RNA–Protein interactions for RNA: ENST00000494645.1

SEC23B-208, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 2

Gene SEC23B, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-208ENST00000494645 AFF2P51816 1311 aa10.21□□□□□ -0.78
SEC23B-208ENST00000494645 MST1RQ04912 1400 aa10.2□□□□□ -0.78
SEC23B-208ENST00000494645 ASXL1Q8IXJ9 1541 aa10.2□□□□□ -0.78
SEC23B-208ENST00000494645 NRXN3Q9Y4C0 1643 aa10.19□□□□□ -0.78
SEC23B-208ENST00000494645 ADAMTS2O95450 1211 aa10.19□□□□□ -0.78
SEC23B-208ENST00000494645 FXR2P51116 673 aaKnown RBP eCLIP10.19□□□□□ -0.78
SEC23B-208ENST00000494645 LRRC59Q96AG4 307 aaKnown RBP10.19□□□□□ -0.78
SEC23B-208ENST00000494645 SETBP1Q9Y6X0 1596 aa10.18□□□□□ -0.78
SEC23B-208ENST00000494645 DCCP43146 1447 aa10.18□□□□□ -0.78
SEC23B-208ENST00000494645 XRN1Q8IZH2 1706 aaKnown RBP10.18□□□□□ -0.78
SEC23B-208ENST00000494645 SHPRHQ149N8 1683 aa10.18□□□□□ -0.78
SEC23B-208ENST00000494645 SETD5Q9C0A6 1442 aa10.17□□□□□ -0.78
SEC23B-208ENST00000494645 ADGRL3Q9HAR2 1447 aa10.17□□□□□ -0.78
SEC23B-208ENST00000494645 SPHKAPQ2M3C7 1700 aa10.17□□□□□ -0.78
SEC23B-208ENST00000494645 QTRT2Q9H974 415 aaKnown RBP10.17□□□□□ -0.78
SEC23B-208ENST00000494645 CLTCL1P53675 1640 aa10.17□□□□□ -0.78
SEC23B-208ENST00000494645 PNPLA6Q8IY17 1366 aa10.16□□□□□ -0.78
SEC23B-208ENST00000494645 NGLY1Q96IV0 654 aa10.16□□□□□ -0.78
SEC23B-208ENST00000494645 ORAI2Q96SN7 254 aa10.16□□□□□ -0.78
SEC23B-208ENST00000494645 ROBO2Q9HCK4 1378 aa10.15□□□□□ -0.78
SEC23B-208ENST00000494645 VGFO15240 615 aaPredicted RBP10.15□□□□□ -0.78
SEC23B-208ENST00000494645 NEXMIFQ5QGS0 1516 aa10.15□□□□□ -0.78
SEC23B-208ENST00000494645 C1orf167Q5SNV9 1468 aa10.15□□□□□ -0.78
SEC23B-208ENST00000494645 NAIPQ13075 1403 aa10.15□□□□□ -0.79
SEC23B-208ENST00000494645 RBM6P78332 1123 aaKnown RBP10.13□□□□□ -0.79
SEC23B-208ENST00000494645 NHSL1Q5SYE7 1610 aa10.13□□□□□ -0.79
SEC23B-208ENST00000494645 NALCNQ8IZF0 1738 aa10.13□□□□□ -0.79
SEC23B-208ENST00000494645 NUTM2FA1L443 756 aa10.12□□□□□ -0.79
SEC23B-208ENST00000494645 HAX1O00165 279 aa10.12□□□□□ -0.79
SEC23B-208ENST00000494645 XPCQ01831 940 aaPredicted RBP10.12□□□□□ -0.79
SEC23B-208ENST00000494645 STK26Q9P289 416 aa10.12□□□□□ -0.79
SEC23B-208ENST00000494645 RGS12O14924 1447 aa10.12□□□□□ -0.79
SEC23B-208ENST00000494645 RRBP1Q9P2E9 1410 aaKnown RBP10.12□□□□□ -0.79
SEC23B-208ENST00000494645 RGL3Q3MIN7 710 aa10.11□□□□□ -0.79
SEC23B-208ENST00000494645 ESCO1Q5FWF5 840 aa10.11□□□□□ -0.79
SEC23B-208ENST00000494645 USP21Q9UK80 565 aa10.11□□□□□ -0.79
SEC23B-208ENST00000494645 CDK12Q9NYV4 1490 aaPredicted RBP10.1□□□□□ -0.79
SEC23B-208ENST00000494645 SOS2Q07890 1332 aaPredicted RBP10.1□□□□□ -0.79
SEC23B-208ENST00000494645 RPGRIP1LQ68CZ1 1315 aa10.1□□□□□ -0.79
SEC23B-208ENST00000494645 PTCH1Q13635 1447 aa10.1□□□□□ -0.79
SEC23B-208ENST00000494645 KIF1BO60333 1816 aa10.1□□□□□ -0.79
SEC23B-208ENST00000494645 WAPLQ7Z5K2 1190 aa10.09□□□□□ -0.79
SEC23B-208ENST00000494645 ADGRF5Q8IZF2 1346 aa10.08□□□□□ -0.8
SEC23B-208ENST00000494645 SPDYE2BA6NHP3 402 aa10.08□□□□□ -0.8
SEC23B-208ENST00000494645 FOXO3O43524 673 aa10.08□□□□□ -0.8
SEC23B-208ENST00000494645 PLEKHG5O94827 1062 aa10.08□□□□□ -0.8
SEC23B-208ENST00000494645 SPDYE6P0CI01 402 aa10.08□□□□□ -0.8
SEC23B-208ENST00000494645 SPDYE2Q495Y8 402 aa10.08□□□□□ -0.8
SEC23B-208ENST00000494645 TMEM132EQ6IEE7 984 aa10.08□□□□□ -0.8
SEC23B-208ENST00000494645 TRPC5Q9UL62 973 aaPredicted RBP10.08□□□□□ -0.8
SEC23B-208ENST00000494645 HFM1A2PYH4 1435 aa10.07□□□□□ -0.8
SEC23B-208ENST00000494645 NPHP3Q7Z494 1330 aa10.07□□□□□ -0.8
SEC23B-208ENST00000494645 FNBP4Q8N3X1 1017 aaPredicted RBP10.06□□□□□ -0.8
SEC23B-208ENST00000494645 ATAD2Q6PL18 1390 aa10.05□□□□□ -0.8
SEC23B-208ENST00000494645 PLEKHH1Q9ULM0 1364 aa10.05□□□□□ -0.8
SEC23B-208ENST00000494645 EVX2Q03828 476 aa10.04□□□□□ -0.8
SEC23B-208ENST00000494645 MPHOSPH9Q99550 1183 aa10.04□□□□□ -0.8
SEC23B-208ENST00000494645 CCDC144AA2RUR9 1427 aa10.04□□□□□ -0.8
SEC23B-208ENST00000494645 ATRNO75882 1429 aa10.04□□□□□ -0.8
SEC23B-208ENST00000494645 MKRN4PQ13434 485 aaPredicted RBP10.03□□□□□ -0.8
SEC23B-208ENST00000494645 PRAG1Q86YV5 1406 aa10.03□□□□□ -0.8
SEC23B-208ENST00000494645 PPLO60437 1756 aa10.03□□□□□ -0.8
SEC23B-208ENST00000494645 LAMC1P11047 1609 aa10.03□□□□□ -0.8
SEC23B-208ENST00000494645 MYOM2P54296 1465 aa10.03□□□□□ -0.8
SEC23B-208ENST00000494645 PXDNQ92626 1479 aa10.03□□□□□ -0.8
SEC23B-208ENST00000494645 LRPPRCP42704 1394 aaKnown RBP10.02□□□□□ -0.8
SEC23B-208ENST00000494645 SAFB2Q14151 953 aaKnown RBP eCLIP10.02□□□□□ -0.81
SEC23B-208ENST00000494645 KRT28Q7Z3Y7 464 aa10.02□□□□□ -0.81
SEC23B-208ENST00000494645 BCL9LQ86UU0 1499 aa10.02□□□□□ -0.81
SEC23B-208ENST00000494645 SPATA31E1Q6ZUB1 1445 aa10.01□□□□□ -0.81
SEC23B-208ENST00000494645 HAP1P54257 671 aaPredicted RBP10.01□□□□□ -0.81
SEC23B-208ENST00000494645 LMOD2Q6P5Q4 547 aa10.01□□□□□ -0.81
SEC23B-208ENST00000494645 GJD4Q96KN9 370 aaPredicted RBP10.01□□□□□ -0.81
SEC23B-208ENST00000494645 CDC42BPGQ6DT37 1551 aa10.01□□□□□ -0.81
SEC23B-208ENST00000494645 ABCC11Q96J66 1382 aa10.01□□□□□ -0.81
SEC23B-208ENST00000494645 ANKRD30BQ9BXX2 1392 aa10.01□□□□□ -0.81
SEC23B-208ENST00000494645 CABLES1Q8TDN4 633 aa10□□□□□ -0.81
SEC23B-208ENST00000494645 ZRANB1Q9UGI0 708 aa10□□□□□ -0.81
SEC23B-208ENST00000494645 SPATA31A3Q5VYP0 1347 aa10□□□□□ -0.81
SEC23B-208ENST00000494645 COL22A1Q8NFW1 1626 aaPredicted RBP10□□□□□ -0.81
SEC23B-208ENST00000494645 YTHDC2Q9H6S0 1430 aaKnown RBP9.99□□□□□ -0.81
SEC23B-208ENST00000494645 CFAP70Q5T0N1 1121 aa9.99□□□□□ -0.81
SEC23B-208ENST00000494645 UNC5CLQ8IV45 518 aa9.99□□□□□ -0.81
SEC23B-208ENST00000494645 TECPR2O15040 1411 aa9.99□□□□□ -0.81
SEC23B-208ENST00000494645 SRCAPQ6ZRS2 3230 aa9.98□□□□□ -0.81
SEC23B-208ENST00000494645 PRAM1Q96QH2 718 aa9.98□□□□□ -0.81
SEC23B-208ENST00000494645 PHF8Q9UPP1 1060 aa9.98□□□□□ -0.81
SEC23B-208ENST00000494645 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
SEC23B-208ENST00000494645 PIK3C2GO75747 1445 aa9.98□□□□□ -0.81
SEC23B-208ENST00000494645 PSME1Q06323 249 aa9.97□□□□□ -0.81
SEC23B-208ENST00000494645 PMFBP1Q8TBY8 1022 aa9.97□□□□□ -0.81
SEC23B-208ENST00000494645 C14orf93Q9H972 538 aaKnown RBP9.97□□□□□ -0.81
SEC23B-208ENST00000494645 RALGAPBQ86X10 1494 aa9.97□□□□□ -0.81
SEC23B-208ENST00000494645 SEPT12Q8IYM1 358 aa9.96□□□□□ -0.82
SEC23B-208ENST00000494645 HIRIP3Q9BW71 556 aaPredicted RBP9.96□□□□□ -0.82
SEC23B-208ENST00000494645 POGKQ9P215 609 aa9.96□□□□□ -0.82
SEC23B-208ENST00000494645 SSUH2Q9Y2M2 353 aa9.96□□□□□ -0.82
SEC23B-208ENST00000494645 DHX57Q6P158 1386 aaKnown RBP9.96□□□□□ -0.82
SEC23B-208ENST00000494645 EP400Q96L91 3159 aa9.96□□□□□ -0.82
SEC23B-208ENST00000494645 A0A0G2JS52 829 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms