RNA–Protein interactions for RNA: ENST00000493107.5

SEC22C-216, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 827 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-216ENST00000493107 AMOTL2Q9Y2J4 779 aa13.04□□□□□ -0.32
SEC22C-216ENST00000493107 POLR1AO95602 1720 aaPredicted RBP13.03□□□□□ -0.32
SEC22C-216ENST00000493107 CDCA8Q53HL2 280 aa13.03□□□□□ -0.32
SEC22C-216ENST00000493107 POGKQ9P215 609 aa13.03□□□□□ -0.32
SEC22C-216ENST00000493107 PIK3R4Q99570 1358 aa13.03□□□□□ -0.32
SEC22C-216ENST00000493107 NPHP4O75161 1426 aaPredicted RBP13.03□□□□□ -0.32
SEC22C-216ENST00000493107 LMTK3Q96Q04 1460 aa13.03□□□□□ -0.32
SEC22C-216ENST00000493107 HSPA2P54652 639 aa13.02□□□□□ -0.33
SEC22C-216ENST00000493107 CABP2Q9NPB3 220 aa13.02□□□□□ -0.33
SEC22C-216ENST00000493107 MINK1Q8N4C8 1332 aaPredicted RBP13.02□□□□□ -0.33
SEC22C-216ENST00000493107 CPS1P31327 1500 aa13.02□□□□□ -0.33
SEC22C-216ENST00000493107 DIP2AQ14689 1571 aa13.02□□□□□ -0.33
SEC22C-216ENST00000493107 EVC2Q86UK5 1308 aa13.01□□□□□ -0.33
SEC22C-216ENST00000493107 QRICH2Q9H0J4 1663 aa13□□□□□ -0.33
SEC22C-216ENST00000493107 PTCH1Q13635 1447 aa13□□□□□ -0.33
SEC22C-216ENST00000493107 KCNA6P17658 529 aa13□□□□□ -0.33
SEC22C-216ENST00000493107 CDK19Q9BWU1 502 aa13□□□□□ -0.33
SEC22C-216ENST00000493107 CARD14Q9BXL6 1004 aa13□□□□□ -0.33
SEC22C-216ENST00000493107 SLC12A5Q9H2X9 1139 aa13□□□□□ -0.33
SEC22C-216ENST00000493107 PRKRIP1Q9H875 184 aaPredicted RBP13□□□□□ -0.33
SEC22C-216ENST00000493107 KNDC1Q76NI1 1749 aa12.99□□□□□ -0.33
SEC22C-216ENST00000493107 WASLO00401 505 aaPredicted RBP12.98□□□□□ -0.33
SEC22C-216ENST00000493107 ANP32CO43423 234 aa12.98□□□□□ -0.33
SEC22C-216ENST00000493107 XRN1Q8IZH2 1706 aaKnown RBP12.96□□□□□ -0.33
SEC22C-216ENST00000493107 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.33
SEC22C-216ENST00000493107 AMER1Q5JTC6 1135 aaPredicted RBP12.96□□□□□ -0.33
SEC22C-216ENST00000493107 MYOM1P52179 1685 aa12.96□□□□□ -0.34
SEC22C-216ENST00000493107 PRR36Q9H6K5 1346 aa12.95□□□□□ -0.34
SEC22C-216ENST00000493107 CCER2I3L3R5 266 aa12.95□□□□□ -0.34
SEC22C-216ENST00000493107 CCDC184Q52MB2 194 aa12.95□□□□□ -0.34
SEC22C-216ENST00000493107 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.95□□□□□ -0.34
SEC22C-216ENST00000493107 CD163L1Q9NR16 1453 aa12.95□□□□□ -0.34
SEC22C-216ENST00000493107 SRPK2P78362 688 aaKnown RBP12.94□□□□□ -0.34
SEC22C-216ENST00000493107 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
SEC22C-216ENST00000493107 TMC1Q8TDI8 760 aa12.92□□□□□ -0.34
SEC22C-216ENST00000493107 NUDT16Q96DE0 195 aaKnown RBP12.92□□□□□ -0.34
SEC22C-216ENST00000493107 CABP1Q9NZU7 370 aa12.92□□□□□ -0.34
SEC22C-216ENST00000493107 ANKRD36BQ8N2N9 1353 aa12.92□□□□□ -0.34
SEC22C-216ENST00000493107 PARD3Q8TEW0 1356 aa12.92□□□□□ -0.34
SEC22C-216ENST00000493107 NPC1L1Q9UHC9 1359 aa12.92□□□□□ -0.34
SEC22C-216ENST00000493107 ADGRB2O60241 1585 aa12.91□□□□□ -0.34
SEC22C-216ENST00000493107 RBM33Q96EV2 1170 aaKnown RBP12.91□□□□□ -0.34
SEC22C-216ENST00000493107 NINLQ9Y2I6 1382 aa12.91□□□□□ -0.34
SEC22C-216ENST00000493107 NWD1Q149M9 1564 aa12.9□□□□□ -0.34
SEC22C-216ENST00000493107 SOCS7O14512 581 aa12.9□□□□□ -0.34
SEC22C-216ENST00000493107 A0A1W2PP64 1363 aa12.9□□□□□ -0.34
SEC22C-216ENST00000493107 ATP7BP35670 1465 aa12.9□□□□□ -0.34
SEC22C-216ENST00000493107 RALBP1Q15311 655 aa12.89□□□□□ -0.35
SEC22C-216ENST00000493107 CC2D1BQ5T0F9 858 aaKnown RBP12.89□□□□□ -0.35
SEC22C-216ENST00000493107 KNSTRNQ9Y448 316 aa12.89□□□□□ -0.35
SEC22C-216ENST00000493107 CCDC61Q9Y6R9 512 aa12.89□□□□□ -0.35
SEC22C-216ENST00000493107 CHD2O14647 1828 aaKnown RBP12.89□□□□□ -0.35
SEC22C-216ENST00000493107 PLEKHG3A1L390 1219 aa12.88□□□□□ -0.35
SEC22C-216ENST00000493107 CNGB1Q14028 1251 aaPredicted RBP12.88□□□□□ -0.35
SEC22C-216ENST00000493107 STRCQ7RTU9 1775 aa12.88□□□□□ -0.35
SEC22C-216ENST00000493107 CPSF1Q10570 1443 aaKnown RBP12.88□□□□□ -0.35
SEC22C-216ENST00000493107 NSD3Q9BZ95 1437 aa12.88□□□□□ -0.35
SEC22C-216ENST00000493107 KTN1Q86UP2 1357 aaKnown RBP12.86□□□□□ -0.35
SEC22C-216ENST00000493107 PPIP5K1Q6PFW1 1433 aa12.86□□□□□ -0.35
SEC22C-216ENST00000493107 NUTM2FA1L443 756 aa12.85□□□□□ -0.35
SEC22C-216ENST00000493107 ADGRL3Q9HAR2 1447 aa12.85□□□□□ -0.35
SEC22C-216ENST00000493107 PROSER2Q86WR7 435 aaPredicted RBP12.84□□□□□ -0.35
SEC22C-216ENST00000493107 TERF2IPQ9NYB0 399 aa12.84□□□□□ -0.35
SEC22C-216ENST00000493107 MYBBP1AQ9BQG0 1328 aaKnown RBP12.84□□□□□ -0.35
SEC22C-216ENST00000493107 NKTRP30414 1462 aaKnown RBP12.84□□□□□ -0.35
SEC22C-216ENST00000493107 USP32Q8NFA0 1604 aa12.84□□□□□ -0.35
SEC22C-216ENST00000493107 FYB1O15117 783 aa12.83□□□□□ -0.36
SEC22C-216ENST00000493107 STRCP1A6NGW2 1772 aa12.82□□□□□ -0.36
SEC22C-216ENST00000493107 SSH2Q76I76 1423 aa12.82□□□□□ -0.36
SEC22C-216ENST00000493107 ANKARQ7Z5J8 1434 aa12.82□□□□□ -0.36
SEC22C-216ENST00000493107 PPP2R1AP30153 589 aa12.82□□□□□ -0.36
SEC22C-216ENST00000493107 ACEP12821 1306 aa12.82□□□□□ -0.36
SEC22C-216ENST00000493107 ZNF335Q9H4Z2 1342 aaPredicted RBP12.82□□□□□ -0.36
SEC22C-216ENST00000493107 TMEM94Q12767 1356 aa12.81□□□□□ -0.36
SEC22C-216ENST00000493107 NCOA3Q9Y6Q9 1424 aa12.81□□□□□ -0.36
SEC22C-216ENST00000493107 ILDR2Q71H61 639 aa12.81□□□□□ -0.36
SEC22C-216ENST00000493107 HDGFL2Q7Z4V5 671 aaPredicted RBP12.81□□□□□ -0.36
SEC22C-216ENST00000493107 POLR3AO14802 1390 aaPredicted RBP12.81□□□□□ -0.36
SEC22C-216ENST00000493107 BRD4O60885 1362 aaPredicted RBP12.81□□□□□ -0.36
SEC22C-216ENST00000493107 NLRP13Q86W25 1043 aa12.8□□□□□ -0.36
SEC22C-216ENST00000493107 PNISRQ8TF01 805 aaKnown RBP12.8□□□□□ -0.36
SEC22C-216ENST00000493107 ZNF692Q9BU19 519 aaPredicted RBP12.8□□□□□ -0.36
SEC22C-216ENST00000493107 C19orf44Q9H6X5 657 aa12.8□□□□□ -0.36
SEC22C-216ENST00000493107 MRS2Q9HD23 443 aa12.8□□□□□ -0.36
SEC22C-216ENST00000493107 CDC42BPGQ6DT37 1551 aa12.8□□□□□ -0.36
SEC22C-216ENST00000493107 CGNL1Q0VF96 1302 aa12.8□□□□□ -0.36
SEC22C-216ENST00000493107 NALCNQ8IZF0 1738 aa12.79□□□□□ -0.36
SEC22C-216ENST00000493107 PMFBP1Q8TBY8 1022 aa12.79□□□□□ -0.36
SEC22C-216ENST00000493107 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
SEC22C-216ENST00000493107 TOPAZ1Q8N9V7 1692 aa12.79□□□□□ -0.36
SEC22C-216ENST00000493107 EDC4Q6P2E9 1401 aaKnown RBP12.79□□□□□ -0.36
SEC22C-216ENST00000493107 GGNBP2Q9H3C7 697 aa12.78□□□□□ -0.36
SEC22C-216ENST00000493107 ZRANB1Q9UGI0 708 aa12.78□□□□□ -0.36
SEC22C-216ENST00000493107 TTC21BQ7Z4L5 1316 aa12.78□□□□□ -0.36
SEC22C-216ENST00000493107 NSD2O96028 1365 aa12.78□□□□□ -0.36
SEC22C-216ENST00000493107 LRRC7Q96NW7 1537 aa12.78□□□□□ -0.36
SEC22C-216ENST00000493107 USP6P35125 1406 aa12.77□□□□□ -0.37
SEC22C-216ENST00000493107 FMN2Q9NZ56 1722 aa12.76□□□□□ -0.37
SEC22C-216ENST00000493107 MORC1Q86VD1 984 aa12.76□□□□□ -0.37
SEC22C-216ENST00000493107 NME9Q86XW9 330 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms