RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 GFRA3O60609 400 aa4.96□□□□□ -1.62
CDC42EP3-205ENST00000494083 Q6ZNB5 142 aa4.96□□□□□ -1.62
CDC42EP3-205ENST00000494083 V9GY48 417 aaPredicted RBP4.96□□□□□ -1.62
CDC42EP3-205ENST00000494083 FMNL1O95466 1100 aaPredicted RBP4.95□□□□□ -1.62
CDC42EP3-205ENST00000494083 PDE4DQ08499 809 aa4.95□□□□□ -1.62
CDC42EP3-205ENST00000494083 SPRYD7Q5W111 196 aa4.95□□□□□ -1.62
CDC42EP3-205ENST00000494083 EIF4G1Q04637 1599 aaKnown RBP4.95□□□□□ -1.62
CDC42EP3-205ENST00000494083 BCANQ96GW7 911 aa4.95□□□□□ -1.62
CDC42EP3-205ENST00000494083 AK7Q96M32 723 aa4.94□□□□□ -1.62
CDC42EP3-205ENST00000494083 PDZRN3Q9UPQ7 1066 aa4.94□□□□□ -1.62
CDC42EP3-205ENST00000494083 NUTM1Q86Y26 1132 aa4.94□□□□□ -1.62
CDC42EP3-205ENST00000494083 ZNF697Q5TEC3 545 aa4.94□□□□□ -1.62
CDC42EP3-205ENST00000494083 USB1Q9BQ65 265 aaKnown RBP4.94□□□□□ -1.62
CDC42EP3-205ENST00000494083 PCDHB15Q9Y5E8 787 aa4.94□□□□□ -1.62
CDC42EP3-205ENST00000494083 FDX1P10109 184 aa4.93□□□□□ -1.62
CDC42EP3-205ENST00000494083 CSPP1Q1MSJ5 1256 aa4.93□□□□□ -1.62
CDC42EP3-205ENST00000494083 TBC1D2Q9BYX2 928 aa4.93□□□□□ -1.62
CDC42EP3-205ENST00000494083 SALL2Q9Y467 1007 aaPredicted RBP4.93□□□□□ -1.62
CDC42EP3-205ENST00000494083 C6orf229H3BNL8 230 aa4.92□□□□□ -1.62
CDC42EP3-205ENST00000494083 FOXC1Q12948 553 aa4.92□□□□□ -1.62
CDC42EP3-205ENST00000494083 GRIPAP1Q4V328 841 aa4.92□□□□□ -1.62
CDC42EP3-205ENST00000494083 QPCTQ16769 361 aa4.92□□□□□ -1.62
CDC42EP3-205ENST00000494083 MSS51Q4VC12 460 aa4.92□□□□□ -1.62
CDC42EP3-205ENST00000494083 LIMD1Q9UGP4 676 aa4.91□□□□□ -1.62
CDC42EP3-205ENST00000494083 DXOO77932 396 aaKnown RBP4.91□□□□□ -1.62
CDC42EP3-205ENST00000494083 MMP16P51512 607 aa4.91□□□□□ -1.62
CDC42EP3-205ENST00000494083 USP46P62068 366 aa4.91□□□□□ -1.62
CDC42EP3-205ENST00000494083 ZNF598Q86UK7 904 aaKnown RBP4.91□□□□□ -1.62
CDC42EP3-205ENST00000494083 CCDC24Q8N4L8 307 aa4.91□□□□□ -1.62
CDC42EP3-205ENST00000494083 GDF9O60383 454 aa4.9□□□□□ -1.62
CDC42EP3-205ENST00000494083 FBXO31Q5XUX0 539 aaPredicted RBP4.9□□□□□ -1.62
CDC42EP3-205ENST00000494083 CABLES1Q8TDN4 633 aa4.9□□□□□ -1.62
CDC42EP3-205ENST00000494083 PKD2L1Q9P0L9 805 aa4.9□□□□□ -1.62
CDC42EP3-205ENST00000494083 TRIM32Q13049 653 aa4.9□□□□□ -1.63
CDC42EP3-205ENST00000494083 PTCRAQ6ISU1 281 aaPredicted RBP4.9□□□□□ -1.63
CDC42EP3-205ENST00000494083 Q3C1V9 767 aa4.89□□□□□ -1.63
CDC42EP3-205ENST00000494083 MYSM1Q5VVJ2 828 aa4.89□□□□□ -1.63
CDC42EP3-205ENST00000494083 RSBN1LQ6PCB5 846 aaPredicted RBP4.89□□□□□ -1.63
CDC42EP3-205ENST00000494083 CFAP99D6REC4 459 aa4.89□□□□□ -1.63
CDC42EP3-205ENST00000494083 RETREG3Q86VR2 466 aa4.89□□□□□ -1.63
CDC42EP3-205ENST00000494083 FAM117AQ9C073 453 aa4.89□□□□□ -1.63
CDC42EP3-205ENST00000494083 MYO15BQ96JP2 1530 aa4.88□□□□□ -1.63
CDC42EP3-205ENST00000494083 NRG2O14511 850 aaPredicted RBP4.88□□□□□ -1.63
CDC42EP3-205ENST00000494083 HRCP23327 699 aa4.88□□□□□ -1.63
CDC42EP3-205ENST00000494083 SKOR1P84550 965 aa4.88□□□□□ -1.63
CDC42EP3-205ENST00000494083 PRR7Q8TB68 274 aa4.88□□□□□ -1.63
CDC42EP3-205ENST00000494083 POLR3EQ9NVU0 708 aa4.88□□□□□ -1.63
CDC42EP3-205ENST00000494083 ST8SIA5O15466 376 aa4.87□□□□□ -1.63
CDC42EP3-205ENST00000494083 PER1O15534 1290 aaPredicted RBP4.87□□□□□ -1.63
CDC42EP3-205ENST00000494083 MTMR2Q13614 643 aa4.87□□□□□ -1.63
CDC42EP3-205ENST00000494083 NUDT12Q9BQG2 462 aa4.87□□□□□ -1.63
CDC42EP3-205ENST00000494083 KDM4CQ9H3R0 1056 aa4.87□□□□□ -1.63
CDC42EP3-205ENST00000494083 FAM187AA6NFU0 413 aa4.87□□□□□ -1.63
CDC42EP3-205ENST00000494083 JUNDP17535 347 aa4.87□□□□□ -1.63
CDC42EP3-205ENST00000494083 TRAF7Q6Q0C0 670 aa4.87□□□□□ -1.63
CDC42EP3-205ENST00000494083 TSC1Q92574 1164 aa4.86□□□□□ -1.63
CDC42EP3-205ENST00000494083 MAP10Q9P2G4 905 aa4.86□□□□□ -1.63
CDC42EP3-205ENST00000494083 PLEKHG3A1L390 1219 aa4.86□□□□□ -1.63
CDC42EP3-205ENST00000494083 POTECB2RU33 542 aa4.86□□□□□ -1.63
CDC42EP3-205ENST00000494083 MRGPRX2Q96LB1 330 aa4.86□□□□□ -1.63
CDC42EP3-205ENST00000494083 LINC01559Q495D7 138 aa4.85□□□□□ -1.63
CDC42EP3-205ENST00000494083 RIC3Q7Z5B4 369 aa4.85□□□□□ -1.63
CDC42EP3-205ENST00000494083 PRR20EP86478 221 aa4.85□□□□□ -1.63
CDC42EP3-205ENST00000494083 PRR20CP86479 221 aa4.85□□□□□ -1.63
CDC42EP3-205ENST00000494083 PRR20DP86480 221 aa4.85□□□□□ -1.63
CDC42EP3-205ENST00000494083 PRR20BP86481 221 aa4.85□□□□□ -1.63
CDC42EP3-205ENST00000494083 PRR20AP86496 221 aa4.85□□□□□ -1.63
CDC42EP3-205ENST00000494083 SPTLC1O15269 473 aa4.85□□□□□ -1.63
CDC42EP3-205ENST00000494083 ZBTB24O43167 697 aaPredicted RBP4.85□□□□□ -1.63
CDC42EP3-205ENST00000494083 DACH1Q9UI36 760 aa4.84□□□□□ -1.63
CDC42EP3-205ENST00000494083 J3QL48 77 aa4.84□□□□□ -1.63
CDC42EP3-205ENST00000494083 PKDCCQ504Y2 493 aa4.84□□□□□ -1.63
CDC42EP3-205ENST00000494083 RTL5Q5HYW3 569 aaPredicted RBP4.84□□□□□ -1.63
CDC42EP3-205ENST00000494083 TOR4AQ9NXH8 423 aa4.84□□□□□ -1.63
CDC42EP3-205ENST00000494083 CCNYL3P0C7X3 344 aa4.84□□□□□ -1.64
CDC42EP3-205ENST00000494083 RPIAP49247 311 aa4.84□□□□□ -1.64
CDC42EP3-205ENST00000494083 MYT1Q01538 1121 aa4.84□□□□□ -1.64
CDC42EP3-205ENST00000494083 LAPTM4AQ15012 233 aa4.84□□□□□ -1.64
CDC42EP3-205ENST00000494083 PROCA1Q8NCQ7 364 aaPredicted RBP4.84□□□□□ -1.64
CDC42EP3-205ENST00000494083 CD2BP2O95400 341 aaKnown RBP4.83□□□□□ -1.64
CDC42EP3-205ENST00000494083 UNC93B1Q9H1C4 597 aa4.83□□□□□ -1.64
CDC42EP3-205ENST00000494083 CLK2P49760 499 aaKnown RBP4.83□□□□□ -1.64
CDC42EP3-205ENST00000494083 TPRNQ4KMQ1 711 aa4.83□□□□□ -1.64
CDC42EP3-205ENST00000494083 ZBTB3Q9H5J0 574 aa4.82□□□□□ -1.64
CDC42EP3-205ENST00000494083 TLL2Q9Y6L7 1015 aa4.82□□□□□ -1.64
CDC42EP3-205ENST00000494083 SH3BP2P78314 561 aa4.82□□□□□ -1.64
CDC42EP3-205ENST00000494083 PTPRNQ16849 979 aa4.82□□□□□ -1.64
CDC42EP3-205ENST00000494083 RC3H1Q5TC82 1133 aaKnown RBP4.82□□□□□ -1.64
CDC42EP3-205ENST00000494083 ABCC9O60706 1549 aa4.81□□□□□ -1.64
CDC42EP3-205ENST00000494083 NUTM2BA6NNL0 878 aaPredicted RBP4.81□□□□□ -1.64
CDC42EP3-205ENST00000494083 NUTM2EB1AL46 878 aaPredicted RBP4.81□□□□□ -1.64
CDC42EP3-205ENST00000494083 NUTM2DQ5VT03 806 aaPredicted RBP4.81□□□□□ -1.64
CDC42EP3-205ENST00000494083 NUTM2AQ8IVF1 878 aaPredicted RBP4.81□□□□□ -1.64
CDC42EP3-205ENST00000494083 EVA1BQ9NVM1 165 aa4.81□□□□□ -1.64
CDC42EP3-205ENST00000494083 WNT7AO00755 349 aa4.81□□□□□ -1.64
CDC42EP3-205ENST00000494083 LILRB3O75022 631 aa4.81□□□□□ -1.64
CDC42EP3-205ENST00000494083 CTHP32929 405 aa4.81□□□□□ -1.64
CDC42EP3-205ENST00000494083 BAP1Q92560 729 aa4.81□□□□□ -1.64
CDC42EP3-205ENST00000494083 PRKCSHP14314 528 aaPredicted RBP4.81□□□□□ -1.64
CDC42EP3-205ENST00000494083 SMPD1P17405 629 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms