RNA–Protein interactions for RNA: ENST00000493259.5

CPA4-210, Transcript of carboxypeptidase A4, humanhuman

TSL 2 BASIC

Gene CPA4, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-210ENST00000493259 CCDC125Q86Z20 511 aa16.63■□□□□ 0.25
CPA4-210ENST00000493259 ESCO1Q5FWF5 840 aa16.62■□□□□ 0.25
CPA4-210ENST00000493259 PRAG1Q86YV5 1406 aa16.61■□□□□ 0.25
CPA4-210ENST00000493259 NPHP3Q7Z494 1330 aa16.61■□□□□ 0.25
CPA4-210ENST00000493259 VGFO15240 615 aaPredicted RBP16.61■□□□□ 0.25
CPA4-210ENST00000493259 GJD4Q96KN9 370 aaPredicted RBP16.61■□□□□ 0.25
CPA4-210ENST00000493259 HFM1A2PYH4 1435 aa16.61■□□□□ 0.25
CPA4-210ENST00000493259 XPCQ01831 940 aaPredicted RBP16.6■□□□□ 0.25
CPA4-210ENST00000493259 PXDNQ92626 1479 aa16.6■□□□□ 0.25
CPA4-210ENST00000493259 MARF1Q9Y4F3 1742 aaKnown RBP16.59■□□□□ 0.25
CPA4-210ENST00000493259 FOXO3O43524 673 aa16.58■□□□□ 0.24
CPA4-210ENST00000493259 CDC42BPGQ6DT37 1551 aa16.58■□□□□ 0.24
CPA4-210ENST00000493259 PPARGC1BQ86YN6 1023 aaKnown RBP16.56■□□□□ 0.24
CPA4-210ENST00000493259 NUTM2FA1L443 756 aa16.55■□□□□ 0.24
CPA4-210ENST00000493259 RPGRIP1LQ68CZ1 1315 aa16.55■□□□□ 0.24
CPA4-210ENST00000493259 GLI3P10071 1580 aa16.55■□□□□ 0.24
CPA4-210ENST00000493259 BLMP54132 1417 aaPredicted RBP16.55■□□□□ 0.24
CPA4-210ENST00000493259 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.54■□□□□ 0.24
CPA4-210ENST00000493259 RALGAPBQ86X10 1494 aa16.54■□□□□ 0.24
CPA4-210ENST00000493259 DEFB132Q7Z7B7 95 aa16.54■□□□□ 0.24
CPA4-210ENST00000493259 UNC5CLQ8IV45 518 aa16.54■□□□□ 0.24
CPA4-210ENST00000493259 LRPPRCP42704 1394 aaKnown RBP16.54■□□□□ 0.24
CPA4-210ENST00000493259 PPLO60437 1756 aa16.53■□□□□ 0.24
CPA4-210ENST00000493259 NAIPQ13075 1403 aa16.52■□□□□ 0.24
CPA4-210ENST00000493259 SLIT2O94813 1529 aa16.52■□□□□ 0.24
CPA4-210ENST00000493259 WAPLQ7Z5K2 1190 aa16.51■□□□□ 0.23
CPA4-210ENST00000493259 STK26Q9P289 416 aa16.5■□□□□ 0.23
CPA4-210ENST00000493259 SPATA31A3Q5VYP0 1347 aa16.49■□□□□ 0.23
CPA4-210ENST00000493259 BRWD3Q6RI45 1802 aa16.49■□□□□ 0.23
CPA4-210ENST00000493259 SF3B2Q13435 895 aaKnown RBP16.49■□□□□ 0.23
CPA4-210ENST00000493259 USP32Q8NFA0 1604 aa16.49■□□□□ 0.23
CPA4-210ENST00000493259 SEPT12Q8IYM1 358 aa16.48■□□□□ 0.23
CPA4-210ENST00000493259 ADGRF5Q8IZF2 1346 aa16.48■□□□□ 0.23
CPA4-210ENST00000493259 PLEKHH1Q9ULM0 1364 aa16.47■□□□□ 0.23
CPA4-210ENST00000493259 TECPR2O15040 1411 aa16.46■□□□□ 0.23
CPA4-210ENST00000493259 SLC4A1APQ9BWU0 796 aaKnown RBP16.46■□□□□ 0.23
CPA4-210ENST00000493259 CCDC144AA2RUR9 1427 aa16.46■□□□□ 0.23
CPA4-210ENST00000493259 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
CPA4-210ENST00000493259 HAP1P54257 671 aaPredicted RBP16.45■□□□□ 0.22
CPA4-210ENST00000493259 KRT28Q7Z3Y7 464 aa16.45■□□□□ 0.22
CPA4-210ENST00000493259 KIF1AQ12756 1690 aa16.45■□□□□ 0.22
CPA4-210ENST00000493259 RRBP1Q9P2E9 1410 aaKnown RBP16.45■□□□□ 0.22
CPA4-210ENST00000493259 LRP5O75197 1615 aa16.45■□□□□ 0.22
CPA4-210ENST00000493259 VPS72Q15906 364 aa16.45■□□□□ 0.22
CPA4-210ENST00000493259 FMN2Q9NZ56 1722 aa16.44■□□□□ 0.22
CPA4-210ENST00000493259 TMEM132EQ6IEE7 984 aa16.44■□□□□ 0.22
CPA4-210ENST00000493259 CABLES1Q8TDN4 633 aa16.44■□□□□ 0.22
CPA4-210ENST00000493259 CCDC9Q9Y3X0 531 aaKnown RBP16.44■□□□□ 0.22
CPA4-210ENST00000493259 ABCC11Q96J66 1382 aa16.43■□□□□ 0.22
CPA4-210ENST00000493259 PLCH1Q4KWH8 1693 aa16.43■□□□□ 0.22
CPA4-210ENST00000493259 KNDC1Q76NI1 1749 aa16.43■□□□□ 0.22
CPA4-210ENST00000493259 RGL3Q3MIN7 710 aa16.42■□□□□ 0.22
CPA4-210ENST00000493259 KRT27Q7Z3Y8 459 aa16.42■□□□□ 0.22
CPA4-210ENST00000493259 TNS3Q68CZ2 1445 aa16.42■□□□□ 0.22
CPA4-210ENST00000493259 PSDA5PKW4 1024 aaPredicted RBP16.41■□□□□ 0.22
CPA4-210ENST00000493259 ONECUT3O60422 494 aaPredicted RBP16.41■□□□□ 0.22
CPA4-210ENST00000493259 NWD2Q9ULI1 1742 aa16.4■□□□□ 0.22
CPA4-210ENST00000493259 PHF8Q9UPP1 1060 aa16.4■□□□□ 0.22
CPA4-210ENST00000493259 A0A0G2JS52 829 aa16.39■□□□□ 0.21
CPA4-210ENST00000493259 MYT1Q01538 1121 aa16.39■□□□□ 0.21
CPA4-210ENST00000493259 PSME1Q06323 249 aa16.39■□□□□ 0.21
CPA4-210ENST00000493259 LMOD2Q6P5Q4 547 aa16.39■□□□□ 0.21
CPA4-210ENST00000493259 SPATA31E1Q6ZUB1 1445 aa16.38■□□□□ 0.21
CPA4-210ENST00000493259 YTHDC2Q9H6S0 1430 aaKnown RBP16.38■□□□□ 0.21
CPA4-210ENST00000493259 IFT172Q9UG01 1749 aa16.38■□□□□ 0.21
CPA4-210ENST00000493259 ANKRD30BQ9BXX2 1392 aa16.38■□□□□ 0.21
CPA4-210ENST00000493259 BAG6P46379 1132 aa16.38■□□□□ 0.21
CPA4-210ENST00000493259 RGPD8O14715 1765 aaPredicted RBP16.38■□□□□ 0.21
CPA4-210ENST00000493259 ABCA3Q99758 1704 aa16.38■□□□□ 0.21
CPA4-210ENST00000493259 PIK3C2GO75747 1445 aa16.38■□□□□ 0.21
CPA4-210ENST00000493259 HRCP23327 699 aa16.37■□□□□ 0.21
CPA4-210ENST00000493259 FAM83GA6ND36 823 aa16.36■□□□□ 0.21
CPA4-210ENST00000493259 SBNO1A3KN83 1393 aa16.36■□□□□ 0.21
CPA4-210ENST00000493259 NRXN1Q9ULB1 1477 aa16.35■□□□□ 0.21
CPA4-210ENST00000493259 FAM98CQ17RN3 349 aaKnown RBP16.35■□□□□ 0.21
CPA4-210ENST00000493259 ARHGEF10O15013 1369 aa16.35■□□□□ 0.21
CPA4-210ENST00000493259 EN1Q05925 392 aaPredicted RBP16.34■□□□□ 0.21
CPA4-210ENST00000493259 SIRT1Q96EB6 747 aa16.34■□□□□ 0.21
CPA4-210ENST00000493259 NRAPQ86VF7 1730 aa16.33■□□□□ 0.2
CPA4-210ENST00000493259 SAFB2Q14151 953 aaKnown RBP eCLIP16.32■□□□□ 0.2
CPA4-210ENST00000493259 PMFBP1Q8TBY8 1022 aa16.32■□□□□ 0.2
CPA4-210ENST00000493259 BTG4Q9NY30 223 aa16.32■□□□□ 0.2
CPA4-210ENST00000493259 FAM182BQ5T319 152 aa16.31■□□□□ 0.2
CPA4-210ENST00000493259 R3HDM1Q15032 1099 aaKnown RBP16.3■□□□□ 0.2
CPA4-210ENST00000493259 PRAM1Q96QH2 718 aa16.3■□□□□ 0.2
CPA4-210ENST00000493259 RGPD1P0DJD0 1748 aa16.3■□□□□ 0.2
CPA4-210ENST00000493259 C14orf93Q9H972 538 aaKnown RBP16.29■□□□□ 0.2
CPA4-210ENST00000493259 DHX57Q6P158 1386 aaKnown RBP16.29■□□□□ 0.2
CPA4-210ENST00000493259 CFAP70Q5T0N1 1121 aa16.29■□□□□ 0.2
CPA4-210ENST00000493259 MPHOSPH9Q99550 1183 aa16.28■□□□□ 0.2
CPA4-210ENST00000493259 COL14A1Q05707 1796 aaKnown RBP16.28■□□□□ 0.2
CPA4-210ENST00000493259 ANKARQ7Z5J8 1434 aa16.27■□□□□ 0.2
CPA4-210ENST00000493259 TRPM3Q9HCF6 1732 aaPredicted RBP16.26■□□□□ 0.19
CPA4-210ENST00000493259 SPATA31A5Q5VU36 1347 aa16.26■□□□□ 0.19
CPA4-210ENST00000493259 SPATA31A7Q8IWB4 1347 aa16.26■□□□□ 0.19
CPA4-210ENST00000493259 EZH2Q15910 746 aaKnown RBP16.25■□□□□ 0.19
CPA4-210ENST00000493259 POGKQ9P215 609 aa16.25■□□□□ 0.19
CPA4-210ENST00000493259 TNS1Q9HBL0 1735 aaKnown RBP16.25■□□□□ 0.19
CPA4-210ENST00000493259 DISP2A7MBM2 1401 aa16.25■□□□□ 0.19
CPA4-210ENST00000493259 ALS2Q96Q42 1657 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms