RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 ZMYM3Q14202 1370 aa11.5□□□□□ -0.57
RAF1-212ENST00000494557 NEFLP07196 543 aa11.49□□□□□ -0.57
RAF1-212ENST00000494557 ANKRD36BQ8N2N9 1353 aa11.49□□□□□ -0.57
RAF1-212ENST00000494557 ABCC11Q96J66 1382 aa11.49□□□□□ -0.57
RAF1-212ENST00000494557 PHRF1Q9P1Y6 1649 aaKnown RBP11.48□□□□□ -0.57
RAF1-212ENST00000494557 SLIT1O75093 1534 aa11.48□□□□□ -0.57
RAF1-212ENST00000494557 PANK3Q9H999 370 aa11.48□□□□□ -0.57
RAF1-212ENST00000494557 PLEKHH1Q9ULM0 1364 aa11.47□□□□□ -0.57
RAF1-212ENST00000494557 TSPOAP1O95153 1857 aa11.47□□□□□ -0.57
RAF1-212ENST00000494557 PPP2R1AP30153 589 aa11.47□□□□□ -0.57
RAF1-212ENST00000494557 DLG5Q8TDM6 1919 aa11.47□□□□□ -0.57
RAF1-212ENST00000494557 PNPLA6Q8IY17 1366 aa11.47□□□□□ -0.57
RAF1-212ENST00000494557 ANP32EQ9BTT0 268 aa11.46□□□□□ -0.57
RAF1-212ENST00000494557 YTHDC2Q9H6S0 1430 aaKnown RBP11.46□□□□□ -0.58
RAF1-212ENST00000494557 KIF3BO15066 747 aa11.46□□□□□ -0.58
RAF1-212ENST00000494557 FAM135BQ49AJ0 1406 aa11.45□□□□□ -0.58
RAF1-212ENST00000494557 BCL11AQ9H165 835 aa11.45□□□□□ -0.58
RAF1-212ENST00000494557 MAP2P11137 1827 aaKnown RBP11.45□□□□□ -0.58
RAF1-212ENST00000494557 SLC52A1Q9NWF4 448 aa11.45□□□□□ -0.58
RAF1-212ENST00000494557 NKTRP30414 1462 aaKnown RBP11.45□□□□□ -0.58
RAF1-212ENST00000494557 ARHGAP23Q9P227 1491 aa11.45□□□□□ -0.58
RAF1-212ENST00000494557 LRRC37A3O60309 1634 aa11.45□□□□□ -0.58
RAF1-212ENST00000494557 RBM19Q9Y4C8 960 aaKnown RBP11.45□□□□□ -0.58
RAF1-212ENST00000494557 RRP1P56182 461 aaKnown RBP11.44□□□□□ -0.58
RAF1-212ENST00000494557 PPIP5K1Q6PFW1 1433 aa11.44□□□□□ -0.58
RAF1-212ENST00000494557 CARD14Q9BXL6 1004 aa11.43□□□□□ -0.58
RAF1-212ENST00000494557 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
RAF1-212ENST00000494557 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.43□□□□□ -0.58
RAF1-212ENST00000494557 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
RAF1-212ENST00000494557 FAM9BQ8IZU0 186 aa11.43□□□□□ -0.58
RAF1-212ENST00000494557 KDM2BQ8NHM5 1336 aa11.42□□□□□ -0.58
RAF1-212ENST00000494557 CPSF1Q10570 1443 aaKnown RBP11.42□□□□□ -0.58
RAF1-212ENST00000494557 TMC1Q8TDI8 760 aa11.42□□□□□ -0.58
RAF1-212ENST00000494557 FER1L4A9Z1Z3 1794 aa11.42□□□□□ -0.58
RAF1-212ENST00000494557 SIRT1Q96EB6 747 aa11.41□□□□□ -0.58
RAF1-212ENST00000494557 CENPJQ9HC77 1338 aaPredicted RBP11.41□□□□□ -0.58
RAF1-212ENST00000494557 DUSP27Q5VZP5 1158 aa11.41□□□□□ -0.58
RAF1-212ENST00000494557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.4□□□□□ -0.58
RAF1-212ENST00000494557 EIF5BO60841 1220 aaKnown RBP11.39□□□□□ -0.59
RAF1-212ENST00000494557 NSD3Q9BZ95 1437 aa11.39□□□□□ -0.59
RAF1-212ENST00000494557 TUBGCP6Q96RT7 1819 aa11.39□□□□□ -0.59
RAF1-212ENST00000494557 CFAP70Q5T0N1 1121 aa11.38□□□□□ -0.59
RAF1-212ENST00000494557 CAMTA1Q9Y6Y1 1673 aa11.38□□□□□ -0.59
RAF1-212ENST00000494557 RGL3Q3MIN7 710 aa11.38□□□□□ -0.59
RAF1-212ENST00000494557 CDK12Q9NYV4 1490 aaPredicted RBP11.37□□□□□ -0.59
RAF1-212ENST00000494557 ATAD2Q6PL18 1390 aa11.37□□□□□ -0.59
RAF1-212ENST00000494557 ZNF326Q5BKZ1 582 aaKnown RBP11.37□□□□□ -0.59
RAF1-212ENST00000494557 MS4A1P11836 297 aa11.37□□□□□ -0.59
RAF1-212ENST00000494557 SLFN5Q08AF3 891 aa11.37□□□□□ -0.59
RAF1-212ENST00000494557 RTN4Q9NQC3 1192 aaKnown RBP11.36□□□□□ -0.59
RAF1-212ENST00000494557 PEAK1Q9H792 1746 aa11.36□□□□□ -0.59
RAF1-212ENST00000494557 CHD2O14647 1828 aaKnown RBP11.35□□□□□ -0.59
RAF1-212ENST00000494557 RCAN3Q9UKA8 241 aa11.35□□□□□ -0.59
RAF1-212ENST00000494557 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
RAF1-212ENST00000494557 PLEKHG5O94827 1062 aa11.35□□□□□ -0.59
RAF1-212ENST00000494557 ADAMTS8Q9UP79 889 aa11.34□□□□□ -0.59
RAF1-212ENST00000494557 LMTK3Q96Q04 1460 aa11.34□□□□□ -0.59
RAF1-212ENST00000494557 AAMPQ13685 434 aa11.34□□□□□ -0.59
RAF1-212ENST00000494557 AATKQ6ZMQ8 1374 aa11.34□□□□□ -0.59
RAF1-212ENST00000494557 PTCH1Q13635 1447 aa11.33□□□□□ -0.6
RAF1-212ENST00000494557 SSH2Q76I76 1423 aa11.33□□□□□ -0.6
RAF1-212ENST00000494557 A0A1W2PP64 1363 aa11.33□□□□□ -0.6
RAF1-212ENST00000494557 MSH5O43196 834 aa11.33□□□□□ -0.6
RAF1-212ENST00000494557 NPM1P06748 294 aaKnown RBP eCLIP11.33□□□□□ -0.6
RAF1-212ENST00000494557 KNSTRNQ9Y448 316 aa11.33□□□□□ -0.6
RAF1-212ENST00000494557 PIK3C2AO00443 1686 aa11.33□□□□□ -0.6
RAF1-212ENST00000494557 ADAMTS13Q76LX8 1427 aa11.32□□□□□ -0.6
RAF1-212ENST00000494557 CGNL1Q0VF96 1302 aa11.32□□□□□ -0.6
RAF1-212ENST00000494557 CACNA1FO60840 1977 aa11.32□□□□□ -0.6
RAF1-212ENST00000494557 ADAMTS7Q9UKP4 1686 aa11.32□□□□□ -0.6
RAF1-212ENST00000494557 ADAMTSL3P82987 1691 aa11.31□□□□□ -0.6
RAF1-212ENST00000494557 RIMS2Q9UQ26 1411 aa11.31□□□□□ -0.6
RAF1-212ENST00000494557 CRYBG1Q9Y4K1 1723 aa11.31□□□□□ -0.6
RAF1-212ENST00000494557 NWD1Q149M9 1564 aa11.3□□□□□ -0.6
RAF1-212ENST00000494557 EDC4Q6P2E9 1401 aaKnown RBP11.3□□□□□ -0.6
RAF1-212ENST00000494557 IDI1Q13907 227 aa11.3□□□□□ -0.6
RAF1-212ENST00000494557 EVC2Q86UK5 1308 aa11.3□□□□□ -0.6
RAF1-212ENST00000494557 RGPD8O14715 1765 aaPredicted RBP11.29□□□□□ -0.6
RAF1-212ENST00000494557 IL16Q14005 1332 aa11.28□□□□□ -0.6
RAF1-212ENST00000494557 PLEKHF1Q96S99 279 aa11.28□□□□□ -0.6
RAF1-212ENST00000494557 TCERG1O14776 1098 aaKnown RBP11.28□□□□□ -0.6
RAF1-212ENST00000494557 CT47B1P0C2W7 299 aaPredicted RBP11.28□□□□□ -0.6
RAF1-212ENST00000494557 WDR63Q8IWG1 891 aa11.28□□□□□ -0.6
RAF1-212ENST00000494557 FAM208AQ9UK61 1670 aaKnown RBP11.28□□□□□ -0.6
RAF1-212ENST00000494557 BRPF1P55201 1214 aaPredicted RBP11.28□□□□□ -0.6
RAF1-212ENST00000494557 PIK3R4Q99570 1358 aa11.27□□□□□ -0.61
RAF1-212ENST00000494557 PLEKHG1Q9ULL1 1385 aa11.27□□□□□ -0.61
RAF1-212ENST00000494557 E9PSI1 815 aa11.27□□□□□ -0.61
RAF1-212ENST00000494557 RAPGEF3O95398 923 aa11.27□□□□□ -0.61
RAF1-212ENST00000494557 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
RAF1-212ENST00000494557 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
RAF1-212ENST00000494557 CC2D1BQ5T0F9 858 aaKnown RBP11.26□□□□□ -0.61
RAF1-212ENST00000494557 CDCA7LQ96GN5 454 aa11.26□□□□□ -0.61
RAF1-212ENST00000494557 SIPA1L3O60292 1781 aaPredicted RBP11.26□□□□□ -0.61
RAF1-212ENST00000494557 MED1Q15648 1581 aaPredicted RBP11.25□□□□□ -0.61
RAF1-212ENST00000494557 LMO7Q8WWI1 1683 aa11.25□□□□□ -0.61
RAF1-212ENST00000494557 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
RAF1-212ENST00000494557 PDE3AQ14432 1141 aa11.25□□□□□ -0.61
RAF1-212ENST00000494557 MST1RQ04912 1400 aa11.25□□□□□ -0.61
RAF1-212ENST00000494557 BCANQ96GW7 911 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms