RNA–Protein interactions for RNA: ENST00000493212.1

PHTF1-212, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 956 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-212ENST00000493212 PIK3C2GO75747 1445 aa30.92■■■□□ 2.54
PHTF1-212ENST00000493212 UPF1Q92900 1129 aaKnown RBP eCLIP30.92■■■□□ 2.54
PHTF1-212ENST00000493212 LRPPRCP42704 1394 aaKnown RBP30.92■■■□□ 2.54
PHTF1-212ENST00000493212 C8orf37Q96NL8 207 aa30.91■■■□□ 2.54
PHTF1-212ENST00000493212 ABCC11Q96J66 1382 aa30.9■■■□□ 2.54
PHTF1-212ENST00000493212 KNDC1Q76NI1 1749 aa30.9■■■□□ 2.54
PHTF1-212ENST00000493212 COL22A1Q8NFW1 1626 aaPredicted RBP30.89■■■□□ 2.54
PHTF1-212ENST00000493212 WAPLQ7Z5K2 1190 aa30.86■■■□□ 2.53
PHTF1-212ENST00000493212 PXDNQ92626 1479 aa30.86■■■□□ 2.53
PHTF1-212ENST00000493212 ACIN1Q9UKV3 1341 aaKnown RBP30.85■■■□□ 2.53
PHTF1-212ENST00000493212 QTRT2Q9H974 415 aaKnown RBP30.85■■■□□ 2.53
PHTF1-212ENST00000493212 PLEKHH1Q9ULM0 1364 aa30.84■■■□□ 2.53
PHTF1-212ENST00000493212 ADAMTS2O95450 1211 aa30.84■■■□□ 2.53
PHTF1-212ENST00000493212 TMEM132EQ6IEE7 984 aa30.84■■■□□ 2.53
PHTF1-212ENST00000493212 STK26Q9P289 416 aa30.84■■■□□ 2.53
PHTF1-212ENST00000493212 RGS12O14924 1447 aa30.83■■■□□ 2.53
PHTF1-212ENST00000493212 NPHP3Q7Z494 1330 aa30.83■■■□□ 2.53
PHTF1-212ENST00000493212 RBM6P78332 1123 aaKnown RBP30.83■■■□□ 2.53
PHTF1-212ENST00000493212 ESCO1Q5FWF5 840 aa30.83■■■□□ 2.53
PHTF1-212ENST00000493212 NRXN1Q9ULB1 1477 aa30.82■■■□□ 2.53
PHTF1-212ENST00000493212 MYOM2P54296 1465 aa30.82■■■□□ 2.52
PHTF1-212ENST00000493212 YTHDC2Q9H6S0 1430 aaKnown RBP30.81■■■□□ 2.52
PHTF1-212ENST00000493212 NGLY1Q96IV0 654 aa30.81■■■□□ 2.52
PHTF1-212ENST00000493212 FNBP4Q8N3X1 1017 aaPredicted RBP30.78■■■□□ 2.52
PHTF1-212ENST00000493212 C14orf93Q9H972 538 aaKnown RBP30.78■■■□□ 2.52
PHTF1-212ENST00000493212 FMN2Q9NZ56 1722 aa30.78■■■□□ 2.52
PHTF1-212ENST00000493212 SIRT1Q96EB6 747 aa30.77■■■□□ 2.52
PHTF1-212ENST00000493212 FOXO3O43524 673 aa30.76■■■□□ 2.51
PHTF1-212ENST00000493212 USP21Q9UK80 565 aa30.73■■■□□ 2.51
PHTF1-212ENST00000493212 RAB3GAP2Q9H2M9 1393 aa30.72■■■□□ 2.51
PHTF1-212ENST00000493212 NUTM2FA1L443 756 aa30.72■■■□□ 2.51
PHTF1-212ENST00000493212 XPCQ01831 940 aaPredicted RBP30.71■■■□□ 2.51
PHTF1-212ENST00000493212 ATRNO75882 1429 aa30.71■■■□□ 2.51
PHTF1-212ENST00000493212 KIF1AQ12756 1690 aa30.71■■■□□ 2.51
PHTF1-212ENST00000493212 MARF1Q9Y4F3 1742 aaKnown RBP30.7■■■□□ 2.5
PHTF1-212ENST00000493212 CFAP70Q5T0N1 1121 aa30.69■■■□□ 2.5
PHTF1-212ENST00000493212 TRPC5Q9UL62 973 aaPredicted RBP30.69■■■□□ 2.5
PHTF1-212ENST00000493212 BCL9LQ86UU0 1499 aa30.67■■■□□ 2.5
PHTF1-212ENST00000493212 DHX57Q6P158 1386 aaKnown RBP30.66■■■□□ 2.5
PHTF1-212ENST00000493212 SPATA31A3Q5VYP0 1347 aa30.64■■■□□ 2.5
PHTF1-212ENST00000493212 DLC1Q96QB1 1528 aa30.63■■■□□ 2.49
PHTF1-212ENST00000493212 RGPD8O14715 1765 aaPredicted RBP30.61■■■□□ 2.49
PHTF1-212ENST00000493212 ADGRB1O14514 1584 aa30.61■■■□□ 2.49
PHTF1-212ENST00000493212 PRAM1Q96QH2 718 aa30.59■■■□□ 2.49
PHTF1-212ENST00000493212 KRT28Q7Z3Y7 464 aa30.58■■■□□ 2.49
PHTF1-212ENST00000493212 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.58■■■□□ 2.49
PHTF1-212ENST00000493212 ATAD2Q6PL18 1390 aa30.57■■■□□ 2.48
PHTF1-212ENST00000493212 PHF8Q9UPP1 1060 aa30.57■■■□□ 2.48
PHTF1-212ENST00000493212 ADGRB2O60241 1585 aa30.56■■■□□ 2.48
PHTF1-212ENST00000493212 SLIT2O94813 1529 aa30.56■■■□□ 2.48
PHTF1-212ENST00000493212 TNS3Q68CZ2 1445 aa30.55■■■□□ 2.48
PHTF1-212ENST00000493212 USP32Q8NFA0 1604 aa30.55■■■□□ 2.48
PHTF1-212ENST00000493212 SAFB2Q14151 953 aaKnown RBP eCLIP30.52■■■□□ 2.48
PHTF1-212ENST00000493212 ANKARQ7Z5J8 1434 aa30.52■■■□□ 2.48
PHTF1-212ENST00000493212 SBNO1A3KN83 1393 aa30.52■■■□□ 2.48
PHTF1-212ENST00000493212 GJD4Q96KN9 370 aaPredicted RBP30.51■■■□□ 2.47
PHTF1-212ENST00000493212 EP400Q96L91 3159 aa30.5■■■□□ 2.47
PHTF1-212ENST00000493212 HRCP23327 699 aa30.48■■■□□ 2.47
PHTF1-212ENST00000493212 PSME1Q06323 249 aa30.48■■■□□ 2.47
PHTF1-212ENST00000493212 UNC5CLQ8IV45 518 aa30.48■■■□□ 2.47
PHTF1-212ENST00000493212 POGKQ9P215 609 aa30.48■■■□□ 2.47
PHTF1-212ENST00000493212 GLI3P10071 1580 aa30.48■■■□□ 2.47
PHTF1-212ENST00000493212 ABCA3Q99758 1704 aa30.46■■■□□ 2.47
PHTF1-212ENST00000493212 RALGAPBQ86X10 1494 aa30.45■■■□□ 2.47
PHTF1-212ENST00000493212 STAC3Q96MF2 364 aa30.45■■■□□ 2.47
PHTF1-212ENST00000493212 DCAF11Q8TEB1 546 aa30.44■■■□□ 2.46
PHTF1-212ENST00000493212 TRAK1Q9UPV9 953 aa30.44■■■□□ 2.46
PHTF1-212ENST00000493212 ARHGEF10O15013 1369 aa30.43■■■□□ 2.46
PHTF1-212ENST00000493212 CABLES1Q8TDN4 633 aa30.42■■■□□ 2.46
PHTF1-212ENST00000493212 TRPM3Q9HCF6 1732 aaPredicted RBP30.42■■■□□ 2.46
PHTF1-212ENST00000493212 KDM2AQ9Y2K7 1162 aa30.41■■■□□ 2.46
PHTF1-212ENST00000493212 PMFBP1Q8TBY8 1022 aa30.4■■■□□ 2.46
PHTF1-212ENST00000493212 TULP4Q9NRJ4 1543 aa30.4■■■□□ 2.46
PHTF1-212ENST00000493212 PRR36Q9H6K5 1346 aa30.4■■■□□ 2.46
PHTF1-212ENST00000493212 PLCH1Q4KWH8 1693 aa30.39■■■□□ 2.46
PHTF1-212ENST00000493212 NWD2Q9ULI1 1742 aa30.39■■■□□ 2.46
PHTF1-212ENST00000493212 HIRIP3Q9BW71 556 aaPredicted RBP30.39■■■□□ 2.46
PHTF1-212ENST00000493212 MINK1Q8N4C8 1332 aaPredicted RBP30.37■■■□□ 2.45
PHTF1-212ENST00000493212 EIF3AQ14152 1382 aaKnown RBP30.37■■■□□ 2.45
PHTF1-212ENST00000493212 ALS2Q96Q42 1657 aa30.36■■■□□ 2.45
PHTF1-212ENST00000493212 WASLO00401 505 aaPredicted RBP30.35■■■□□ 2.45
PHTF1-212ENST00000493212 HAP1P54257 671 aaPredicted RBP30.35■■■□□ 2.45
PHTF1-212ENST00000493212 VPS72Q15906 364 aa30.35■■■□□ 2.45
PHTF1-212ENST00000493212 CCDC125Q86Z20 511 aa30.35■■■□□ 2.45
PHTF1-212ENST00000493212 ARHGEF28Q8N1W1 1705 aaKnown RBP30.34■■■□□ 2.45
PHTF1-212ENST00000493212 LMOD2Q6P5Q4 547 aa30.33■■■□□ 2.45
PHTF1-212ENST00000493212 BRWD3Q6RI45 1802 aa30.31■■■□□ 2.44
PHTF1-212ENST00000493212 FAM83GA6ND36 823 aa30.3■■■□□ 2.44
PHTF1-212ENST00000493212 ONECUT3O60422 494 aaPredicted RBP30.3■■■□□ 2.44
PHTF1-212ENST00000493212 GPRASP1Q5JY77 1395 aa30.29■■■□□ 2.44
PHTF1-212ENST00000493212 PLEKHG5O94827 1062 aa30.29■■■□□ 2.44
PHTF1-212ENST00000493212 NRAPQ86VF7 1730 aa30.28■■■□□ 2.44
PHTF1-212ENST00000493212 SRCAPQ6ZRS2 3230 aa30.28■■■□□ 2.44
PHTF1-212ENST00000493212 CRYBG1Q9Y4K1 1723 aa30.27■■■□□ 2.44
PHTF1-212ENST00000493212 ATP7BP35670 1465 aa30.27■■■□□ 2.44
PHTF1-212ENST00000493212 SEPT12Q8IYM1 358 aa30.27■■■□□ 2.44
PHTF1-212ENST00000493212 BLMP54132 1417 aaPredicted RBP30.25■■■□□ 2.43
PHTF1-212ENST00000493212 ITSN1Q15811 1721 aa30.23■■■□□ 2.43
PHTF1-212ENST00000493212 KIAA1210Q9ULL0 1709 aa30.23■■■□□ 2.43
PHTF1-212ENST00000493212 COL14A1Q05707 1796 aaKnown RBP30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms