RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 RSPH4AQ5TD94 716 aa10.91□□□□□ -0.66
SYCP1-208ENST00000493377 PRDM9Q9NQV7 894 aa10.89□□□□□ -0.67
SYCP1-208ENST00000493377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.88□□□□□ -0.67
SYCP1-208ENST00000493377 MORN1Q5T089 497 aa10.88□□□□□ -0.67
SYCP1-208ENST00000493377 GPAT2Q6NUI2 795 aa10.88□□□□□ -0.67
SYCP1-208ENST00000493377 SALL2Q9Y467 1007 aaPredicted RBP10.88□□□□□ -0.67
SYCP1-208ENST00000493377 DNMT3AQ9Y6K1 912 aaPredicted RBP10.88□□□□□ -0.67
SYCP1-208ENST00000493377 E2F4Q16254 413 aa10.86□□□□□ -0.67
SYCP1-208ENST00000493377 MSS51Q4VC12 460 aa10.86□□□□□ -0.67
SYCP1-208ENST00000493377 CAPN5O15484 640 aaPredicted RBP10.85□□□□□ -0.67
SYCP1-208ENST00000493377 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.84□□□□□ -0.67
SYCP1-208ENST00000493377 FOXK2Q01167 660 aa10.84□□□□□ -0.67
SYCP1-208ENST00000493377 ALDH1A1P00352 501 aa10.82□□□□□ -0.68
SYCP1-208ENST00000493377 RC3H1Q5TC82 1133 aaKnown RBP10.82□□□□□ -0.68
SYCP1-208ENST00000493377 KRTAP9-2Q9BYQ4 174 aa10.82□□□□□ -0.68
SYCP1-208ENST00000493377 WNT7BP56706 349 aa10.8□□□□□ -0.68
SYCP1-208ENST00000493377 PTGDRQ13258 359 aa10.8□□□□□ -0.68
SYCP1-208ENST00000493377 PSMG3-AS1Q96PY0 264 aa10.8□□□□□ -0.68
SYCP1-208ENST00000493377 ADAMTS8Q9UP79 889 aa10.8□□□□□ -0.68
SYCP1-208ENST00000493377 ATP6V1AP38606 617 aa10.79□□□□□ -0.68
SYCP1-208ENST00000493377 BRICD5Q6PL45 260 aa10.79□□□□□ -0.68
SYCP1-208ENST00000493377 ZFP42Q96MM3 310 aa10.79□□□□□ -0.68
SYCP1-208ENST00000493377 SLC27A5Q9Y2P5 690 aa10.79□□□□□ -0.68
SYCP1-208ENST00000493377 FECHP22830 423 aa10.77□□□□□ -0.69
SYCP1-208ENST00000493377 KRTAP9-6A0A140TA67 174 aa10.76□□□□□ -0.69
SYCP1-208ENST00000493377 FUT2Q10981 343 aa10.76□□□□□ -0.69
SYCP1-208ENST00000493377 MMP16P51512 607 aa10.74□□□□□ -0.69
SYCP1-208ENST00000493377 FAM161AQ3B820 660 aa10.74□□□□□ -0.69
SYCP1-208ENST00000493377 ADAM23O75077 832 aa10.73□□□□□ -0.69
SYCP1-208ENST00000493377 SKOR1P84550 965 aa10.73□□□□□ -0.69
SYCP1-208ENST00000493377 WASF2Q9Y6W5 498 aa10.72□□□□□ -0.69
SYCP1-208ENST00000493377 KANK3Q6NY19 840 aa10.71□□□□□ -0.69
SYCP1-208ENST00000493377 KRTAP1-3Q8IUG1 177 aa10.69□□□□□ -0.7
SYCP1-208ENST00000493377 PXYLP1Q8TE99 480 aa10.69□□□□□ -0.7
SYCP1-208ENST00000493377 OATP04181 439 aa10.68□□□□□ -0.7
SYCP1-208ENST00000493377 IRS1P35568 1242 aa10.68□□□□□ -0.7
SYCP1-208ENST00000493377 RNF19BQ6ZMZ0 732 aa10.68□□□□□ -0.7
SYCP1-208ENST00000493377 SIAH2O43255 324 aa10.67□□□□□ -0.7
SYCP1-208ENST00000493377 SCARF1Q14162 830 aa10.67□□□□□ -0.7
SYCP1-208ENST00000493377 RDH13Q8NBN7 331 aa10.67□□□□□ -0.7
SYCP1-208ENST00000493377 MRPL14Q6P1L8 145 aaKnown RBP10.65□□□□□ -0.7
SYCP1-208ENST00000493377 DXOO77932 396 aaKnown RBP10.64□□□□□ -0.71
SYCP1-208ENST00000493377 Q3C1V9 767 aa10.63□□□□□ -0.71
SYCP1-208ENST00000493377 EHBP1Q8NDI1 1231 aa10.62□□□□□ -0.71
SYCP1-208ENST00000493377 SOBPA7XYQ1 873 aa10.61□□□□□ -0.71
SYCP1-208ENST00000493377 PPFIA3O75145 1194 aa10.61□□□□□ -0.71
SYCP1-208ENST00000493377 GCGRP47871 477 aa10.61□□□□□ -0.71
SYCP1-208ENST00000493377 PURBQ96QR8 312 aaKnown RBP10.61□□□□□ -0.71
SYCP1-208ENST00000493377 KRT76Q01546 638 aa10.6□□□□□ -0.71
SYCP1-208ENST00000493377 GRIPAP1Q4V328 841 aa10.6□□□□□ -0.71
SYCP1-208ENST00000493377 WDR70Q9NW82 654 aa10.6□□□□□ -0.71
SYCP1-208ENST00000493377 ZNF385CQ66K41 422 aaPredicted RBP10.59□□□□□ -0.71
SYCP1-208ENST00000493377 CCDC24Q8N4L8 307 aa10.59□□□□□ -0.71
SYCP1-208ENST00000493377 SVOPQ8N4V2 548 aa10.59□□□□□ -0.71
SYCP1-208ENST00000493377 DAXXQ9UER7 740 aaPredicted RBP10.59□□□□□ -0.71
SYCP1-208ENST00000493377 MSTNO14793 375 aa10.58□□□□□ -0.72
SYCP1-208ENST00000493377 METTL3Q86U44 580 aaKnown RBP10.58□□□□□ -0.72
SYCP1-208ENST00000493377 CNTNAP3BQ96NU0 1288 aa10.58□□□□□ -0.72
SYCP1-208ENST00000493377 CNTNAP3Q9BZ76 1288 aa10.58□□□□□ -0.72
SYCP1-208ENST00000493377 SCARF2Q96GP6 870 aaPredicted RBP10.56□□□□□ -0.72
SYCP1-208ENST00000493377 DDX11L8A8MPP1 907 aa10.55□□□□□ -0.72
SYCP1-208ENST00000493377 MAN1A2O60476 641 aa10.55□□□□□ -0.72
SYCP1-208ENST00000493377 USB1Q9BQ65 265 aaKnown RBP10.55□□□□□ -0.72
SYCP1-208ENST00000493377 MARSP56192 900 aaKnown RBP10.54□□□□□ -0.72
SYCP1-208ENST00000493377 Q8N3U1 123 aa10.54□□□□□ -0.72
SYCP1-208ENST00000493377 NUTM2FA1L443 756 aa10.52□□□□□ -0.73
SYCP1-208ENST00000493377 FCHSD2O94868 740 aa10.52□□□□□ -0.73
SYCP1-208ENST00000493377 ARHGEF15O94989 841 aa10.52□□□□□ -0.73
SYCP1-208ENST00000493377 MLLT3P42568 568 aaPredicted RBP10.52□□□□□ -0.73
SYCP1-208ENST00000493377 SULF1Q8IWU6 871 aa10.52□□□□□ -0.73
SYCP1-208ENST00000493377 SPOCK3Q9BQ16 436 aa10.51□□□□□ -0.73
SYCP1-208ENST00000493377 GPR161Q8N6U8 529 aaKnown RBP10.49□□□□□ -0.73
SYCP1-208ENST00000493377 ADH1CP00326 375 aa10.48□□□□□ -0.73
SYCP1-208ENST00000493377 TIMP2P16035 220 aa10.48□□□□□ -0.73
SYCP1-208ENST00000493377 NNTQ13423 1086 aa10.48□□□□□ -0.73
SYCP1-208ENST00000493377 PLA2G4EQ3MJ16 856 aa10.48□□□□□ -0.73
SYCP1-208ENST00000493377 LCE3BQ5TA77 95 aa10.48□□□□□ -0.73
SYCP1-208ENST00000493377 SLURP2P0DP57 97 aa10.47□□□□□ -0.73
SYCP1-208ENST00000493377 COL25A1Q9BXS0 654 aaPredicted RBP10.47□□□□□ -0.73
SYCP1-208ENST00000493377 PLEKHG3A1L390 1219 aa10.46□□□□□ -0.73
SYCP1-208ENST00000493377 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.73
SYCP1-208ENST00000493377 K7ELQ4 463 aaPredicted RBP10.45□□□□□ -0.74
SYCP1-208ENST00000493377 WDR4P57081 412 aaKnown RBP10.44□□□□□ -0.74
SYCP1-208ENST00000493377 MPNDQ8N594 471 aa10.44□□□□□ -0.74
SYCP1-208ENST00000493377 WHAMMQ8TF30 809 aa10.43□□□□□ -0.74
SYCP1-208ENST00000493377 TLL2Q9Y6L7 1015 aa10.43□□□□□ -0.74
SYCP1-208ENST00000493377 PROCP04070 461 aa10.42□□□□□ -0.74
SYCP1-208ENST00000493377 SH3BP2P78314 561 aa10.41□□□□□ -0.74
SYCP1-208ENST00000493377 GALNT6Q8NCL4 622 aa10.41□□□□□ -0.74
SYCP1-208ENST00000493377 NANOS1Q8WY41 292 aaKnown RBP10.4□□□□□ -0.74
SYCP1-208ENST00000493377 KLF16Q9BXK1 252 aaPredicted RBP10.4□□□□□ -0.74
SYCP1-208ENST00000493377 JUNDP17535 347 aa10.39□□□□□ -0.75
SYCP1-208ENST00000493377 RNFT1Q5M7Z0 435 aa10.39□□□□□ -0.75
SYCP1-208ENST00000493377 DCAF5Q96JK2 942 aa10.38□□□□□ -0.75
SYCP1-208ENST00000493377 ITGB2P05107 769 aa10.37□□□□□ -0.75
SYCP1-208ENST00000493377 HIC1Q14526 733 aa10.37□□□□□ -0.75
SYCP1-208ENST00000493377 C6orf118Q5T5N4 469 aa10.37□□□□□ -0.75
SYCP1-208ENST00000493377 PTCRAQ6ISU1 281 aaPredicted RBP10.37□□□□□ -0.75
SYCP1-208ENST00000493377 KRTAP4-12Q9BQ66 201 aa10.36□□□□□ -0.75
SYCP1-208ENST00000493377 NUDT12Q9BQG2 462 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms