RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 NALCNQ8IZF0 1738 aa15.71■□□□□ 0.11
PDLIM1-205ENST00000493949 ADGRL3Q9HAR2 1447 aa15.71■□□□□ 0.11
PDLIM1-205ENST00000493949 U3KPZ7 1027 aaPredicted RBP15.71■□□□□ 0.11
PDLIM1-205ENST00000493949 SPHKAPQ2M3C7 1700 aa15.71■□□□□ 0.1
PDLIM1-205ENST00000493949 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.71■□□□□ 0.1
PDLIM1-205ENST00000493949 SOS2Q07890 1332 aaPredicted RBP15.7■□□□□ 0.1
PDLIM1-205ENST00000493949 BCL9LQ86UU0 1499 aa15.7■□□□□ 0.1
PDLIM1-205ENST00000493949 BRWD3Q6RI45 1802 aa15.68■□□□□ 0.1
PDLIM1-205ENST00000493949 CENPBP07199 599 aaPredicted RBP15.68■□□□□ 0.1
PDLIM1-205ENST00000493949 ADGRL2O95490 1459 aa15.67■□□□□ 0.1
PDLIM1-205ENST00000493949 C1orf167Q5SNV9 1468 aa15.67■□□□□ 0.1
PDLIM1-205ENST00000493949 E9PCH4 1651 aa15.67■□□□□ 0.1
PDLIM1-205ENST00000493949 MYOM2P54296 1465 aa15.66■□□□□ 0.1
PDLIM1-205ENST00000493949 IQGAP3Q86VI3 1631 aa15.66■□□□□ 0.1
PDLIM1-205ENST00000493949 CAPN15O75808 1086 aa15.66■□□□□ 0.1
PDLIM1-205ENST00000493949 VPS8Q8N3P4 1428 aa15.66■□□□□ 0.1
PDLIM1-205ENST00000493949 GJD4Q96KN9 370 aaPredicted RBP15.65■□□□□ 0.1
PDLIM1-205ENST00000493949 CHIC2Q9UKJ5 165 aa15.65■□□□□ 0.1
PDLIM1-205ENST00000493949 GLI3P10071 1580 aa15.64■□□□□ 0.09
PDLIM1-205ENST00000493949 POTEHQ6S545 545 aa15.64■□□□□ 0.09
PDLIM1-205ENST00000493949 ACIN1Q9UKV3 1341 aaKnown RBP15.64■□□□□ 0.09
PDLIM1-205ENST00000493949 CHGAP10645 457 aaKnown RBP15.63■□□□□ 0.09
PDLIM1-205ENST00000493949 DEFB132Q7Z7B7 95 aa15.63■□□□□ 0.09
PDLIM1-205ENST00000493949 DSG3P32926 999 aa15.62■□□□□ 0.09
PDLIM1-205ENST00000493949 CCER1Q8TC90 406 aaPredicted RBP15.62■□□□□ 0.09
PDLIM1-205ENST00000493949 SPINK5Q9NQ38 1064 aaPredicted RBP15.62■□□□□ 0.09
PDLIM1-205ENST00000493949 METP08581 1390 aa15.62■□□□□ 0.09
PDLIM1-205ENST00000493949 ANKRD50Q9ULJ7 1429 aa15.61■□□□□ 0.09
PDLIM1-205ENST00000493949 RALGAPBQ86X10 1494 aa15.59■□□□□ 0.09
PDLIM1-205ENST00000493949 SF3B2Q13435 895 aaKnown RBP15.57■□□□□ 0.08
PDLIM1-205ENST00000493949 ORAI2Q96SN7 254 aa15.57■□□□□ 0.08
PDLIM1-205ENST00000493949 SLIT2O94813 1529 aa15.57■□□□□ 0.08
PDLIM1-205ENST00000493949 PXDNQ92626 1479 aa15.55■□□□□ 0.08
PDLIM1-205ENST00000493949 PRAG1Q86YV5 1406 aa15.54■□□□□ 0.08
PDLIM1-205ENST00000493949 UNC5CLQ8IV45 518 aa15.54■□□□□ 0.08
PDLIM1-205ENST00000493949 PSDA5PKW4 1024 aaPredicted RBP15.53■□□□□ 0.08
PDLIM1-205ENST00000493949 NPHP3Q7Z494 1330 aa15.52■□□□□ 0.08
PDLIM1-205ENST00000493949 ONECUT3O60422 494 aaPredicted RBP15.52■□□□□ 0.08
PDLIM1-205ENST00000493949 DIEXFQ68CQ4 756 aaKnown RBP15.51■□□□□ 0.07
PDLIM1-205ENST00000493949 NWD2Q9ULI1 1742 aa15.51■□□□□ 0.07
PDLIM1-205ENST00000493949 NEXMIFQ5QGS0 1516 aa15.5■□□□□ 0.07
PDLIM1-205ENST00000493949 RGPD1P0DJD0 1748 aa15.49■□□□□ 0.07
PDLIM1-205ENST00000493949 KCNA4P22459 653 aa15.49■□□□□ 0.07
PDLIM1-205ENST00000493949 BAG6P46379 1132 aa15.49■□□□□ 0.07
PDLIM1-205ENST00000493949 SEPT12Q8IYM1 358 aa15.49■□□□□ 0.07
PDLIM1-205ENST00000493949 USP32Q8NFA0 1604 aa15.49■□□□□ 0.07
PDLIM1-205ENST00000493949 YY1P25490 414 aa15.48■□□□□ 0.07
PDLIM1-205ENST00000493949 CDC42BPGQ6DT37 1551 aa15.48■□□□□ 0.07
PDLIM1-205ENST00000493949 KRT27Q7Z3Y8 459 aa15.47■□□□□ 0.07
PDLIM1-205ENST00000493949 PLCH1Q4KWH8 1693 aa15.47■□□□□ 0.07
PDLIM1-205ENST00000493949 ROBO2Q9HCK4 1378 aa15.47■□□□□ 0.07
PDLIM1-205ENST00000493949 VPS72Q15906 364 aa15.46■□□□□ 0.07
PDLIM1-205ENST00000493949 CLSPNQ9HAW4 1339 aa15.45■□□□□ 0.06
PDLIM1-205ENST00000493949 HFM1A2PYH4 1435 aa15.45■□□□□ 0.06
PDLIM1-205ENST00000493949 DISP2A7MBM2 1401 aa15.43■□□□□ 0.06
PDLIM1-205ENST00000493949 TNS1Q9HBL0 1735 aaKnown RBP15.43■□□□□ 0.06
PDLIM1-205ENST00000493949 LRPPRCP42704 1394 aaKnown RBP15.43■□□□□ 0.06
PDLIM1-205ENST00000493949 KIF1BO60333 1816 aa15.43■□□□□ 0.06
PDLIM1-205ENST00000493949 ZNF316A6NFI3 1004 aaPredicted RBP15.42■□□□□ 0.06
PDLIM1-205ENST00000493949 FOXO3O43524 673 aa15.42■□□□□ 0.06
PDLIM1-205ENST00000493949 ZNF326Q5BKZ1 582 aaKnown RBP15.42■□□□□ 0.06
PDLIM1-205ENST00000493949 ESCO1Q5FWF5 840 aa15.42■□□□□ 0.06
PDLIM1-205ENST00000493949 FAM50AQ14320 339 aaKnown RBP15.41■□□□□ 0.06
PDLIM1-205ENST00000493949 R3HDM1Q15032 1099 aaKnown RBP15.41■□□□□ 0.06
PDLIM1-205ENST00000493949 SPATA31A3Q5VYP0 1347 aa15.41■□□□□ 0.06
PDLIM1-205ENST00000493949 ABCA3Q99758 1704 aa15.4■□□□□ 0.06
PDLIM1-205ENST00000493949 CLTCL1P53675 1640 aa15.39■□□□□ 0.05
PDLIM1-205ENST00000493949 KIF1AQ12756 1690 aa15.39■□□□□ 0.05
PDLIM1-205ENST00000493949 XPCQ01831 940 aaPredicted RBP15.39■□□□□ 0.05
PDLIM1-205ENST00000493949 EN1Q05925 392 aaPredicted RBP15.39■□□□□ 0.05
PDLIM1-205ENST00000493949 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
PDLIM1-205ENST00000493949 NUP155O75694 1391 aa15.38■□□□□ 0.05
PDLIM1-205ENST00000493949 NRAPQ86VF7 1730 aa15.38■□□□□ 0.05
PDLIM1-205ENST00000493949 ROCK1Q13464 1354 aa15.37■□□□□ 0.05
PDLIM1-205ENST00000493949 APLP2Q06481 763 aa15.37■□□□□ 0.05
PDLIM1-205ENST00000493949 CCDC144AA2RUR9 1427 aa15.36■□□□□ 0.05
PDLIM1-205ENST00000493949 FMN2Q9NZ56 1722 aa15.35■□□□□ 0.05
PDLIM1-205ENST00000493949 IFFO2Q5TF58 517 aa15.34■□□□□ 0.05
PDLIM1-205ENST00000493949 RREB1Q92766 1687 aa15.34■□□□□ 0.05
PDLIM1-205ENST00000493949 NAIPQ13075 1403 aa15.34■□□□□ 0.05
PDLIM1-205ENST00000493949 ADGRB2O60241 1585 aa15.33■□□□□ 0.05
PDLIM1-205ENST00000493949 THSD7AQ9UPZ6 1657 aa15.33■□□□□ 0.04
PDLIM1-205ENST00000493949 VGFO15240 615 aaPredicted RBP15.33■□□□□ 0.04
PDLIM1-205ENST00000493949 PPLO60437 1756 aa15.33■□□□□ 0.04
PDLIM1-205ENST00000493949 TNS3Q68CZ2 1445 aa15.33■□□□□ 0.04
PDLIM1-205ENST00000493949 CCDC9Q9Y3X0 531 aaKnown RBP15.32■□□□□ 0.04
PDLIM1-205ENST00000493949 PARD3Q8TEW0 1356 aa15.32■□□□□ 0.04
PDLIM1-205ENST00000493949 EZH2Q15910 746 aaKnown RBP15.31■□□□□ 0.04
PDLIM1-205ENST00000493949 CAMKK2Q96RR4 588 aa15.31■□□□□ 0.04
PDLIM1-205ENST00000493949 TECPR2O15040 1411 aa15.31■□□□□ 0.04
PDLIM1-205ENST00000493949 NUP188Q5SRE5 1749 aa15.31■□□□□ 0.04
PDLIM1-205ENST00000493949 RGPD8O14715 1765 aaPredicted RBP15.31■□□□□ 0.04
PDLIM1-205ENST00000493949 KRT28Q7Z3Y7 464 aa15.3■□□□□ 0.04
PDLIM1-205ENST00000493949 NINLQ9Y2I6 1382 aa15.3■□□□□ 0.04
PDLIM1-205ENST00000493949 GTF3C3Q9Y5Q9 886 aa15.3■□□□□ 0.04
PDLIM1-205ENST00000493949 KNDC1Q76NI1 1749 aa15.29■□□□□ 0.04
PDLIM1-205ENST00000493949 FAM98CQ17RN3 349 aaKnown RBP15.29■□□□□ 0.04
PDLIM1-205ENST00000493949 COL14A1Q05707 1796 aaKnown RBP15.29■□□□□ 0.04
PDLIM1-205ENST00000493949 FAM83GA6ND36 823 aa15.28■□□□□ 0.04
PDLIM1-205ENST00000493949 SBNO1A3KN83 1393 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms