RNA–Protein interactions for RNA: ENST00000493619.1

RTN4IP1-202, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 3

Gene RTN4IP1, Length 208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-202ENST00000493619 XIRP1Q702N8 1843 aaKnown RBP8.7□□□□□ -1.02
RTN4IP1-202ENST00000493619 GALR2O43603 387 aaPredicted RBP8.69□□□□□ -1.02
RTN4IP1-202ENST00000493619 PRKCSHP14314 528 aaPredicted RBP8.69□□□□□ -1.02
RTN4IP1-202ENST00000493619 PROSER2Q86WR7 435 aaPredicted RBP8.69□□□□□ -1.02
RTN4IP1-202ENST00000493619 C19orf44Q9H6X5 657 aa8.69□□□□□ -1.02
RTN4IP1-202ENST00000493619 KIF1BO60333 1816 aa8.68□□□□□ -1.02
RTN4IP1-202ENST00000493619 BCANQ96GW7 911 aa8.68□□□□□ -1.02
RTN4IP1-202ENST00000493619 SPATA31A6Q5VVP1 1343 aa8.68□□□□□ -1.02
RTN4IP1-202ENST00000493619 VGFO15240 615 aaPredicted RBP8.67□□□□□ -1.02
RTN4IP1-202ENST00000493619 AHDC1Q5TGY3 1603 aaPredicted RBP8.67□□□□□ -1.02
RTN4IP1-202ENST00000493619 JCADQ9P266 1359 aa8.67□□□□□ -1.02
RTN4IP1-202ENST00000493619 ROBO1Q9Y6N7 1651 aa8.67□□□□□ -1.02
RTN4IP1-202ENST00000493619 MYO5BQ9ULV0 1848 aa8.66□□□□□ -1.02
RTN4IP1-202ENST00000493619 ATF3P18847 181 aa8.66□□□□□ -1.02
RTN4IP1-202ENST00000493619 SLAIN2Q9P270 581 aa8.66□□□□□ -1.02
RTN4IP1-202ENST00000493619 NAIPQ13075 1403 aa8.65□□□□□ -1.02
RTN4IP1-202ENST00000493619 PTCH1Q13635 1447 aa8.65□□□□□ -1.02
RTN4IP1-202ENST00000493619 ADAMTS13Q76LX8 1427 aa8.65□□□□□ -1.02
RTN4IP1-202ENST00000493619 STAC3Q96MF2 364 aa8.65□□□□□ -1.02
RTN4IP1-202ENST00000493619 PHF12Q96QT6 1004 aa8.65□□□□□ -1.02
RTN4IP1-202ENST00000493619 XRN1Q8IZH2 1706 aaKnown RBP8.65□□□□□ -1.03
RTN4IP1-202ENST00000493619 PHLPP1O60346 1717 aa8.64□□□□□ -1.03
RTN4IP1-202ENST00000493619 PROM2Q8N271 834 aa8.64□□□□□ -1.03
RTN4IP1-202ENST00000493619 SLC26A8Q96RN1 970 aa8.64□□□□□ -1.03
RTN4IP1-202ENST00000493619 SHPRHQ149N8 1683 aa8.64□□□□□ -1.03
RTN4IP1-202ENST00000493619 ANKRD30BQ9BXX2 1392 aa8.63□□□□□ -1.03
RTN4IP1-202ENST00000493619 CHGAP10645 457 aaKnown RBP8.62□□□□□ -1.03
RTN4IP1-202ENST00000493619 C14orf37Q86TY3 774 aa8.62□□□□□ -1.03
RTN4IP1-202ENST00000493619 NEXMIFQ5QGS0 1516 aa8.62□□□□□ -1.03
RTN4IP1-202ENST00000493619 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.62□□□□□ -1.03
RTN4IP1-202ENST00000493619 ADGRL3Q9HAR2 1447 aa8.62□□□□□ -1.03
RTN4IP1-202ENST00000493619 ZNF772Q68DY9 489 aaPredicted RBP8.61□□□□□ -1.03
RTN4IP1-202ENST00000493619 CCDC144AA2RUR9 1427 aa8.61□□□□□ -1.03
RTN4IP1-202ENST00000493619 LAMC1P11047 1609 aa8.61□□□□□ -1.03
RTN4IP1-202ENST00000493619 CDK12Q9NYV4 1490 aaPredicted RBP8.6□□□□□ -1.03
RTN4IP1-202ENST00000493619 ZNF326Q5BKZ1 582 aaKnown RBP8.6□□□□□ -1.03
RTN4IP1-202ENST00000493619 ILDR2Q71H61 639 aa8.6□□□□□ -1.03
RTN4IP1-202ENST00000493619 AMOTL2Q9Y2J4 779 aa8.6□□□□□ -1.03
RTN4IP1-202ENST00000493619 CLTCL1P53675 1640 aa8.6□□□□□ -1.03
RTN4IP1-202ENST00000493619 COL16A1Q07092 1604 aaPredicted RBP8.6□□□□□ -1.03
RTN4IP1-202ENST00000493619 NRXN3Q9Y4C0 1643 aa8.6□□□□□ -1.03
RTN4IP1-202ENST00000493619 SETD5Q9C0A6 1442 aa8.6□□□□□ -1.03
RTN4IP1-202ENST00000493619 LRPPRCP42704 1394 aaKnown RBP8.6□□□□□ -1.03
RTN4IP1-202ENST00000493619 TAOK2Q9UL54 1235 aa8.59□□□□□ -1.03
RTN4IP1-202ENST00000493619 NHSL1Q5SYE7 1610 aa8.58□□□□□ -1.04
RTN4IP1-202ENST00000493619 HRCP23327 699 aa8.58□□□□□ -1.04
RTN4IP1-202ENST00000493619 LRRC59Q96AG4 307 aaKnown RBP8.58□□□□□ -1.04
RTN4IP1-202ENST00000493619 FBXO3Q9UK99 471 aa8.58□□□□□ -1.04
RTN4IP1-202ENST00000493619 ASXL1Q8IXJ9 1541 aa8.58□□□□□ -1.04
RTN4IP1-202ENST00000493619 PPLO60437 1756 aa8.58□□□□□ -1.04
RTN4IP1-202ENST00000493619 CDC42BPGQ6DT37 1551 aa8.57□□□□□ -1.04
RTN4IP1-202ENST00000493619 TECPR2O15040 1411 aa8.57□□□□□ -1.04
RTN4IP1-202ENST00000493619 SIRT1Q96EB6 747 aa8.57□□□□□ -1.04
RTN4IP1-202ENST00000493619 SETD1AO15047 1707 aaKnown RBP8.57□□□□□ -1.04
RTN4IP1-202ENST00000493619 KNDC1Q76NI1 1749 aa8.57□□□□□ -1.04
RTN4IP1-202ENST00000493619 MST1RQ04912 1400 aa8.56□□□□□ -1.04
RTN4IP1-202ENST00000493619 ITGAEP38570 1179 aa8.56□□□□□ -1.04
RTN4IP1-202ENST00000493619 EIF3AQ14152 1382 aaKnown RBP8.56□□□□□ -1.04
RTN4IP1-202ENST00000493619 TRIM52Q96A61 297 aa8.55□□□□□ -1.04
RTN4IP1-202ENST00000493619 MYOM2P54296 1465 aa8.55□□□□□ -1.04
RTN4IP1-202ENST00000493619 ABCC11Q96J66 1382 aa8.54□□□□□ -1.04
RTN4IP1-202ENST00000493619 POTEB2H3BUK9 544 aa8.54□□□□□ -1.04
RTN4IP1-202ENST00000493619 PELP1Q8IZL8 1130 aaKnown RBP8.54□□□□□ -1.04
RTN4IP1-202ENST00000493619 OTUD5Q96G74 571 aa8.54□□□□□ -1.04
RTN4IP1-202ENST00000493619 IFT172Q9UG01 1749 aa8.54□□□□□ -1.04
RTN4IP1-202ENST00000493619 PTPRUQ92729 1446 aa8.54□□□□□ -1.04
RTN4IP1-202ENST00000493619 NPHP3Q7Z494 1330 aa8.54□□□□□ -1.04
RTN4IP1-202ENST00000493619 KIF1AQ12756 1690 aa8.53□□□□□ -1.04
RTN4IP1-202ENST00000493619 MEX3CQ5U5Q3 659 aaKnown RBP8.53□□□□□ -1.04
RTN4IP1-202ENST00000493619 ASTLQ6HA08 431 aaPredicted RBP8.53□□□□□ -1.04
RTN4IP1-202ENST00000493619 BRINP3Q76B58 766 aa8.53□□□□□ -1.04
RTN4IP1-202ENST00000493619 MS4A3Q96HJ5 214 aa8.53□□□□□ -1.04
RTN4IP1-202ENST00000493619 NALCNQ8IZF0 1738 aa8.53□□□□□ -1.04
RTN4IP1-202ENST00000493619 METP08581 1390 aa8.52□□□□□ -1.05
RTN4IP1-202ENST00000493619 COL22A1Q8NFW1 1626 aaPredicted RBP8.52□□□□□ -1.05
RTN4IP1-202ENST00000493619 NGLY1Q96IV0 654 aa8.52□□□□□ -1.05
RTN4IP1-202ENST00000493619 PIK3C2GO75747 1445 aa8.52□□□□□ -1.05
RTN4IP1-202ENST00000493619 SPATA31E1Q6ZUB1 1445 aa8.52□□□□□ -1.05
RTN4IP1-202ENST00000493619 C1orf167Q5SNV9 1468 aa8.51□□□□□ -1.05
RTN4IP1-202ENST00000493619 VSIG10Q8N0Z9 540 aa8.51□□□□□ -1.05
RTN4IP1-202ENST00000493619 TSPYL2Q9H2G4 693 aaPredicted RBP8.51□□□□□ -1.05
RTN4IP1-202ENST00000493619 CCDC61Q9Y6R9 512 aa8.51□□□□□ -1.05
RTN4IP1-202ENST00000493619 DHX57Q6P158 1386 aaKnown RBP8.5□□□□□ -1.05
RTN4IP1-202ENST00000493619 DLC1Q96QB1 1528 aa8.5□□□□□ -1.05
RTN4IP1-202ENST00000493619 ATMINO43313 823 aaPredicted RBP8.5□□□□□ -1.05
RTN4IP1-202ENST00000493619 TPRNQ4KMQ1 711 aa8.5□□□□□ -1.05
RTN4IP1-202ENST00000493619 MPHOSPH9Q99550 1183 aa8.5□□□□□ -1.05
RTN4IP1-202ENST00000493619 NRXN1Q9ULB1 1477 aa8.5□□□□□ -1.05
RTN4IP1-202ENST00000493619 SOS2Q07890 1332 aaPredicted RBP8.5□□□□□ -1.05
RTN4IP1-202ENST00000493619 ANKARQ7Z5J8 1434 aa8.48□□□□□ -1.05
RTN4IP1-202ENST00000493619 PLEKHG5O94827 1062 aa8.48□□□□□ -1.05
RTN4IP1-202ENST00000493619 C7P10643 843 aa8.48□□□□□ -1.05
RTN4IP1-202ENST00000493619 RXRBP28702 533 aa8.48□□□□□ -1.05
RTN4IP1-202ENST00000493619 SLC39A7Q92504 469 aa8.48□□□□□ -1.05
RTN4IP1-202ENST00000493619 ADGRB2O60241 1585 aa8.48□□□□□ -1.05
RTN4IP1-202ENST00000493619 PNPLA6Q8IY17 1366 aa8.48□□□□□ -1.05
RTN4IP1-202ENST00000493619 VASPP50552 380 aaPredicted RBP8.47□□□□□ -1.05
RTN4IP1-202ENST00000493619 RBM6P78332 1123 aaKnown RBP8.47□□□□□ -1.05
RTN4IP1-202ENST00000493619 MIER1Q8N108 512 aa8.47□□□□□ -1.05
RTN4IP1-202ENST00000493619 RGS17Q9UGC6 210 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms