RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 FAM135BQ49AJ0 1406 aa28.39■■■□□ 2.14
KPNA1-210ENST00000494339 MYOM1P52179 1685 aa28.39■■■□□ 2.14
KPNA1-210ENST00000494339 SIRT1Q96EB6 747 aa28.38■■■□□ 2.13
KPNA1-210ENST00000494339 PANK3Q9H999 370 aa28.35■■■□□ 2.13
KPNA1-210ENST00000494339 CABP2Q9NPB3 220 aa28.35■■■□□ 2.13
KPNA1-210ENST00000494339 PIK3R4Q99570 1358 aa28.34■■■□□ 2.13
KPNA1-210ENST00000494339 XRN1Q8IZH2 1706 aaKnown RBP28.33■■■□□ 2.13
KPNA1-210ENST00000494339 SRPK2P78362 688 aaKnown RBP28.33■■■□□ 2.13
KPNA1-210ENST00000494339 CNGB1Q14028 1251 aaPredicted RBP28.31■■■□□ 2.12
KPNA1-210ENST00000494339 CHD2O14647 1828 aaKnown RBP28.31■■■□□ 2.12
KPNA1-210ENST00000494339 PTCH1Q13635 1447 aa28.3■■■□□ 2.12
KPNA1-210ENST00000494339 KCNA6P17658 529 aa28.3■■■□□ 2.12
KPNA1-210ENST00000494339 TMC1Q8TDI8 760 aa28.3■■■□□ 2.12
KPNA1-210ENST00000494339 CDK19Q9BWU1 502 aa28.3■■■□□ 2.12
KPNA1-210ENST00000494339 PUS7Q96PZ0 661 aaKnown RBP28.29■■■□□ 2.12
KPNA1-210ENST00000494339 PER1O15534 1290 aaPredicted RBP28.27■■■□□ 2.12
KPNA1-210ENST00000494339 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.27■■■□□ 2.12
KPNA1-210ENST00000494339 SLC12A5Q9H2X9 1139 aa28.26■■■□□ 2.11
KPNA1-210ENST00000494339 PRKRIP1Q9H875 184 aaPredicted RBP28.26■■■□□ 2.11
KPNA1-210ENST00000494339 WASLO00401 505 aaPredicted RBP28.24■■■□□ 2.11
KPNA1-210ENST00000494339 ATAD2Q6PL18 1390 aa28.23■■■□□ 2.11
KPNA1-210ENST00000494339 ADGRB2O60241 1585 aa28.2■■■□□ 2.1
KPNA1-210ENST00000494339 AEBP2Q6ZN18 517 aaPredicted RBP28.2■■■□□ 2.1
KPNA1-210ENST00000494339 KNSTRNQ9Y448 316 aa28.2■■■□□ 2.1
KPNA1-210ENST00000494339 STRCQ7RTU9 1775 aa28.19■■■□□ 2.1
KPNA1-210ENST00000494339 CARD14Q9BXL6 1004 aa28.16■■■□□ 2.1
KPNA1-210ENST00000494339 CCER2I3L3R5 266 aa28.16■■■□□ 2.1
KPNA1-210ENST00000494339 NINLQ9Y2I6 1382 aa28.15■■■□□ 2.1
KPNA1-210ENST00000494339 CC2D1BQ5T0F9 858 aaKnown RBP28.15■■■□□ 2.1
KPNA1-210ENST00000494339 NWD1Q149M9 1564 aa28.14■■■□□ 2.1
KPNA1-210ENST00000494339 RBM33Q96EV2 1170 aaKnown RBP28.14■■■□□ 2.09
KPNA1-210ENST00000494339 KTN1Q86UP2 1357 aaKnown RBP28.14■■■□□ 2.09
KPNA1-210ENST00000494339 CABP1Q9NZU7 370 aa28.12■■■□□ 2.09
KPNA1-210ENST00000494339 ANKRD36BQ8N2N9 1353 aa28.12■■■□□ 2.09
KPNA1-210ENST00000494339 NUDT16Q96DE0 195 aaKnown RBP28.12■■■□□ 2.09
KPNA1-210ENST00000494339 AMER1Q5JTC6 1135 aaPredicted RBP28.1■■■□□ 2.09
KPNA1-210ENST00000494339 NSD3Q9BZ95 1437 aa28.1■■■□□ 2.09
KPNA1-210ENST00000494339 NUTM2FA1L443 756 aa28.1■■■□□ 2.09
KPNA1-210ENST00000494339 A0A1W2PP64 1363 aa28.09■■■□□ 2.09
KPNA1-210ENST00000494339 ATP7BP35670 1465 aa28.09■■■□□ 2.09
KPNA1-210ENST00000494339 PRR36Q9H6K5 1346 aa28.09■■■□□ 2.09
KPNA1-210ENST00000494339 NALCNQ8IZF0 1738 aa28.08■■■□□ 2.09
KPNA1-210ENST00000494339 PPIP5K1Q6PFW1 1433 aa28.08■■■□□ 2.09
KPNA1-210ENST00000494339 RALBP1Q15311 655 aa28.08■■■□□ 2.09
KPNA1-210ENST00000494339 CD163L1Q9NR16 1453 aa28.07■■■□□ 2.08
KPNA1-210ENST00000494339 TERF2IPQ9NYB0 399 aa28.07■■■□□ 2.08
KPNA1-210ENST00000494339 CCDC61Q9Y6R9 512 aa28.07■■■□□ 2.08
KPNA1-210ENST00000494339 PARD3Q8TEW0 1356 aa28.07■■■□□ 2.08
KPNA1-210ENST00000494339 STRCP1A6NGW2 1772 aa28.06■■■□□ 2.08
KPNA1-210ENST00000494339 CCDC184Q52MB2 194 aa28.04■■■□□ 2.08
KPNA1-210ENST00000494339 PROSER2Q86WR7 435 aaPredicted RBP28.04■■■□□ 2.08
KPNA1-210ENST00000494339 NKTRP30414 1462 aaKnown RBP28.04■■■□□ 2.08
KPNA1-210ENST00000494339 HDGFL2Q7Z4V5 671 aaPredicted RBP28.04■■■□□ 2.08
KPNA1-210ENST00000494339 NPC1L1Q9UHC9 1359 aa28.02■■■□□ 2.08
KPNA1-210ENST00000494339 C14orf37Q86TY3 774 aa28.02■■■□□ 2.08
KPNA1-210ENST00000494339 YTHDC1Q96MU7 727 aaKnown RBP28.02■■■□□ 2.08
KPNA1-210ENST00000494339 USP32Q8NFA0 1604 aa28.02■■■□□ 2.08
KPNA1-210ENST00000494339 ADGRL3Q9HAR2 1447 aa28.01■■■□□ 2.07
KPNA1-210ENST00000494339 MYBBP1AQ9BQG0 1328 aaKnown RBP28.01■■■□□ 2.07
KPNA1-210ENST00000494339 CENPBP07199 599 aaPredicted RBP28.01■■■□□ 2.07
KPNA1-210ENST00000494339 TOPAZ1Q8N9V7 1692 aa28.01■■■□□ 2.07
KPNA1-210ENST00000494339 RGPD8O14715 1765 aaPredicted RBP28■■■□□ 2.07
KPNA1-210ENST00000494339 CDC42BPGQ6DT37 1551 aa27.99■■■□□ 2.07
KPNA1-210ENST00000494339 FMN2Q9NZ56 1722 aa27.99■■■□□ 2.07
KPNA1-210ENST00000494339 MRS2Q9HD23 443 aa27.99■■■□□ 2.07
KPNA1-210ENST00000494339 CGNL1Q0VF96 1302 aa27.99■■■□□ 2.07
KPNA1-210ENST00000494339 CPSF1Q10570 1443 aaKnown RBP27.96■■■□□ 2.07
KPNA1-210ENST00000494339 ITSN1Q15811 1721 aa27.96■■■□□ 2.07
KPNA1-210ENST00000494339 ANKARQ7Z5J8 1434 aa27.94■■■□□ 2.06
KPNA1-210ENST00000494339 TMEM94Q12767 1356 aa27.93■■■□□ 2.06
KPNA1-210ENST00000494339 AKAP12Q02952 1782 aa27.93■■■□□ 2.06
KPNA1-210ENST00000494339 PLEKHG3A1L390 1219 aa27.92■■■□□ 2.06
KPNA1-210ENST00000494339 ZNF335Q9H4Z2 1342 aaPredicted RBP27.92■■■□□ 2.06
KPNA1-210ENST00000494339 NLRP13Q86W25 1043 aa27.91■■■□□ 2.06
KPNA1-210ENST00000494339 PMFBP1Q8TBY8 1022 aa27.91■■■□□ 2.06
KPNA1-210ENST00000494339 MON2Q7Z3U7 1717 aa27.91■■■□□ 2.06
KPNA1-210ENST00000494339 ACEP12821 1306 aa27.91■■■□□ 2.06
KPNA1-210ENST00000494339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.9■■■□□ 2.06
KPNA1-210ENST00000494339 DMRT2Q9Y5R5 561 aa27.9■■■□□ 2.06
KPNA1-210ENST00000494339 PPP2R1AP30153 589 aa27.88■■■□□ 2.05
KPNA1-210ENST00000494339 MORC1Q86VD1 984 aa27.88■■■□□ 2.05
KPNA1-210ENST00000494339 ZNF692Q9BU19 519 aaPredicted RBP27.88■■■□□ 2.05
KPNA1-210ENST00000494339 BRD4O60885 1362 aaPredicted RBP27.88■■■□□ 2.05
KPNA1-210ENST00000494339 NSD2O96028 1365 aa27.88■■■□□ 2.05
KPNA1-210ENST00000494339 C19orf44Q9H6X5 657 aa27.88■■■□□ 2.05
KPNA1-210ENST00000494339 EDC4Q6P2E9 1401 aaKnown RBP27.88■■■□□ 2.05
KPNA1-210ENST00000494339 FYB1O15117 783 aa27.87■■■□□ 2.05
KPNA1-210ENST00000494339 GGNBP2Q9H3C7 697 aa27.87■■■□□ 2.05
KPNA1-210ENST00000494339 KIF20BQ96Q89 1820 aa27.87■■■□□ 2.05
KPNA1-210ENST00000494339 TNNT2P45379 298 aaPredicted RBP27.85■■■□□ 2.05
KPNA1-210ENST00000494339 NGDNQ8NEJ9 315 aaKnown RBP27.85■■■□□ 2.05
KPNA1-210ENST00000494339 NCOA3Q9Y6Q9 1424 aa27.84■■■□□ 2.05
KPNA1-210ENST00000494339 FAM9BQ8IZU0 186 aa27.84■■■□□ 2.05
KPNA1-210ENST00000494339 XIRP1Q702N8 1843 aaKnown RBP27.83■■■□□ 2.05
KPNA1-210ENST00000494339 POLR3AO14802 1390 aaPredicted RBP27.83■■■□□ 2.05
KPNA1-210ENST00000494339 ANKRD26Q9UPS8 1709 aa27.83■■■□□ 2.05
KPNA1-210ENST00000494339 USP6P35125 1406 aa27.82■■■□□ 2.04
KPNA1-210ENST00000494339 LRRC7Q96NW7 1537 aa27.81■■■□□ 2.04
KPNA1-210ENST00000494339 ESCO1Q5FWF5 840 aa27.8■■■□□ 2.04
KPNA1-210ENST00000494339 NRKQ7Z2Y5 1582 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms