RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 GAPVD1Q14C86 1478 aa5.02□□□□□ -1.61
ATG3-207ENST00000494571 SOGA1O94964 1423 aa5.02□□□□□ -1.61
ATG3-207ENST00000494571 CLIP1P30622 1438 aa5.02□□□□□ -1.61
ATG3-207ENST00000494571 SLC20A2Q08357 652 aa5.02□□□□□ -1.61
ATG3-207ENST00000494571 GRIPAP1Q4V328 841 aa5.02□□□□□ -1.61
ATG3-207ENST00000494571 CDCA8Q53HL2 280 aa5.02□□□□□ -1.61
ATG3-207ENST00000494571 ABCA10Q8WWZ4 1543 aa5.01□□□□□ -1.61
ATG3-207ENST00000494571 IRF6O14896 467 aa5.01□□□□□ -1.61
ATG3-207ENST00000494571 SRPK2P78362 688 aaKnown RBP5.01□□□□□ -1.61
ATG3-207ENST00000494571 ASTLQ6HA08 431 aaPredicted RBP5.01□□□□□ -1.61
ATG3-207ENST00000494571 TICAM2Q86XR7 235 aa5.01□□□□□ -1.61
ATG3-207ENST00000494571 CARD10Q9BWT7 1032 aa5.01□□□□□ -1.61
ATG3-207ENST00000494571 CHMP5Q9NZZ3 219 aa5.01□□□□□ -1.61
ATG3-207ENST00000494571 NOL7Q9UMY1 257 aaKnown RBP5.01□□□□□ -1.61
ATG3-207ENST00000494571 ERICH3Q5RHP9 1530 aa5.01□□□□□ -1.61
ATG3-207ENST00000494571 UHRF1BP1LA0JNW5 1464 aa5.01□□□□□ -1.61
ATG3-207ENST00000494571 GOLIM4O00461 696 aa5.01□□□□□ -1.61
ATG3-207ENST00000494571 ZNF500O60304 480 aaPredicted RBP5.01□□□□□ -1.61
ATG3-207ENST00000494571 SEMA3FQ13275 785 aa5.01□□□□□ -1.61
ATG3-207ENST00000494571 FAM50AQ14320 339 aaKnown RBP5.01□□□□□ -1.61
ATG3-207ENST00000494571 EGFL6Q8IUX8 553 aa5.01□□□□□ -1.61
ATG3-207ENST00000494571 C17orf53Q8N3J3 647 aaPredicted RBP5.01□□□□□ -1.61
ATG3-207ENST00000494571 MYRIPQ8NFW9 859 aa5.01□□□□□ -1.61
ATG3-207ENST00000494571 PPP1R9BQ96SB3 815 aa5.01□□□□□ -1.61
ATG3-207ENST00000494571 BCL2L12Q9HB09 334 aa5.01□□□□□ -1.61
ATG3-207ENST00000494571 CHADLQ6NUI6 762 aa5□□□□□ -1.61
ATG3-207ENST00000494571 SIRT1Q96EB6 747 aa5□□□□□ -1.61
ATG3-207ENST00000494571 CDCA7LQ96GN5 454 aa5□□□□□ -1.61
ATG3-207ENST00000494571 EIF2AK3Q9NZJ5 1116 aaKnown RBP5□□□□□ -1.61
ATG3-207ENST00000494571 TAOK2Q9UL54 1235 aa5□□□□□ -1.61
ATG3-207ENST00000494571 ISY1Q9ULR0 285 aaKnown RBP5□□□□□ -1.61
ATG3-207ENST00000494571 ZKSCAN5Q9Y2L8 839 aa5□□□□□ -1.61
ATG3-207ENST00000494571 ADAMTS12P58397 1594 aa5□□□□□ -1.61
ATG3-207ENST00000494571 GYS2P54840 703 aa5□□□□□ -1.61
ATG3-207ENST00000494571 TPRNQ4KMQ1 711 aa5□□□□□ -1.61
ATG3-207ENST00000494571 DNAJC21Q5F1R6 531 aaKnown RBP5□□□□□ -1.61
ATG3-207ENST00000494571 CENPQQ7L2Z9 268 aaPredicted RBP5□□□□□ -1.61
ATG3-207ENST00000494571 FAM212AQ96EL1 285 aa5□□□□□ -1.61
ATG3-207ENST00000494571 MYCBPQ99417 103 aaPredicted RBP5□□□□□ -1.61
ATG3-207ENST00000494571 CALCOCO1Q9P1Z2 691 aa5□□□□□ -1.61
ATG3-207ENST00000494571 FEZ2Q9UHY8 353 aaPredicted RBP5□□□□□ -1.61
ATG3-207ENST00000494571 GALR2O43603 387 aaPredicted RBP4.99□□□□□ -1.61
ATG3-207ENST00000494571 ZRANB1Q9UGI0 708 aa4.99□□□□□ -1.61
ATG3-207ENST00000494571 POLA1P09884 1462 aaPredicted RBP4.99□□□□□ -1.61
ATG3-207ENST00000494571 USP19O94966 1318 aa4.99□□□□□ -1.61
ATG3-207ENST00000494571 PHF14O94880 888 aa4.99□□□□□ -1.61
ATG3-207ENST00000494571 KIAA2012Q0VF49 1180 aa4.99□□□□□ -1.61
ATG3-207ENST00000494571 RNF214Q8ND24 703 aa4.99□□□□□ -1.61
ATG3-207ENST00000494571 DDX49Q9Y6V7 483 aaKnown RBP4.99□□□□□ -1.61
ATG3-207ENST00000494571 VPS8Q8N3P4 1428 aa4.99□□□□□ -1.61
ATG3-207ENST00000494571 RNF217Q8TC41 542 aa4.99□□□□□ -1.61
ATG3-207ENST00000494571 DRC1Q96MC2 740 aa4.99□□□□□ -1.61
ATG3-207ENST00000494571 YY1AP1Q9H869 796 aa4.99□□□□□ -1.61
ATG3-207ENST00000494571 SMC4Q9NTJ3 1288 aa4.99□□□□□ -1.61
ATG3-207ENST00000494571 CNTLNQ9NXG0 1405 aa4.98□□□□□ -1.61
ATG3-207ENST00000494571 SLFN14P0C7P3 912 aa4.98□□□□□ -1.61
ATG3-207ENST00000494571 EIF4G2P78344 907 aaKnown RBP eCLIP4.98□□□□□ -1.61
ATG3-207ENST00000494571 SART3Q15020 963 aaKnown RBP4.98□□□□□ -1.61
ATG3-207ENST00000494571 C10orf67Q8IYJ2 551 aa4.98□□□□□ -1.61
ATG3-207ENST00000494571 CEP83Q9Y592 693 aa4.98□□□□□ -1.61
ATG3-207ENST00000494571 PHLDB1Q86UU1 1377 aa4.98□□□□□ -1.61
ATG3-207ENST00000494571 CEP170Q5SW79 1584 aa4.98□□□□□ -1.61
ATG3-207ENST00000494571 GBP4Q96PP9 640 aa4.98□□□□□ -1.61
ATG3-207ENST00000494571 TSPYL1Q9H0U9 437 aa4.98□□□□□ -1.61
ATG3-207ENST00000494571 CCNB3Q8WWL7 1395 aa4.97□□□□□ -1.61
ATG3-207ENST00000494571 GTF2F1P35269 517 aaKnown RBP eCLIP4.97□□□□□ -1.61
ATG3-207ENST00000494571 HMGN5P82970 282 aaKnown RBP4.97□□□□□ -1.61
ATG3-207ENST00000494571 CAVIN1Q6NZI2 390 aaKnown RBP4.97□□□□□ -1.61
ATG3-207ENST00000494571 TNPO1Q92973 898 aaKnown RBP4.97□□□□□ -1.61
ATG3-207ENST00000494571 EFCC1Q9HA90 598 aa4.97□□□□□ -1.61
ATG3-207ENST00000494571 OGFRQ9NZT2 677 aa4.97□□□□□ -1.61
ATG3-207ENST00000494571 SH3BP1Q9Y3L3 701 aa4.97□□□□□ -1.61
ATG3-207ENST00000494571 CCDC88BA6NC98 1476 aa4.97□□□□□ -1.61
ATG3-207ENST00000494571 RUSC2Q8N2Y8 1516 aa4.97□□□□□ -1.61
ATG3-207ENST00000494571 TULP2O00295 520 aa4.97□□□□□ -1.61
ATG3-207ENST00000494571 DHX16O60231 1041 aaKnown RBP4.97□□□□□ -1.61
ATG3-207ENST00000494571 CCDC172P0C7W6 258 aa4.97□□□□□ -1.61
ATG3-207ENST00000494571 TDO2P48775 406 aa4.97□□□□□ -1.61
ATG3-207ENST00000494571 GABPB1Q06547 395 aaPredicted RBP4.97□□□□□ -1.61
ATG3-207ENST00000494571 RAD51AP2Q09MP3 1159 aa4.97□□□□□ -1.61
ATG3-207ENST00000494571 CALR3Q96L12 384 aaKnown RBP4.97□□□□□ -1.61
ATG3-207ENST00000494571 NCAPGQ9BPX3 1015 aa4.97□□□□□ -1.61
ATG3-207ENST00000494571 CCDC39Q9UFE4 941 aa4.97□□□□□ -1.61
ATG3-207ENST00000494571 SNAPC4Q5SXM2 1469 aa4.96□□□□□ -1.61
ATG3-207ENST00000494571 TEX14Q8IWB6 1497 aa4.96□□□□□ -1.61
ATG3-207ENST00000494571 WIZO95785 1651 aa4.96□□□□□ -1.61
ATG3-207ENST00000494571 MCCP23508 829 aa4.96□□□□□ -1.62
ATG3-207ENST00000494571 MFAP1P55081 439 aaKnown RBP4.96□□□□□ -1.62
ATG3-207ENST00000494571 HNRNPH2P55795 449 aaKnown RBP4.96□□□□□ -1.62
ATG3-207ENST00000494571 TERF2Q15554 542 aa4.96□□□□□ -1.62
ATG3-207ENST00000494571 HSCBQ8IWL3 235 aa4.96□□□□□ -1.62
ATG3-207ENST00000494571 RBSNQ9H1K0 784 aa4.96□□□□□ -1.62
ATG3-207ENST00000494571 RASSF4Q9H2L5 321 aa4.96□□□□□ -1.62
ATG3-207ENST00000494571 KDM2BQ8NHM5 1336 aa4.96□□□□□ -1.62
ATG3-207ENST00000494571 TRIM66O15016 1216 aa4.96□□□□□ -1.62
ATG3-207ENST00000494571 ST18O60284 1047 aa4.96□□□□□ -1.62
ATG3-207ENST00000494571 E2F4Q16254 413 aa4.96□□□□□ -1.62
ATG3-207ENST00000494571 HSP90AB3PQ58FF7 597 aa4.96□□□□□ -1.62
ATG3-207ENST00000494571 PRIMPOLQ96LW4 560 aa4.96□□□□□ -1.62
ATG3-207ENST00000494571 ST7Q9NRC1 585 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms