RNA–Protein interactions for RNA: ENST00000493441.5

SMYD3-217, Transcript of SET and MYND domain containing 3, humanhuman

TSL 2

Gene SMYD3, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-217ENST00000493441 ZNF454Q8N9F8 522 aa11.47□□□□□ -0.57
SMYD3-217ENST00000493441 ZMIZ1Q9ULJ6 1067 aa11.47□□□□□ -0.57
SMYD3-217ENST00000493441 TMEM164Q5U3C3 297 aa11.46□□□□□ -0.57
SMYD3-217ENST00000493441 LRRN4Q8WUT4 740 aa11.46□□□□□ -0.57
SMYD3-217ENST00000493441 MRRFQ96E11 262 aaKnown RBP11.46□□□□□ -0.57
SMYD3-217ENST00000493441 PCDHGC3Q9UN70 934 aa11.46□□□□□ -0.57
SMYD3-217ENST00000493441 CDK11BP21127 795 aaKnown RBP11.45□□□□□ -0.58
SMYD3-217ENST00000493441 PHLDB3Q6NSJ2 640 aa11.45□□□□□ -0.58
SMYD3-217ENST00000493441 C3orf67Q6ZVT6 689 aa11.45□□□□□ -0.58
SMYD3-217ENST00000493441 CDK11AQ9UQ88 783 aaPredicted RBP11.45□□□□□ -0.58
SMYD3-217ENST00000493441 COLQQ9Y215 455 aaPredicted RBP11.44□□□□□ -0.58
SMYD3-217ENST00000493441 GCGRP47871 477 aa11.43□□□□□ -0.58
SMYD3-217ENST00000493441 MTMR2Q13614 643 aa11.43□□□□□ -0.58
SMYD3-217ENST00000493441 EPS8L1Q8TE68 723 aa11.43□□□□□ -0.58
SMYD3-217ENST00000493441 SIRT1Q96EB6 747 aa11.43□□□□□ -0.58
SMYD3-217ENST00000493441 NBPF26B4DH59 902 aa11.42□□□□□ -0.58
SMYD3-217ENST00000493441 NUDT18Q6ZVK8 323 aa11.42□□□□□ -0.58
SMYD3-217ENST00000493441 RDH13Q8NBN7 331 aa11.42□□□□□ -0.58
SMYD3-217ENST00000493441 STK32AQ8WU08 396 aa11.42□□□□□ -0.58
SMYD3-217ENST00000493441 TSKSQ9UJT2 592 aa11.42□□□□□ -0.58
SMYD3-217ENST00000493441 SEC24BO95487 1268 aa11.41□□□□□ -0.58
SMYD3-217ENST00000493441 ZNF16P17020 682 aaPredicted RBP11.41□□□□□ -0.58
SMYD3-217ENST00000493441 ARID4AP29374 1257 aaPredicted RBP11.41□□□□□ -0.58
SMYD3-217ENST00000493441 EIF4G2P78344 907 aaKnown RBP eCLIP11.4□□□□□ -0.581e-7■■■■■ 35.3
SMYD3-217ENST00000493441 SLF2Q8IX21 1173 aa11.4□□□□□ -0.58
SMYD3-217ENST00000493441 NFATC2IPQ8NCF5 419 aa11.4□□□□□ -0.58
SMYD3-217ENST00000493441 PNMA1Q8ND90 353 aa11.4□□□□□ -0.58
SMYD3-217ENST00000493441 CFAP99D6REC4 459 aa11.39□□□□□ -0.59
SMYD3-217ENST00000493441 C3orf80F5H4A9 247 aa11.39□□□□□ -0.59
SMYD3-217ENST00000493441 SSFA2P28290 1259 aa11.39□□□□□ -0.59
SMYD3-217ENST00000493441 NOM1Q5C9Z4 860 aaKnown RBP11.39□□□□□ -0.59
SMYD3-217ENST00000493441 NOVA2Q9UNW9 492 aaKnown RBP11.39□□□□□ -0.59
SMYD3-217ENST00000493441 SOWAHDA6NJG2 315 aa11.37□□□□□ -0.59
SMYD3-217ENST00000493441 COL9A1P20849 921 aa11.37□□□□□ -0.59
SMYD3-217ENST00000493441 GUCA2AQ02747 115 aa11.37□□□□□ -0.59
SMYD3-217ENST00000493441 TATDN2Q93075 761 aa11.37□□□□□ -0.59
SMYD3-217ENST00000493441 PLEKHM2Q8IWE5 1019 aa11.36□□□□□ -0.59
SMYD3-217ENST00000493441 PNMA3Q9UL41 463 aa11.36□□□□□ -0.59
SMYD3-217ENST00000493441 FAM196BA6NMK8 535 aa11.35□□□□□ -0.59
SMYD3-217ENST00000493441 PPP1R3GB7ZBB8 358 aa11.35□□□□□ -0.59
SMYD3-217ENST00000493441 TCF3P15923 654 aa11.35□□□□□ -0.59
SMYD3-217ENST00000493441 FAM177A1Q8N128 213 aaPredicted RBP11.35□□□□□ -0.59
SMYD3-217ENST00000493441 BCL2L13Q9BXK5 485 aa11.35□□□□□ -0.59
SMYD3-217ENST00000493441 TSC1Q92574 1164 aa11.34□□□□□ -0.59
SMYD3-217ENST00000493441 HLA-CQ95604 372 aa11.34□□□□□ -0.59
SMYD3-217ENST00000493441 C8orf37Q96NL8 207 aa11.34□□□□□ -0.59
SMYD3-217ENST00000493441 USP17L3A6NCW0 530 aa11.33□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L4A6NCW7 530 aa11.33□□□□□ -0.6
SMYD3-217ENST00000493441 VAMP1P23763 118 aa11.33□□□□□ -0.6
SMYD3-217ENST00000493441 NR1H3Q13133 447 aa11.33□□□□□ -0.6
SMYD3-217ENST00000493441 NR6A1Q15406 480 aa11.33□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L2Q6R6M4 530 aa11.33□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L1Q7RTZ2 530 aa11.33□□□□□ -0.6
SMYD3-217ENST00000493441 CCDC125Q86Z20 511 aa11.33□□□□□ -0.6
SMYD3-217ENST00000493441 CLP1Q92989 425 aaKnown RBP11.33□□□□□ -0.6
SMYD3-217ENST00000493441 SLAIN2Q9P270 581 aa11.33□□□□□ -0.6
SMYD3-217ENST00000493441 POTEFA5A3E0 1075 aa11.32□□□□□ -0.6
SMYD3-217ENST00000493441 TRIM6-TRIM34B2RNG4 842 aa11.32□□□□□ -0.6
SMYD3-217ENST00000493441 BCL2L12Q9HB09 334 aa11.31□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L15C9J2P7 530 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L10C9JJH3 530 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L13C9JLJ4 530 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L12C9JPN9 530 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L11C9JVI0 530 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L21D6R901 530 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L18D6R9N7 530 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L22D6RA61 530 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L17D6RBQ6 530 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L19D6RCP7 530 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L20D6RJB6 530 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 PIK3CDO00329 1044 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 MARSP56192 900 aaKnown RBP11.3□□□□□ -0.6
SMYD3-217ENST00000493441 FAM69CQ0P6D2 419 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L24Q0WX57 530 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 PACS2Q86VP3 889 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 NPAS4Q8IUM7 802 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 GIPC2Q8TF65 315 aa11.3□□□□□ -0.6
SMYD3-217ENST00000493441 USP17L5A8MUK1 530 aa11.29□□□□□ -0.6
SMYD3-217ENST00000493441 C6orf229H3BNL8 230 aa11.28□□□□□ -0.6
SMYD3-217ENST00000493441 SLC10A3P09131 477 aa11.28□□□□□ -0.6
SMYD3-217ENST00000493441 NUDT7P0C024 238 aa11.28□□□□□ -0.6
SMYD3-217ENST00000493441 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
SMYD3-217ENST00000493441 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
SMYD3-217ENST00000493441 SERPINB4P48594 390 aa11.27□□□□□ -0.61
SMYD3-217ENST00000493441 CRTC2Q53ET0 693 aaPredicted RBP11.27□□□□□ -0.61
SMYD3-217ENST00000493441 PTK7Q13308 1070 aa11.26□□□□□ -0.61
SMYD3-217ENST00000493441 SREK1Q8WXA9 508 aaKnown RBP11.26□□□□□ -0.61
SMYD3-217ENST00000493441 DRC1Q96MC2 740 aa11.26□□□□□ -0.61
SMYD3-217ENST00000493441 PER1O15534 1290 aaPredicted RBP11.25□□□□□ -0.61
SMYD3-217ENST00000493441 FBXO45P0C2W1 286 aa11.25□□□□□ -0.61
SMYD3-217ENST00000493441 SKIP12755 728 aa11.25□□□□□ -0.61
SMYD3-217ENST00000493441 GRIPAP1Q4V328 841 aa11.25□□□□□ -0.61
SMYD3-217ENST00000493441 C1orf216Q8TAB5 229 aa11.25□□□□□ -0.61
SMYD3-217ENST00000493441 CANXP27824 592 aaKnown RBP11.24□□□□□ -0.61
SMYD3-217ENST00000493441 PPP4R3BQ5MIZ7 849 aa11.24□□□□□ -0.61
SMYD3-217ENST00000493441 CDCA7Q9BWT1 371 aaPredicted RBP11.24□□□□□ -0.61
SMYD3-217ENST00000493441 ANKRD33BA6NCL7 494 aa11.23□□□□□ -0.61
SMYD3-217ENST00000493441 ZBBXA8MT70 800 aa11.23□□□□□ -0.61
SMYD3-217ENST00000493441 PTPREP23469 700 aa11.23□□□□□ -0.61
SMYD3-217ENST00000493441 ATP2B4P23634 1241 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms