RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 NPHP4O75161 1426 aaPredicted RBP15.14■□□□□ 0.01
RFC4-214ENST00000494047 ARHGAP23Q9P227 1491 aa15.14■□□□□ 0.01
RFC4-214ENST00000494047 MYOM1P52179 1685 aa15.13■□□□□ 0.01
RFC4-214ENST00000494047 RGL3Q3MIN7 710 aa15.13■□□□□ 0.01
RFC4-214ENST00000494047 LTBP4Q8N2S1 1624 aa15.13■□□□□ 0.01
RFC4-214ENST00000494047 NINLQ9Y2I6 1382 aa15.12■□□□□ 0.01
RFC4-214ENST00000494047 HDGFP51858 240 aaKnown RBP15.12■□□□□ 0.01
RFC4-214ENST00000494047 TMEM2Q9UHN6 1383 aa15.12■□□□□ 0.01
RFC4-214ENST00000494047 WDR43Q15061 677 aaKnown RBP eCLIP15.11■□□□□ 0.01
RFC4-214ENST00000494047 NBPF1Q3BBV0 1214 aa15.11■□□□□ 0.01
RFC4-214ENST00000494047 PANK3Q9H999 370 aa15.11■□□□□ 0.01
RFC4-214ENST00000494047 NRXN1Q9ULB1 1477 aa15.11■□□□□ 0.01
RFC4-214ENST00000494047 TXNDC2Q86VQ3 553 aa15.11■□□□□ 0.01
RFC4-214ENST00000494047 IPO9Q96P70 1041 aaKnown RBP15.11■□□□□ 0.01
RFC4-214ENST00000494047 ADGRB3O60242 1522 aa15.1■□□□□ 0.01
RFC4-214ENST00000494047 MSH5O43196 834 aa15.1■□□□□ 0.01
RFC4-214ENST00000494047 USP32Q8NFA0 1604 aa15.09■□□□□ 0.01
RFC4-214ENST00000494047 ZNF335Q9H4Z2 1342 aaPredicted RBP15.09■□□□□ 0.01
RFC4-214ENST00000494047 CPS1P31327 1500 aa15.09■□□□□ 0.01
RFC4-214ENST00000494047 LTKP29376 864 aa15.07■□□□□ 0
RFC4-214ENST00000494047 AAMPQ13685 434 aa15.06■□□□□ 0
RFC4-214ENST00000494047 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.06■□□□□ 0
RFC4-214ENST00000494047 DDRGK1Q96HY6 314 aa15.06■□□□□ 0
RFC4-214ENST00000494047 NCBP3Q53F19 620 aaKnown RBP15.05■□□□□ -0
RFC4-214ENST00000494047 PUS7Q96PZ0 661 aaKnown RBP15.05■□□□□ -0
RFC4-214ENST00000494047 TMEM131LA2VDJ0 1609 aa15.05■□□□□ -0
RFC4-214ENST00000494047 RPGRIP1LQ68CZ1 1315 aa15.04■□□□□ -0
RFC4-214ENST00000494047 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
RFC4-214ENST00000494047 PPP2R1AP30153 589 aa15.03■□□□□ -0
RFC4-214ENST00000494047 AMER1Q5JTC6 1135 aaPredicted RBP15.03■□□□□ -0
RFC4-214ENST00000494047 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
RFC4-214ENST00000494047 USP35Q9P2H5 1018 aa15.03■□□□□ -0
RFC4-214ENST00000494047 MYO5BQ9ULV0 1848 aa15.02■□□□□ -0
RFC4-214ENST00000494047 GOLGA2Q08379 1002 aa15.02■□□□□ -0
RFC4-214ENST00000494047 CENPQQ7L2Z9 268 aaPredicted RBP15.02■□□□□ -0
RFC4-214ENST00000494047 CHGAP10645 457 aaKnown RBP15.01□□□□□ -0.01
RFC4-214ENST00000494047 RTL5Q5HYW3 569 aaPredicted RBP15.01□□□□□ -0.01
RFC4-214ENST00000494047 ZFYVE9O95405 1425 aa15.01□□□□□ -0.01
RFC4-214ENST00000494047 RIMS2Q9UQ26 1411 aa15.01□□□□□ -0.01
RFC4-214ENST00000494047 PPLO60437 1756 aa15.01□□□□□ -0.01
RFC4-214ENST00000494047 NSD2O96028 1365 aa15□□□□□ -0.01
RFC4-214ENST00000494047 ZNF521Q96K83 1311 aa15□□□□□ -0.01
RFC4-214ENST00000494047 NKTRP30414 1462 aaKnown RBP15□□□□□ -0.01
RFC4-214ENST00000494047 POLR3AO14802 1390 aaPredicted RBP15□□□□□ -0.01
RFC4-214ENST00000494047 PLEKHG1Q9ULL1 1385 aa15□□□□□ -0.01
RFC4-214ENST00000494047 E9PSI1 815 aa14.98□□□□□ -0.01
RFC4-214ENST00000494047 CNGB1Q14028 1251 aaPredicted RBP14.98□□□□□ -0.01
RFC4-214ENST00000494047 EXOC6Q8TAG9 804 aa14.98□□□□□ -0.01
RFC4-214ENST00000494047 PPM1GO15355 546 aaPredicted RBP14.97□□□□□ -0.01
RFC4-214ENST00000494047 BACH2Q9BYV9 841 aa14.97□□□□□ -0.01
RFC4-214ENST00000494047 TOM1O60784 492 aa14.96□□□□□ -0.02
RFC4-214ENST00000494047 KCNA6P17658 529 aa14.96□□□□□ -0.02
RFC4-214ENST00000494047 TBX22Q9Y458 520 aa14.96□□□□□ -0.02
RFC4-214ENST00000494047 QRICH2Q9H0J4 1663 aa14.95□□□□□ -0.02
RFC4-214ENST00000494047 UBAP1LF5GYI3 381 aa14.95□□□□□ -0.02
RFC4-214ENST00000494047 ADAMTS8Q9UP79 889 aa14.95□□□□□ -0.02
RFC4-214ENST00000494047 STRCP1A6NGW2 1772 aa14.94□□□□□ -0.02
RFC4-214ENST00000494047 PDE4AP27815 886 aa14.94□□□□□ -0.02
RFC4-214ENST00000494047 DUSP27Q5VZP5 1158 aa14.94□□□□□ -0.02
RFC4-214ENST00000494047 SLC26A8Q96RN1 970 aa14.94□□□□□ -0.02
RFC4-214ENST00000494047 DIP2AQ14689 1571 aa14.94□□□□□ -0.02
RFC4-214ENST00000494047 CENPJQ9HC77 1338 aaPredicted RBP14.94□□□□□ -0.02
RFC4-214ENST00000494047 LRRC7Q96NW7 1537 aa14.93□□□□□ -0.02
RFC4-214ENST00000494047 TRMT2AQ8IZ69 625 aaKnown RBP14.93□□□□□ -0.02
RFC4-214ENST00000494047 CGNL1Q0VF96 1302 aa14.93□□□□□ -0.02
RFC4-214ENST00000494047 PIK3R4Q99570 1358 aa14.93□□□□□ -0.02
RFC4-214ENST00000494047 SLFN5Q08AF3 891 aa14.92□□□□□ -0.02
RFC4-214ENST00000494047 VIRMAQ69YN4 1812 aaKnown RBP14.91□□□□□ -0.02
RFC4-214ENST00000494047 PDE3AQ14432 1141 aa14.91□□□□□ -0.02
RFC4-214ENST00000494047 KDM2BQ8NHM5 1336 aa14.91□□□□□ -0.02
RFC4-214ENST00000494047 PLEKHH1Q9ULM0 1364 aa14.9□□□□□ -0.02
RFC4-214ENST00000494047 ADGRB1O14514 1584 aa14.9□□□□□ -0.02
RFC4-214ENST00000494047 NWD1Q149M9 1564 aa14.9□□□□□ -0.02
RFC4-214ENST00000494047 CHD2O14647 1828 aaKnown RBP14.9□□□□□ -0.02
RFC4-214ENST00000494047 VGFO15240 615 aaPredicted RBP14.89□□□□□ -0.03
RFC4-214ENST00000494047 CDCA7LQ96GN5 454 aa14.89□□□□□ -0.03
RFC4-214ENST00000494047 CFAP53Q96M91 514 aa14.88□□□□□ -0.03
RFC4-214ENST00000494047 CRBNQ96SW2 442 aa14.88□□□□□ -0.03
RFC4-214ENST00000494047 ADAMTS13Q76LX8 1427 aa14.88□□□□□ -0.03
RFC4-214ENST00000494047 NCOA3Q9Y6Q9 1424 aa14.88□□□□□ -0.03
RFC4-214ENST00000494047 MAPK8IP3Q9UPT6 1336 aa14.87□□□□□ -0.03
RFC4-214ENST00000494047 CT47B1P0C2W7 299 aaPredicted RBP14.87□□□□□ -0.03
RFC4-214ENST00000494047 CCDC27Q2M243 656 aa14.87□□□□□ -0.03
RFC4-214ENST00000494047 PROSER2Q86WR7 435 aaPredicted RBP14.87□□□□□ -0.03
RFC4-214ENST00000494047 NEXMIFQ5QGS0 1516 aa14.87□□□□□ -0.03
RFC4-214ENST00000494047 NUTM2DQ5VT03 806 aaPredicted RBP14.86□□□□□ -0.03
RFC4-214ENST00000494047 C14orf93Q9H972 538 aaKnown RBP14.86□□□□□ -0.03
RFC4-214ENST00000494047 FAM161AQ3B820 660 aa14.85□□□□□ -0.03
RFC4-214ENST00000494047 DAXXQ9UER7 740 aaPredicted RBP14.85□□□□□ -0.03
RFC4-214ENST00000494047 SALL2Q9Y467 1007 aaPredicted RBP14.85□□□□□ -0.03
RFC4-214ENST00000494047 ARHGEF28Q8N1W1 1705 aaKnown RBP14.85□□□□□ -0.03
RFC4-214ENST00000494047 SHPRHQ149N8 1683 aa14.85□□□□□ -0.03
RFC4-214ENST00000494047 TMEM94Q12767 1356 aa14.85□□□□□ -0.03
RFC4-214ENST00000494047 XIRP1Q702N8 1843 aaKnown RBP14.85□□□□□ -0.03
RFC4-214ENST00000494047 BCL11AQ9H165 835 aa14.85□□□□□ -0.03
RFC4-214ENST00000494047 ANKRD36BQ8N2N9 1353 aa14.84□□□□□ -0.03
RFC4-214ENST00000494047 EVC2Q86UK5 1308 aa14.84□□□□□ -0.03
RFC4-214ENST00000494047 ANKRD26Q9UPS8 1709 aa14.84□□□□□ -0.03
RFC4-214ENST00000494047 WDR63Q8IWG1 891 aa14.84□□□□□ -0.03
RFC4-214ENST00000494047 NSD3Q9BZ95 1437 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms