RNA–Protein interactions for RNA: ENST00000494317.1

LCN2-207, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 625 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-207ENST00000494317 WAPLQ7Z5K2 1190 aa33.76■■■□□ 2.99
LCN2-207ENST00000494317 LAMC1P11047 1609 aa33.75■■■□□ 2.99
LCN2-207ENST00000494317 MYOM2P54296 1465 aa33.74■■■□□ 2.99
LCN2-207ENST00000494317 NRXN1Q9ULB1 1477 aa33.74■■■□□ 2.99
LCN2-207ENST00000494317 PNPLA6Q8IY17 1366 aa33.73■■■□□ 2.99
LCN2-207ENST00000494317 KNDC1Q76NI1 1749 aa33.73■■■□□ 2.99
LCN2-207ENST00000494317 YTHDC2Q9H6S0 1430 aaKnown RBP33.73■■■□□ 2.99
LCN2-207ENST00000494317 C14orf93Q9H972 538 aaKnown RBP33.72■■■□□ 2.99
LCN2-207ENST00000494317 PLEKHH1Q9ULM0 1364 aa33.72■■■□□ 2.99
LCN2-207ENST00000494317 ZNF772Q68DY9 489 aaPredicted RBP33.71■■■□□ 2.99
LCN2-207ENST00000494317 SOS2Q07890 1332 aaPredicted RBP33.69■■■□□ 2.98
LCN2-207ENST00000494317 CFAP70Q5T0N1 1121 aa33.68■■■□□ 2.98
LCN2-207ENST00000494317 HRCP23327 699 aa33.66■■■□□ 2.98
LCN2-207ENST00000494317 ESCO1Q5FWF5 840 aa33.66■■■□□ 2.98
LCN2-207ENST00000494317 DHX57Q6P158 1386 aaKnown RBP33.62■■■□□ 2.97
LCN2-207ENST00000494317 NUTM2FA1L443 756 aa33.62■■■□□ 2.97
LCN2-207ENST00000494317 SIRT1Q96EB6 747 aa33.62■■■□□ 2.97
LCN2-207ENST00000494317 AFF2P51816 1311 aa33.61■■■□□ 2.97
LCN2-207ENST00000494317 NPHP3Q7Z494 1330 aa33.59■■■□□ 2.97
LCN2-207ENST00000494317 C8orf37Q96NL8 207 aa33.58■■■□□ 2.97
LCN2-207ENST00000494317 FMN2Q9NZ56 1722 aa33.56■■■□□ 2.96
LCN2-207ENST00000494317 PXDNQ92626 1479 aa33.56■■■□□ 2.96
LCN2-207ENST00000494317 FOXO3O43524 673 aa33.55■■■□□ 2.96
LCN2-207ENST00000494317 ADAMTS2O95450 1211 aa33.55■■■□□ 2.96
LCN2-207ENST00000494317 RXRBP28702 533 aa33.53■■■□□ 2.96
LCN2-207ENST00000494317 XPCQ01831 940 aaPredicted RBP33.53■■■□□ 2.96
LCN2-207ENST00000494317 KDM2AQ9Y2K7 1162 aa33.53■■■□□ 2.96
LCN2-207ENST00000494317 DCAF11Q8TEB1 546 aa33.52■■■□□ 2.96
LCN2-207ENST00000494317 PRAM1Q96QH2 718 aa33.52■■■□□ 2.96
LCN2-207ENST00000494317 ADGRB1O14514 1584 aa33.51■■■□□ 2.95
LCN2-207ENST00000494317 COL22A1Q8NFW1 1626 aaPredicted RBP33.5■■■□□ 2.95
LCN2-207ENST00000494317 SAFB2Q14151 953 aaKnown RBP eCLIP33.5■■■□□ 2.95
LCN2-207ENST00000494317 DLC1Q96QB1 1528 aa33.49■■■□□ 2.95
LCN2-207ENST00000494317 NGLY1Q96IV0 654 aa33.48■■■□□ 2.95
LCN2-207ENST00000494317 POGKQ9P215 609 aa33.46■■■□□ 2.95
LCN2-207ENST00000494317 KIF1AQ12756 1690 aa33.45■■■□□ 2.95
LCN2-207ENST00000494317 STAC3Q96MF2 364 aa33.44■■■□□ 2.94
LCN2-207ENST00000494317 QTRT2Q9H974 415 aaKnown RBP33.44■■■□□ 2.94
LCN2-207ENST00000494317 CDK12Q9NYV4 1490 aaPredicted RBP33.44■■■□□ 2.94
LCN2-207ENST00000494317 TRAK1Q9UPV9 953 aa33.43■■■□□ 2.94
LCN2-207ENST00000494317 PHF8Q9UPP1 1060 aa33.39■■■□□ 2.94
LCN2-207ENST00000494317 RGPD8O14715 1765 aaPredicted RBP33.39■■■□□ 2.94
LCN2-207ENST00000494317 RBM6P78332 1123 aaKnown RBP33.38■■■□□ 2.93
LCN2-207ENST00000494317 SPATA31A3Q5VYP0 1347 aa33.37■■■□□ 2.93
LCN2-207ENST00000494317 KRT28Q7Z3Y7 464 aa33.37■■■□□ 2.93
LCN2-207ENST00000494317 ADGRB2O60241 1585 aa33.37■■■□□ 2.93
LCN2-207ENST00000494317 USP21Q9UK80 565 aa33.36■■■□□ 2.93
LCN2-207ENST00000494317 FNBP4Q8N3X1 1017 aaPredicted RBP33.35■■■□□ 2.93
LCN2-207ENST00000494317 RGS12O14924 1447 aa33.34■■■□□ 2.93
LCN2-207ENST00000494317 HIRIP3Q9BW71 556 aaPredicted RBP33.33■■■□□ 2.93
LCN2-207ENST00000494317 ANKARQ7Z5J8 1434 aa33.33■■■□□ 2.93
LCN2-207ENST00000494317 MINK1Q8N4C8 1332 aaPredicted RBP33.32■■■□□ 2.93
LCN2-207ENST00000494317 USP32Q8NFA0 1604 aa33.32■■■□□ 2.92
LCN2-207ENST00000494317 UPF1Q92900 1129 aaKnown RBP eCLIP33.3■■■□□ 2.92
LCN2-207ENST00000494317 PSME1Q06323 249 aa33.29■■■□□ 2.92
LCN2-207ENST00000494317 TRPC5Q9UL62 973 aaPredicted RBP33.29■■■□□ 2.92
LCN2-207ENST00000494317 MARF1Q9Y4F3 1742 aaKnown RBP33.28■■■□□ 2.92
LCN2-207ENST00000494317 TNS3Q68CZ2 1445 aa33.28■■■□□ 2.92
LCN2-207ENST00000494317 PMFBP1Q8TBY8 1022 aa33.27■■■□□ 2.92
LCN2-207ENST00000494317 ATRNO75882 1429 aa33.27■■■□□ 2.92
LCN2-207ENST00000494317 SBNO1A3KN83 1393 aa33.24■■■□□ 2.91
LCN2-207ENST00000494317 EIF3AQ14152 1382 aaKnown RBP33.24■■■□□ 2.91
LCN2-207ENST00000494317 PRR36Q9H6K5 1346 aa33.24■■■□□ 2.91
LCN2-207ENST00000494317 BCL9LQ86UU0 1499 aa33.24■■■□□ 2.91
LCN2-207ENST00000494317 ARHGEF28Q8N1W1 1705 aaKnown RBP33.23■■■□□ 2.91
LCN2-207ENST00000494317 WASLO00401 505 aaPredicted RBP33.23■■■□□ 2.91
LCN2-207ENST00000494317 TULP4Q9NRJ4 1543 aa33.23■■■□□ 2.91
LCN2-207ENST00000494317 LMOD2Q6P5Q4 547 aa33.19■■■□□ 2.9
LCN2-207ENST00000494317 CABLES1Q8TDN4 633 aa33.18■■■□□ 2.9
LCN2-207ENST00000494317 ARHGEF10O15013 1369 aa33.18■■■□□ 2.9
LCN2-207ENST00000494317 KIAA1210Q9ULL0 1709 aa33.17■■■□□ 2.9
LCN2-207ENST00000494317 PLEKHG5O94827 1062 aa33.17■■■□□ 2.9
LCN2-207ENST00000494317 HAP1P54257 671 aaPredicted RBP33.17■■■□□ 2.9
LCN2-207ENST00000494317 SLIT2O94813 1529 aa33.15■■■□□ 2.9
LCN2-207ENST00000494317 GPRASP1Q5JY77 1395 aa33.13■■■□□ 2.89
LCN2-207ENST00000494317 TRPM3Q9HCF6 1732 aaPredicted RBP33.12■■■□□ 2.89
LCN2-207ENST00000494317 NBPF1Q3BBV0 1214 aa33.12■■■□□ 2.89
LCN2-207ENST00000494317 UNC5CLQ8IV45 518 aa33.12■■■□□ 2.89
LCN2-207ENST00000494317 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.11■■■□□ 2.89
LCN2-207ENST00000494317 GJD4Q96KN9 370 aaPredicted RBP33.11■■■□□ 2.89
LCN2-207ENST00000494317 ABCA3Q99758 1704 aa33.11■■■□□ 2.89
LCN2-207ENST00000494317 ATP7BP35670 1465 aa33.1■■■□□ 2.89
LCN2-207ENST00000494317 NGDNQ8NEJ9 315 aaKnown RBP33.09■■■□□ 2.89
LCN2-207ENST00000494317 NUDT16Q96DE0 195 aaKnown RBP33.08■■■□□ 2.89
LCN2-207ENST00000494317 ATAD2Q6PL18 1390 aa33.07■■■□□ 2.88
LCN2-207ENST00000494317 CDK19Q9BWU1 502 aa33.06■■■□□ 2.88
LCN2-207ENST00000494317 ALS2Q96Q42 1657 aa33.06■■■□□ 2.88
LCN2-207ENST00000494317 L3MBTL2Q969R5 705 aa33.04■■■□□ 2.88
LCN2-207ENST00000494317 ITSN1Q15811 1721 aa33.04■■■□□ 2.88
LCN2-207ENST00000494317 RALGAPBQ86X10 1494 aa33.04■■■□□ 2.88
LCN2-207ENST00000494317 SIN3AQ96ST3 1273 aa33.03■■■□□ 2.88
LCN2-207ENST00000494317 GLI3P10071 1580 aa33.02■■■□□ 2.88
LCN2-207ENST00000494317 PLCH1Q4KWH8 1693 aa33.01■■■□□ 2.88
LCN2-207ENST00000494317 PAK3O75914 559 aaPredicted RBP33■■■□□ 2.87
LCN2-207ENST00000494317 FAM83GA6ND36 823 aa32.99■■■□□ 2.87
LCN2-207ENST00000494317 NWD2Q9ULI1 1742 aa32.99■■■□□ 2.87
LCN2-207ENST00000494317 VPS72Q15906 364 aa32.97■■■□□ 2.87
LCN2-207ENST00000494317 CENPJQ9HC77 1338 aaPredicted RBP32.97■■■□□ 2.87
LCN2-207ENST00000494317 CCDC61Q9Y6R9 512 aa32.96■■■□□ 2.87
LCN2-207ENST00000494317 TOPAZ1Q8N9V7 1692 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms