RNA–Protein interactions for RNA: ENST00000493378.1

ARF4-207, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-207ENST00000493378 C14orf37Q86TY3 774 aa15.39■□□□□ 0.05
ARF4-207ENST00000493378 RBM33Q96EV2 1170 aaKnown RBP15.39■□□□□ 0.05
ARF4-207ENST00000493378 PRAM1Q96QH2 718 aa15.38■□□□□ 0.05
ARF4-207ENST00000493378 TRAK1Q9UPV9 953 aa15.38■□□□□ 0.05
ARF4-207ENST00000493378 EIF3AQ14152 1382 aaKnown RBP15.37■□□□□ 0.05
ARF4-207ENST00000493378 ATF3P18847 181 aa15.37■□□□□ 0.05
ARF4-207ENST00000493378 WAPLQ7Z5K2 1190 aa15.37■□□□□ 0.05
ARF4-207ENST00000493378 POGKQ9P215 609 aa15.36■□□□□ 0.05
ARF4-207ENST00000493378 MST1RQ04912 1400 aa15.35■□□□□ 0.05
ARF4-207ENST00000493378 CARD11Q9BXL7 1154 aa15.34■□□□□ 0.05
ARF4-207ENST00000493378 SLAIN2Q9P270 581 aa15.33■□□□□ 0.04
ARF4-207ENST00000493378 CENPJQ9HC77 1338 aaPredicted RBP15.33■□□□□ 0.04
ARF4-207ENST00000493378 SBNO2Q9Y2G9 1366 aa15.33■□□□□ 0.04
ARF4-207ENST00000493378 ANKARQ7Z5J8 1434 aa15.32■□□□□ 0.04
ARF4-207ENST00000493378 C1orf167Q5SNV9 1468 aa15.32■□□□□ 0.04
ARF4-207ENST00000493378 FMN2Q9NZ56 1722 aa15.31■□□□□ 0.04
ARF4-207ENST00000493378 QRICH2Q9H0J4 1663 aa15.29■□□□□ 0.04
ARF4-207ENST00000493378 ROBO1Q9Y6N7 1651 aa15.29■□□□□ 0.04
ARF4-207ENST00000493378 TULP4Q9NRJ4 1543 aa15.29■□□□□ 0.04
ARF4-207ENST00000493378 WASLO00401 505 aaPredicted RBP15.28■□□□□ 0.04
ARF4-207ENST00000493378 SAFB2Q14151 953 aaKnown RBP eCLIP15.28■□□□□ 0.04
ARF4-207ENST00000493378 MINK1Q8N4C8 1332 aaPredicted RBP15.27■□□□□ 0.04
ARF4-207ENST00000493378 SLC24A1O60721 1099 aa15.27■□□□□ 0.04
ARF4-207ENST00000493378 PIP4K2BP78356 416 aa15.27■□□□□ 0.04
ARF4-207ENST00000493378 AHDC1Q5TGY3 1603 aaPredicted RBP15.27■□□□□ 0.03
ARF4-207ENST00000493378 USP47Q96K76 1375 aa15.26■□□□□ 0.03
ARF4-207ENST00000493378 BRINP3Q76B58 766 aa15.26■□□□□ 0.03
ARF4-207ENST00000493378 ILDR1Q86SU0 546 aaPredicted RBP15.25■□□□□ 0.03
ARF4-207ENST00000493378 KIF1AQ12756 1690 aa15.25■□□□□ 0.03
ARF4-207ENST00000493378 SCAF1Q9H7N4 1312 aaKnown RBP15.24■□□□□ 0.03
ARF4-207ENST00000493378 ATP7BP35670 1465 aa15.24■□□□□ 0.03
ARF4-207ENST00000493378 NHSL1Q5SYE7 1610 aa15.24■□□□□ 0.03
ARF4-207ENST00000493378 USP32Q8NFA0 1604 aa15.24■□□□□ 0.03
ARF4-207ENST00000493378 HIRIP3Q9BW71 556 aaPredicted RBP15.23■□□□□ 0.03
ARF4-207ENST00000493378 EVC2Q86UK5 1308 aa15.22■□□□□ 0.03
ARF4-207ENST00000493378 PUS7Q96PZ0 661 aaKnown RBP15.21■□□□□ 0.03
ARF4-207ENST00000493378 TESK2Q96S53 571 aa15.21■□□□□ 0.03
ARF4-207ENST00000493378 CDK19Q9BWU1 502 aa15.21■□□□□ 0.03
ARF4-207ENST00000493378 TOPAZ1Q8N9V7 1692 aa15.21■□□□□ 0.03
ARF4-207ENST00000493378 ITSN1Q15811 1721 aa15.2■□□□□ 0.02
ARF4-207ENST00000493378 PRR36Q9H6K5 1346 aa15.2■□□□□ 0.02
ARF4-207ENST00000493378 ST20-MTHFSA0A0A6YYL1 179 aa15.2■□□□□ 0.02
ARF4-207ENST00000493378 ESCO1Q5FWF5 840 aa15.2■□□□□ 0.02
ARF4-207ENST00000493378 ORAI2Q96SN7 254 aa15.2■□□□□ 0.02
ARF4-207ENST00000493378 NPHP3Q7Z494 1330 aa15.19■□□□□ 0.02
ARF4-207ENST00000493378 COL16A1Q07092 1604 aaPredicted RBP15.19■□□□□ 0.02
ARF4-207ENST00000493378 HSPA1LP34931 641 aa15.19■□□□□ 0.02
ARF4-207ENST00000493378 ATAD2Q6PL18 1390 aa15.19■□□□□ 0.02
ARF4-207ENST00000493378 PHLPP1O60346 1717 aa15.18■□□□□ 0.02
ARF4-207ENST00000493378 NUDT16Q96DE0 195 aaKnown RBP15.18■□□□□ 0.02
ARF4-207ENST00000493378 PHF8Q9UPP1 1060 aa15.18■□□□□ 0.02
ARF4-207ENST00000493378 CCDC61Q9Y6R9 512 aa15.18■□□□□ 0.02
ARF4-207ENST00000493378 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
ARF4-207ENST00000493378 PXDNQ92626 1479 aa15.17■□□□□ 0.02
ARF4-207ENST00000493378 EIF4G2P78344 907 aaKnown RBP eCLIP15.17■□□□□ 0.02
ARF4-207ENST00000493378 POLR3AO14802 1390 aaPredicted RBP15.16■□□□□ 0.02
ARF4-207ENST00000493378 PLEKHG3A1L390 1219 aa15.16■□□□□ 0.02
ARF4-207ENST00000493378 NUTM2FA1L443 756 aa15.16■□□□□ 0.02
ARF4-207ENST00000493378 SRPK2P78362 688 aaKnown RBP15.16■□□□□ 0.02
ARF4-207ENST00000493378 CABP2Q9NPB3 220 aa15.15■□□□□ 0.02
ARF4-207ENST00000493378 RGPD8O14715 1765 aaPredicted RBP15.15■□□□□ 0.02
ARF4-207ENST00000493378 NINLQ9Y2I6 1382 aa15.14■□□□□ 0.01
ARF4-207ENST00000493378 TMF1P82094 1093 aa15.14■□□□□ 0.01
ARF4-207ENST00000493378 PPIP5K1Q6PFW1 1433 aa15.14■□□□□ 0.01
ARF4-207ENST00000493378 BRD4O60885 1362 aaPredicted RBP15.13■□□□□ 0.01
ARF4-207ENST00000493378 JCADQ9P266 1359 aa15.13■□□□□ 0.01
ARF4-207ENST00000493378 ZEB1P37275 1124 aaPredicted RBP15.13■□□□□ 0.01
ARF4-207ENST00000493378 CDCA8Q53HL2 280 aa15.13■□□□□ 0.01
ARF4-207ENST00000493378 SBNO1A3KN83 1393 aa15.12■□□□□ 0.01
ARF4-207ENST00000493378 FOXO3O43524 673 aa15.12■□□□□ 0.01
ARF4-207ENST00000493378 LRRC59Q96AG4 307 aaKnown RBP15.12■□□□□ 0.01
ARF4-207ENST00000493378 SHPRHQ149N8 1683 aa15.12■□□□□ 0.01
ARF4-207ENST00000493378 DISP3Q9P2K9 1392 aa15.11■□□□□ 0.01
ARF4-207ENST00000493378 HSPA5P11021 654 aaKnown RBP15.11■□□□□ 0.01
ARF4-207ENST00000493378 PSME1Q06323 249 aa15.1■□□□□ 0.01
ARF4-207ENST00000493378 PMFBP1Q8TBY8 1022 aa15.1■□□□□ 0.01
ARF4-207ENST00000493378 DDX17Q92841 729 aaKnown RBP15.1■□□□□ 0.01
ARF4-207ENST00000493378 NGDNQ8NEJ9 315 aaKnown RBP15.09■□□□□ 0.01
ARF4-207ENST00000493378 ACEP12821 1306 aa15.09■□□□□ 0.01
ARF4-207ENST00000493378 COL22A1Q8NFW1 1626 aaPredicted RBP15.09■□□□□ 0.01
ARF4-207ENST00000493378 TRPM3Q9HCF6 1732 aaPredicted RBP15.09■□□□□ 0.01
ARF4-207ENST00000493378 CPSF1Q10570 1443 aaKnown RBP15.09■□□□□ 0.01
ARF4-207ENST00000493378 TNS3Q68CZ2 1445 aa15.09■□□□□ 0.01
ARF4-207ENST00000493378 KRT28Q7Z3Y7 464 aa15.08■□□□□ 0
ARF4-207ENST00000493378 CABP1Q9NZU7 370 aa15.08■□□□□ 0
ARF4-207ENST00000493378 SPATA31A6Q5VVP1 1343 aa15.08■□□□□ 0
ARF4-207ENST00000493378 SPATA31A3Q5VYP0 1347 aa15.08■□□□□ 0
ARF4-207ENST00000493378 PNPLA6Q8IY17 1366 aa15.08■□□□□ 0
ARF4-207ENST00000493378 ZNF692Q9BU19 519 aaPredicted RBP15.07■□□□□ 0
ARF4-207ENST00000493378 ARHGEF10O15013 1369 aa15.07■□□□□ 0
ARF4-207ENST00000493378 USP6P35125 1406 aa15.07■□□□□ 0
ARF4-207ENST00000493378 SSH2Q76I76 1423 aa15.06■□□□□ 0
ARF4-207ENST00000493378 CD163L1Q9NR16 1453 aa15.06■□□□□ 0
ARF4-207ENST00000493378 ALS2Q96Q42 1657 aa15.05■□□□□ -0
ARF4-207ENST00000493378 AKAP12Q02952 1782 aa15.05■□□□□ -0
ARF4-207ENST00000493378 MED1Q15648 1581 aaPredicted RBP15.04■□□□□ -0
ARF4-207ENST00000493378 MON2Q7Z3U7 1717 aa15.03■□□□□ -0
ARF4-207ENST00000493378 NRKQ7Z2Y5 1582 aa15.03■□□□□ -0
ARF4-207ENST00000493378 ANKRD36BQ8N2N9 1353 aa15.03■□□□□ -0
ARF4-207ENST00000493378 XPCQ01831 940 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms