RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 SMAPO00193 183 aa9.03□□□□□ -0.96
CPSF7-213ENST00000494016 FAM98CQ17RN3 349 aaKnown RBP9.03□□□□□ -0.96
CPSF7-213ENST00000494016 KRI1Q8N9T8 703 aaKnown RBP9.03□□□□□ -0.96
CPSF7-213ENST00000494016 MAP3K1Q13233 1512 aa9.03□□□□□ -0.96
CPSF7-213ENST00000494016 METTL3Q86U44 580 aaKnown RBP9.02□□□□□ -0.97
CPSF7-213ENST00000494016 PXYLP1Q8TE99 480 aa9.02□□□□□ -0.97
CPSF7-213ENST00000494016 CCDC102AQ96A19 550 aa9.02□□□□□ -0.97
CPSF7-213ENST00000494016 PTPN5P54829 565 aa9.01□□□□□ -0.97
CPSF7-213ENST00000494016 EFCAB5A4FU69 1503 aa9□□□□□ -0.97
CPSF7-213ENST00000494016 TIAM1Q13009 1591 aa8.99□□□□□ -0.97
CPSF7-213ENST00000494016 FHOD3Q2V2M9 1422 aa8.99□□□□□ -0.97
CPSF7-213ENST00000494016 RRBP1Q9P2E9 1410 aaKnown RBP8.99□□□□□ -0.97
CPSF7-213ENST00000494016 ZFRQ96KR1 1074 aaKnown RBP8.99□□□□□ -0.97
CPSF7-213ENST00000494016 SLC24A3Q9HC58 644 aa8.99□□□□□ -0.97
CPSF7-213ENST00000494016 RCCD1A6NED2 376 aa8.98□□□□□ -0.97
CPSF7-213ENST00000494016 AK7Q96M32 723 aa8.98□□□□□ -0.97
CPSF7-213ENST00000494016 PHOX2BQ99453 314 aa8.98□□□□□ -0.97
CPSF7-213ENST00000494016 CASKIN1Q8WXD9 1431 aa8.97□□□□□ -0.97
CPSF7-213ENST00000494016 LRRC9Q6ZRR7 1453 aa8.97□□□□□ -0.97
CPSF7-213ENST00000494016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.97□□□□□ -0.97
CPSF7-213ENST00000494016 GOLGA8CPA6NN73 597 aa8.97□□□□□ -0.97
CPSF7-213ENST00000494016 DNAJB2P25686 324 aa8.97□□□□□ -0.97
CPSF7-213ENST00000494016 SAMD9Q5K651 1589 aa8.97□□□□□ -0.97
CPSF7-213ENST00000494016 PCF11O94913 1555 aaKnown RBP8.96□□□□□ -0.97
CPSF7-213ENST00000494016 TMEM134Q9H6X4 195 aa8.96□□□□□ -0.98
CPSF7-213ENST00000494016 PRG4Q92954 1404 aaPredicted RBP8.95□□□□□ -0.98
CPSF7-213ENST00000494016 CFAP43Q8NDM7 1665 aa8.94□□□□□ -0.98
CPSF7-213ENST00000494016 TRIM66O15016 1216 aa8.94□□□□□ -0.98
CPSF7-213ENST00000494016 SAMD7Q7Z3H4 446 aa8.94□□□□□ -0.98
CPSF7-213ENST00000494016 ANKK1Q8NFD2 765 aa8.94□□□□□ -0.98
CPSF7-213ENST00000494016 WNT2BQ93097 391 aa8.94□□□□□ -0.98
CPSF7-213ENST00000494016 ATP1B4Q9UN42 357 aaPredicted RBP8.94□□□□□ -0.98
CPSF7-213ENST00000494016 CCNB3Q8WWL7 1395 aa8.94□□□□□ -0.98
CPSF7-213ENST00000494016 FYCO1Q9BQS8 1478 aa8.94□□□□□ -0.98
CPSF7-213ENST00000494016 AMHR2Q16671 573 aa8.93□□□□□ -0.98
CPSF7-213ENST00000494016 SWT1Q5T5J6 900 aaKnown RBP8.93□□□□□ -0.98
CPSF7-213ENST00000494016 TIMELESSQ9UNS1 1208 aa8.93□□□□□ -0.98
CPSF7-213ENST00000494016 FMN1Q68DA7 1419 aa8.93□□□□□ -0.98
CPSF7-213ENST00000494016 KIF13AQ9H1H9 1805 aa8.92□□□□□ -0.98
CPSF7-213ENST00000494016 LRRIQ1Q96JM4 1722 aa8.92□□□□□ -0.98
CPSF7-213ENST00000494016 ADCY10Q96PN6 1610 aa8.92□□□□□ -0.98
CPSF7-213ENST00000494016 PHLDB1Q86UU1 1377 aa8.92□□□□□ -0.98
CPSF7-213ENST00000494016 HDGFP51858 240 aaKnown RBP8.92□□□□□ -0.98
CPSF7-213ENST00000494016 IFFO2Q5TF58 517 aa8.92□□□□□ -0.98
CPSF7-213ENST00000494016 NLRP7Q8WX94 980 aa8.92□□□□□ -0.98
CPSF7-213ENST00000494016 SOWAHBA6NEL2 793 aa8.91□□□□□ -0.98
CPSF7-213ENST00000494016 THSD4Q6ZMP0 1018 aa8.91□□□□□ -0.98
CPSF7-213ENST00000494016 LRCH3Q96II8 777 aa8.91□□□□□ -0.98
CPSF7-213ENST00000494016 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-213ENST00000494016 KIAA0586Q9BVV6 1533 aa8.9□□□□□ -0.98
CPSF7-213ENST00000494016 A0A0G2JS52 829 aa8.9□□□□□ -0.98
CPSF7-213ENST00000494016 TMUB1Q9BVT8 246 aa8.9□□□□□ -0.98
CPSF7-213ENST00000494016 IQGAP2Q13576 1575 aa8.9□□□□□ -0.99
CPSF7-213ENST00000494016 CLCN1P35523 988 aa8.89□□□□□ -0.99
CPSF7-213ENST00000494016 BCAMP50895 628 aa8.89□□□□□ -0.99
CPSF7-213ENST00000494016 MDM2Q00987 491 aaPredicted RBP8.89□□□□□ -0.99
CPSF7-213ENST00000494016 DHX57Q6P158 1386 aaKnown RBP8.88□□□□□ -0.99
CPSF7-213ENST00000494016 PDE4DQ08499 809 aa8.88□□□□□ -0.99
CPSF7-213ENST00000494016 Q6ZNB5 142 aa8.88□□□□□ -0.99
CPSF7-213ENST00000494016 SLF2Q8IX21 1173 aa8.88□□□□□ -0.99
CPSF7-213ENST00000494016 GPCPD1Q9NPB8 672 aa8.88□□□□□ -0.99
CPSF7-213ENST00000494016 UGGT2Q9NYU1 1516 aa8.88□□□□□ -0.99
CPSF7-213ENST00000494016 ITGAEP38570 1179 aa8.87□□□□□ -0.99
CPSF7-213ENST00000494016 SLC4A3P48751 1232 aa8.87□□□□□ -0.99
CPSF7-213ENST00000494016 REPIN1Q9BWE0 567 aaKnown RBP8.87□□□□□ -0.99
CPSF7-213ENST00000494016 TTLL12Q14166 644 aaPredicted RBP8.86□□□□□ -0.99
CPSF7-213ENST00000494016 PARP9Q8IXQ6 854 aa8.86□□□□□ -0.99
CPSF7-213ENST00000494016 TSR3Q9UJK0 312 aaKnown RBP8.86□□□□□ -0.99
CPSF7-213ENST00000494016 HPS5Q9UPZ3 1129 aa8.86□□□□□ -0.99
CPSF7-213ENST00000494016 DIP2BQ9P265 1576 aa8.86□□□□□ -0.99
CPSF7-213ENST00000494016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.86□□□□□ -0.99
CPSF7-213ENST00000494016 CLSPNQ9HAW4 1339 aa8.85□□□□□ -0.99
CPSF7-213ENST00000494016 MAPKBP1O60336 1514 aa8.85□□□□□ -0.99
CPSF7-213ENST00000494016 DISP1Q96F81 1524 aa8.85□□□□□ -0.99
CPSF7-213ENST00000494016 KIAA0556O60303 1618 aa8.84□□□□□ -0.99
CPSF7-213ENST00000494016 SLC10A3P09131 477 aa8.84□□□□□ -0.99
CPSF7-213ENST00000494016 FAM50AQ14320 339 aaKnown RBP8.84□□□□□ -0.99
CPSF7-213ENST00000494016 SULF1Q8IWU6 871 aa8.84□□□□□ -0.99
CPSF7-213ENST00000494016 NECTIN2Q92692 538 aa8.84□□□□□ -0.99
CPSF7-213ENST00000494016 FAM217BQ9NTX9 383 aaPredicted RBP8.84□□□□□ -0.99
CPSF7-213ENST00000494016 SETD5Q9C0A6 1442 aa8.83□□□□□ -1
CPSF7-213ENST00000494016 DDX11L8A8MPP1 907 aa8.83□□□□□ -1
CPSF7-213ENST00000494016 RNF40O75150 1001 aa8.83□□□□□ -1
CPSF7-213ENST00000494016 PPP4CP60510 307 aa8.83□□□□□ -1
CPSF7-213ENST00000494016 GIGYF2Q6Y7W6 1299 aaKnown RBP8.83□□□□□ -1
CPSF7-213ENST00000494016 HOMEZQ8IX15 550 aa8.83□□□□□ -1
CPSF7-213ENST00000494016 WBP1LQ9NX94 342 aa8.83□□□□□ -1
CPSF7-213ENST00000494016 MAGI3Q5TCQ9 1506 aa8.83□□□□□ -1
CPSF7-213ENST00000494016 RAB3GAP2Q9H2M9 1393 aa8.83□□□□□ -1
CPSF7-213ENST00000494016 RSPH4AQ5TD94 716 aa8.82□□□□□ -1
CPSF7-213ENST00000494016 MTUS2Q5JR59 1369 aa8.82□□□□□ -1
CPSF7-213ENST00000494016 FGD6Q6ZV73 1430 aa8.81□□□□□ -1
CPSF7-213ENST00000494016 CD46P15529 392 aa8.81□□□□□ -1
CPSF7-213ENST00000494016 NYAP1Q6ZVC0 841 aa8.81□□□□□ -1
CPSF7-213ENST00000494016 NCOA2Q15596 1464 aa8.81□□□□□ -1
CPSF7-213ENST00000494016 CCDC18Q5T9S5 1454 aa8.81□□□□□ -1
CPSF7-213ENST00000494016 EPRSP07814 1512 aaKnown RBP8.8□□□□□ -1
CPSF7-213ENST00000494016 SSTR3P32745 418 aaPredicted RBP8.8□□□□□ -1
CPSF7-213ENST00000494016 RDH13Q8NBN7 331 aa8.8□□□□□ -1
CPSF7-213ENST00000494016 ABCC10Q5T3U5 1492 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms