RNA–Protein interactions for RNA: ENST00000494559.5

PDZRN3-211, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-211ENST00000494559 ANKRD36BQ8N2N9 1353 aa20.63■□□□□ 0.89
PDZRN3-211ENST00000494559 SAFB2Q14151 953 aaKnown RBP eCLIP20.61■□□□□ 0.89
PDZRN3-211ENST00000494559 CABP2Q9NPB3 220 aa20.61■□□□□ 0.89
PDZRN3-211ENST00000494559 POLR3AO14802 1390 aaPredicted RBP20.6■□□□□ 0.89
PDZRN3-211ENST00000494559 NINLQ9Y2I6 1382 aa20.59■□□□□ 0.89
PDZRN3-211ENST00000494559 PRAM1Q96QH2 718 aa20.59■□□□□ 0.89
PDZRN3-211ENST00000494559 RCAN3Q9UKA8 241 aa20.59■□□□□ 0.89
PDZRN3-211ENST00000494559 PLEKHH1Q9ULM0 1364 aa20.59■□□□□ 0.89
PDZRN3-211ENST00000494559 CGNL1Q0VF96 1302 aa20.58■□□□□ 0.89
PDZRN3-211ENST00000494559 MORC1Q86VD1 984 aa20.58■□□□□ 0.88
PDZRN3-211ENST00000494559 ZNF521Q96K83 1311 aa20.58■□□□□ 0.88
PDZRN3-211ENST00000494559 DLC1Q96QB1 1528 aa20.57■□□□□ 0.88
PDZRN3-211ENST00000494559 ESF1Q9H501 851 aaKnown RBP20.57■□□□□ 0.88
PDZRN3-211ENST00000494559 NRXN3Q9Y4C0 1643 aa20.57■□□□□ 0.88
PDZRN3-211ENST00000494559 B4GALNT3Q6L9W6 998 aa20.57■□□□□ 0.88
PDZRN3-211ENST00000494559 RRP1P56182 461 aaKnown RBP20.56■□□□□ 0.88
PDZRN3-211ENST00000494559 POGKQ9P215 609 aa20.56■□□□□ 0.88
PDZRN3-211ENST00000494559 NSD2O96028 1365 aa20.56■□□□□ 0.88
PDZRN3-211ENST00000494559 MINK1Q8N4C8 1332 aaPredicted RBP20.55■□□□□ 0.88
PDZRN3-211ENST00000494559 SHPRHQ149N8 1683 aa20.55■□□□□ 0.88
PDZRN3-211ENST00000494559 ATAD2Q6PL18 1390 aa20.55■□□□□ 0.88
PDZRN3-211ENST00000494559 SRPK2P78362 688 aaKnown RBP20.54■□□□□ 0.88
PDZRN3-211ENST00000494559 A0A1W2PP64 1363 aa20.53■□□□□ 0.88
PDZRN3-211ENST00000494559 TNRQ92752 1358 aa20.53■□□□□ 0.88
PDZRN3-211ENST00000494559 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.52■□□□□ 0.88
PDZRN3-211ENST00000494559 ABCC11Q96J66 1382 aa20.52■□□□□ 0.88
PDZRN3-211ENST00000494559 CD163L1Q9NR16 1453 aa20.51■□□□□ 0.87
PDZRN3-211ENST00000494559 CCDC146Q8IYE0 955 aa20.51■□□□□ 0.87
PDZRN3-211ENST00000494559 UBR1Q8IWV7 1749 aa20.5■□□□□ 0.87
PDZRN3-211ENST00000494559 TNNT2P45379 298 aaPredicted RBP20.49■□□□□ 0.87
PDZRN3-211ENST00000494559 APAF1O14727 1248 aa20.48■□□□□ 0.87
PDZRN3-211ENST00000494559 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
PDZRN3-211ENST00000494559 CDK19Q9BWU1 502 aa20.48■□□□□ 0.87
PDZRN3-211ENST00000494559 GOLGA2Q08379 1002 aa20.47■□□□□ 0.87
PDZRN3-211ENST00000494559 ANKRD26Q9UPS8 1709 aa20.47■□□□□ 0.87
PDZRN3-211ENST00000494559 MTHFSP49914 203 aa20.46■□□□□ 0.87
PDZRN3-211ENST00000494559 NGEFQ8N5V2 710 aa20.46■□□□□ 0.87
PDZRN3-211ENST00000494559 TERF2IPQ9NYB0 399 aa20.46■□□□□ 0.87
PDZRN3-211ENST00000494559 METP08581 1390 aa20.46■□□□□ 0.87
PDZRN3-211ENST00000494559 KNDC1Q76NI1 1749 aa20.46■□□□□ 0.87
PDZRN3-211ENST00000494559 WAPLQ7Z5K2 1190 aa20.46■□□□□ 0.87
PDZRN3-211ENST00000494559 SLFN5Q08AF3 891 aa20.45■□□□□ 0.86
PDZRN3-211ENST00000494559 TRMT2AQ8IZ69 625 aaKnown RBP20.45■□□□□ 0.86
PDZRN3-211ENST00000494559 TMEM2Q9UHN6 1383 aa20.45■□□□□ 0.86
PDZRN3-211ENST00000494559 MED14O60244 1454 aa20.45■□□□□ 0.86
PDZRN3-211ENST00000494559 NLRP1Q9C000 1473 aa20.45■□□□□ 0.86
PDZRN3-211ENST00000494559 HDGFP51858 240 aaKnown RBP20.44■□□□□ 0.86
PDZRN3-211ENST00000494559 CCDC136Q96JN2 1154 aa20.43■□□□□ 0.86
PDZRN3-211ENST00000494559 RBM19Q9Y4C8 960 aaKnown RBP20.42■□□□□ 0.86
PDZRN3-211ENST00000494559 TECPR2O15040 1411 aa20.42■□□□□ 0.86
PDZRN3-211ENST00000494559 FYB1O15117 783 aa20.41■□□□□ 0.86
PDZRN3-211ENST00000494559 EXOC6Q8TAG9 804 aa20.41■□□□□ 0.86
PDZRN3-211ENST00000494559 CFAP53Q96M91 514 aa20.41■□□□□ 0.86
PDZRN3-211ENST00000494559 MYT1Q01538 1121 aa20.41■□□□□ 0.86
PDZRN3-211ENST00000494559 SIRT1Q96EB6 747 aa20.41■□□□□ 0.86
PDZRN3-211ENST00000494559 CABP1Q9NZU7 370 aa20.41■□□□□ 0.86
PDZRN3-211ENST00000494559 HDGFL2Q7Z4V5 671 aaPredicted RBP20.4■□□□□ 0.86
PDZRN3-211ENST00000494559 FAM135BQ49AJ0 1406 aa20.4■□□□□ 0.86
PDZRN3-211ENST00000494559 IQSEC2Q5JU85 1478 aa20.4■□□□□ 0.86
PDZRN3-211ENST00000494559 KIF20BQ96Q89 1820 aa20.4■□□□□ 0.86
PDZRN3-211ENST00000494559 CPS1P31327 1500 aa20.4■□□□□ 0.86
PDZRN3-211ENST00000494559 GGNBP2Q9H3C7 697 aa20.39■□□□□ 0.86
PDZRN3-211ENST00000494559 SPINK5Q9NQ38 1064 aaPredicted RBP20.39■□□□□ 0.86
PDZRN3-211ENST00000494559 ATP7BP35670 1465 aa20.39■□□□□ 0.85
PDZRN3-211ENST00000494559 C3P01024 1663 aa20.38■□□□□ 0.85
PDZRN3-211ENST00000494559 RUNDC1Q96C34 613 aa20.38■□□□□ 0.85
PDZRN3-211ENST00000494559 PLIN1O60240 522 aa20.37■□□□□ 0.85
PDZRN3-211ENST00000494559 ADAMTS13Q76LX8 1427 aa20.37■□□□□ 0.85
PDZRN3-211ENST00000494559 E9PSI1 815 aa20.36■□□□□ 0.85
PDZRN3-211ENST00000494559 TXNDC2Q86VQ3 553 aa20.36■□□□□ 0.85
PDZRN3-211ENST00000494559 COL3A1P02461 1466 aaPredicted RBP20.36■□□□□ 0.85
PDZRN3-211ENST00000494559 WASLO00401 505 aaPredicted RBP20.36■□□□□ 0.85
PDZRN3-211ENST00000494559 DMRT2Q9Y5R5 561 aa20.36■□□□□ 0.85
PDZRN3-211ENST00000494559 CEBPAP49715 358 aaPredicted RBP20.35■□□□□ 0.85
PDZRN3-211ENST00000494559 WWC1Q8IX03 1113 aa20.35■□□□□ 0.85
PDZRN3-211ENST00000494559 NKTRP30414 1462 aaKnown RBP20.35■□□□□ 0.85
PDZRN3-211ENST00000494559 FER1L4A9Z1Z3 1794 aa20.35■□□□□ 0.85
PDZRN3-211ENST00000494559 PLEKHG1Q9ULL1 1385 aa20.34■□□□□ 0.85
PDZRN3-211ENST00000494559 PHF23Q9BUL5 403 aaPredicted RBP20.34■□□□□ 0.85
PDZRN3-211ENST00000494559 LTKP29376 864 aa20.33■□□□□ 0.85
PDZRN3-211ENST00000494559 TCP11L2Q8N4U5 519 aa20.33■□□□□ 0.85
PDZRN3-211ENST00000494559 CPSF1Q10570 1443 aaKnown RBP20.33■□□□□ 0.84
PDZRN3-211ENST00000494559 NCBP3Q53F19 620 aaKnown RBP20.31■□□□□ 0.84
PDZRN3-211ENST00000494559 ADGRB2O60241 1585 aa20.31■□□□□ 0.84
PDZRN3-211ENST00000494559 PPIP5K1Q6PFW1 1433 aa20.3■□□□□ 0.84
PDZRN3-211ENST00000494559 SLIT1O75093 1534 aa20.3■□□□□ 0.84
PDZRN3-211ENST00000494559 CRBNQ96SW2 442 aa20.3■□□□□ 0.84
PDZRN3-211ENST00000494559 ARHGAP23Q9P227 1491 aa20.3■□□□□ 0.84
PDZRN3-211ENST00000494559 CCDC27Q2M243 656 aa20.3■□□□□ 0.84
PDZRN3-211ENST00000494559 PNPLA6Q8IY17 1366 aa20.3■□□□□ 0.84
PDZRN3-211ENST00000494559 ROBO2Q9HCK4 1378 aa20.3■□□□□ 0.84
PDZRN3-211ENST00000494559 U2AF1L5P0DN76 240 aaPredicted RBP20.29■□□□□ 0.84
PDZRN3-211ENST00000494559 U2AF1Q01081 240 aaKnown RBP eCLIP20.29■□□□□ 0.84
PDZRN3-211ENST00000494559 C20orf194Q5TEA3 1177 aa20.29■□□□□ 0.84
PDZRN3-211ENST00000494559 CDC42BPGQ6DT37 1551 aa20.28■□□□□ 0.84
PDZRN3-211ENST00000494559 EDC4Q6P2E9 1401 aaKnown RBP20.28■□□□□ 0.84
PDZRN3-211ENST00000494559 NUDT16Q96DE0 195 aaKnown RBP20.28■□□□□ 0.84
PDZRN3-211ENST00000494559 RRP7AQ9Y3A4 280 aaKnown RBP20.28■□□□□ 0.84
PDZRN3-211ENST00000494559 MON2Q7Z3U7 1717 aa20.27■□□□□ 0.84
PDZRN3-211ENST00000494559 NEUROD2Q15784 382 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms