown RBP22.61■■□□□ 1.21
GABBR1-220ENST00000494877 EXOC6Q8TAG9 804 aa22.61■■□□□ 1.21
GABBR1-220ENST00000494877 NRXN3Q9Y4C0 1643 aa22.59■■□□□ 1.21
GABBR1-220ENST00000494877 CD163L1Q9NR16 1453 aa22.59■■□□□ 1.21
GABBR1-220ENST00000494877 ANP32EQ9BTT0 268 aa22.58■■□□□ 1.21
GABBR1-220ENST00000494877 HDGFL2Q7Z4V5 671 aaPredicted RBP22.57■■□□□ 1.2
GABBR1-220ENST00000494877 WAPLQ7Z5K2 1190 aa22.57■■□□□ 1.2
GABBR1-220ENST00000494877 E9PSI1 815 aa22.56■■□□□ 1.2
GABBR1-220ENST00000494877 RUNDC1Q96C34 613 aa22.56■■□□□ 1.2
GABBR1-220ENST00000494877 MED14O60244 1454 aa22.56■■□□□ 1.2
GABBR1-220ENST00000494877 PLIN1O60240 522 aa22.55■■□□□ 1.2
GABBR1-220ENST00000494877 METP08581 1390 aa22.54■■□□□ 1.2
GABBR1-220ENST00000494877 FYB1O15117 783 aa22.54■■□□□ 1.2
GABBR1-220ENST00000494877 CABP1Q9NZU7 370 aa22.54■■□□□ 1.2
GABBR1-220ENST00000494877 TMEM2Q9UHN6 1383 aa22.53■■□□□ 1.2
GABBR1-220ENST00000494877 ANKRD26Q9UPS8 1709 aa22.53■■□□□ 1.2
GABBR1-220ENST00000494877 UBR1Q8IWV7 1749 aa22.53■■□□□ 1.2
GABBR1-220ENST00000494877 GGNBP2Q9H3C7 697 aa22.53■■□□□ 1.2
GABBR1-220ENST00000494877 SPINK5Q9NQ38 1064 aaPredicted RBP22.53■■□□□ 1.2
GABBR1-220ENST00000494877 NKTRP30414 1462 aaKnown RBP22.53■■□□□ 1.2
GABBR1-220ENST00000494877 NLRP1Q9C000 1473 aa22.52■■□□□ 1.2
GABBR1-220ENST00000494877 WWC1Q8IX03 1113 aa22.52■■□□□ 1.19
GABBR1-220ENST00000494877 SIRT1Q96EB6 747 aa22.52■■□□□ 1.19
GABBR1-220ENST00000494877 ATP7BP35670 1465 aa22.5■■□□□ 1.19
GABBR1-220ENST00000494877 TECPR2O15040 1411 aa22.49■■□□□ 1.19
GABBR1-220ENST00000494877 FAM135BQ49AJ0 1406 aa22.49■■□□□ 1.19
GABBR1-220ENST00000494877 IQSEC2Q5JU85 1478 aa22.49■■□□□ 1.19
GABBR1-220ENST00000494877 TCP11L2Q8N4U5 519 aa22.49■■□□□ 1.19
GABBR1-220ENST00000494877 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.49■■□□□ 1.19
GABBR1-220ENST00000494877 KNDC1Q76NI1 1749 aa22.49■■□□□ 1.19
GABBR1-220ENST00000494877 CRBNQ96SW2 442 aa22.48■■□□□ 1.19
GABBR1-220ENST00000494877 WASLO00401 505 aaPredicted RBP22.47■■□□□ 1.19
GABBR1-220ENST00000494877 NCBP3Q53F19 620 aaKnown RBP22.47■■□□□ 1.19
GABBR1-220ENST00000494877 DMRT2Q9Y5R5 561 aa22.47■■□□□ 1.19
GABBR1-220ENST00000494877 TXNDC2Q86VQ3 553 aa22.47■■□□□ 1.19
GABBR1-220ENST00000494877 PHF23Q9BUL5 403 aaPredicted RBP22.47■■□□□ 1.19
GABBR1-220ENST00000494877 FER1L4A9Z1Z3 1794 aa22.47■■□□□ 1.19
GABBR1-220ENST00000494877 U2AF1L5P0DN76 240 aaPredicted RBP22.46■■□□□ 1.19
GABBR1-220ENST00000494877 U2AF1Q01081 240 aaKnown RBP eCLIP22.46■■□□□ 1.19
GABBR1-220ENST00000494877 KIF20BQ96Q89 1820 aa22.46■■□□□ 1.19
GABBR1-220ENST00000494877 CCDC27Q2M243 656 aa22.45■■□□□ 1.18
GABBR1-220ENST00000494877 CPS1P31327 1500 aa22.44■■□□□ 1.18
GABBR1-220ENST00000494877 C20orf194Q5TEA3 1177 aa22.43■■□□□ 1.18
GABBR1-220ENST00000494877 WDR63Q8IWG1 891 aa22.43■■□□□ 1.18
GABBR1-220ENST00000494877 COL3A1P02461 1466 aaPredicted RBP22.43■■□□□ 1.18
GABBR1-220ENST00000494877 C3P01024 1663 aa22.43■■□□□ 1.18
GABBR1-220ENST00000494877 NEUROD2Q15784 382 aa22.43■■□□□ 1.18
GABBR1-220ENST00000494877 RRP7AQ9Y3A4 280 aaKnown RBP22.42■■□□□ 1.18
GABBR1-220ENST00000494877 FANCIQ9NVI1 1328 aa22.41■■□□□ 1.18
GABBR1-220ENST00000494877 ADAMTS13Q76LX8 1427 aa22.41■■□□□ 1.18
GABBR1-220ENST00000494877 PLEKHG1Q9ULL1 1385 aa22.41■■□□□ 1.18
GABBR1-220ENST00000494877 CPSF1Q10570 1443 aaKnown RBP22.41■■□□□ 1.18
GABBR1-220ENST00000494877 PPIP5K1Q6PFW1 1433 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms