RNA–Protein interactions for RNA: ENST00000492991.5

C9orf78-206, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-206ENST00000492991 NUTM2AQ8IVF1 878 aaPredicted RBP24.15■■□□□ 1.46
C9orf78-206ENST00000492991 HRCP23327 699 aa24.13■■□□□ 1.45
C9orf78-206ENST00000492991 C14orf93Q9H972 538 aaKnown RBP24.13■■□□□ 1.45
C9orf78-206ENST00000492991 RAB3GAP2Q9H2M9 1393 aa24.13■■□□□ 1.45
C9orf78-206ENST00000492991 CDC42BPGQ6DT37 1551 aa24.12■■□□□ 1.45
C9orf78-206ENST00000492991 STK26Q9P289 416 aa24.11■■□□□ 1.45
C9orf78-206ENST00000492991 TMEM132EQ6IEE7 984 aa24.1■■□□□ 1.45
C9orf78-206ENST00000492991 NRXN1Q9ULB1 1477 aa24.1■■□□□ 1.45
C9orf78-206ENST00000492991 RXRBP28702 533 aa24.09■■□□□ 1.45
C9orf78-206ENST00000492991 WAPLQ7Z5K2 1190 aa24.09■■□□□ 1.45
C9orf78-206ENST00000492991 YTHDC2Q9H6S0 1430 aaKnown RBP24.09■■□□□ 1.45
C9orf78-206ENST00000492991 AFF2P51816 1311 aa24.08■■□□□ 1.44
C9orf78-206ENST00000492991 NPHP3Q7Z494 1330 aa24.08■■□□□ 1.44
C9orf78-206ENST00000492991 MYOM2P54296 1465 aa24.07■■□□□ 1.44
C9orf78-206ENST00000492991 ESCO1Q5FWF5 840 aa24.07■■□□□ 1.44
C9orf78-206ENST00000492991 KNDC1Q76NI1 1749 aa24.06■■□□□ 1.44
C9orf78-206ENST00000492991 CDK12Q9NYV4 1490 aaPredicted RBP24.06■■□□□ 1.44
C9orf78-206ENST00000492991 DHX57Q6P158 1386 aaKnown RBP24.05■■□□□ 1.44
C9orf78-206ENST00000492991 STAC3Q96MF2 364 aa24.05■■□□□ 1.44
C9orf78-206ENST00000492991 C8orf37Q96NL8 207 aa24.03■■□□□ 1.44
C9orf78-206ENST00000492991 CFAP70Q5T0N1 1121 aa24.02■■□□□ 1.44
C9orf78-206ENST00000492991 PLEKHH1Q9ULM0 1364 aa24.02■■□□□ 1.44
C9orf78-206ENST00000492991 FOXO3O43524 673 aa24■■□□□ 1.43
C9orf78-206ENST00000492991 NGLY1Q96IV0 654 aa24■■□□□ 1.43
C9orf78-206ENST00000492991 QTRT2Q9H974 415 aaKnown RBP24■■□□□ 1.43
C9orf78-206ENST00000492991 RBM6P78332 1123 aaKnown RBP23.99■■□□□ 1.43
C9orf78-206ENST00000492991 PXDNQ92626 1479 aa23.99■■□□□ 1.43
C9orf78-206ENST00000492991 ADAMTS2O95450 1211 aa23.97■■□□□ 1.43
C9orf78-206ENST00000492991 FNBP4Q8N3X1 1017 aaPredicted RBP23.97■■□□□ 1.43
C9orf78-206ENST00000492991 COL22A1Q8NFW1 1626 aaPredicted RBP23.97■■□□□ 1.43
C9orf78-206ENST00000492991 UPF1Q92900 1129 aaKnown RBP eCLIP23.95■■□□□ 1.42
C9orf78-206ENST00000492991 NUTM2FA1L443 756 aa23.94■■□□□ 1.42
C9orf78-206ENST00000492991 DLC1Q96QB1 1528 aa23.94■■□□□ 1.42
C9orf78-206ENST00000492991 FMN2Q9NZ56 1722 aa23.93■■□□□ 1.42
C9orf78-206ENST00000492991 PRAM1Q96QH2 718 aa23.92■■□□□ 1.42
C9orf78-206ENST00000492991 USP21Q9UK80 565 aa23.91■■□□□ 1.42
C9orf78-206ENST00000492991 TRPC5Q9UL62 973 aaPredicted RBP23.91■■□□□ 1.42
C9orf78-206ENST00000492991 SPATA31A3Q5VYP0 1347 aa23.9■■□□□ 1.42
C9orf78-206ENST00000492991 DCAF11Q8TEB1 546 aa23.9■■□□□ 1.42
C9orf78-206ENST00000492991 KIF1AQ12756 1690 aa23.89■■□□□ 1.42
C9orf78-206ENST00000492991 XPCQ01831 940 aaPredicted RBP23.89■■□□□ 1.41
C9orf78-206ENST00000492991 KRT28Q7Z3Y7 464 aa23.89■■□□□ 1.41
C9orf78-206ENST00000492991 POGKQ9P215 609 aa23.89■■□□□ 1.41
C9orf78-206ENST00000492991 PHF8Q9UPP1 1060 aa23.89■■□□□ 1.41
C9orf78-206ENST00000492991 ADGRB1O14514 1584 aa23.89■■□□□ 1.41
C9orf78-206ENST00000492991 PSME1Q06323 249 aa23.88■■□□□ 1.41
C9orf78-206ENST00000492991 ANKARQ7Z5J8 1434 aa23.86■■□□□ 1.41
C9orf78-206ENST00000492991 KDM2AQ9Y2K7 1162 aa23.86■■□□□ 1.41
C9orf78-206ENST00000492991 RGS12O14924 1447 aa23.85■■□□□ 1.41
C9orf78-206ENST00000492991 ATRNO75882 1429 aa23.84■■□□□ 1.41
C9orf78-206ENST00000492991 SAFB2Q14151 953 aaKnown RBP eCLIP23.84■■□□□ 1.41
C9orf78-206ENST00000492991 SBNO1A3KN83 1393 aa23.83■■□□□ 1.41
C9orf78-206ENST00000492991 TRAK1Q9UPV9 953 aa23.83■■□□□ 1.41
C9orf78-206ENST00000492991 ADGRB2O60241 1585 aa23.82■■□□□ 1.4
C9orf78-206ENST00000492991 BCL9LQ86UU0 1499 aa23.82■■□□□ 1.4
C9orf78-206ENST00000492991 EIF3AQ14152 1382 aaKnown RBP23.81■■□□□ 1.4
C9orf78-206ENST00000492991 TNS3Q68CZ2 1445 aa23.79■■□□□ 1.4
C9orf78-206ENST00000492991 MARF1Q9Y4F3 1742 aaKnown RBP23.78■■□□□ 1.4
C9orf78-206ENST00000492991 RGPD8O14715 1765 aaPredicted RBP23.78■■□□□ 1.4
C9orf78-206ENST00000492991 ARHGEF10O15013 1369 aa23.78■■□□□ 1.4
C9orf78-206ENST00000492991 WASLO00401 505 aaPredicted RBP23.77■■□□□ 1.4
C9orf78-206ENST00000492991 UNC5CLQ8IV45 518 aa23.76■■□□□ 1.39
C9orf78-206ENST00000492991 GJD4Q96KN9 370 aaPredicted RBP23.76■■□□□ 1.39
C9orf78-206ENST00000492991 SLIT2O94813 1529 aa23.75■■□□□ 1.39
C9orf78-206ENST00000492991 PMFBP1Q8TBY8 1022 aa23.74■■□□□ 1.39
C9orf78-206ENST00000492991 MINK1Q8N4C8 1332 aaPredicted RBP23.74■■□□□ 1.39
C9orf78-206ENST00000492991 ATAD2Q6PL18 1390 aa23.74■■□□□ 1.39
C9orf78-206ENST00000492991 USP32Q8NFA0 1604 aa23.73■■□□□ 1.39
C9orf78-206ENST00000492991 HIRIP3Q9BW71 556 aaPredicted RBP23.73■■□□□ 1.39
C9orf78-206ENST00000492991 TULP4Q9NRJ4 1543 aa23.72■■□□□ 1.39
C9orf78-206ENST00000492991 GPRASP1Q5JY77 1395 aa23.71■■□□□ 1.39
C9orf78-206ENST00000492991 PRR36Q9H6K5 1346 aa23.71■■□□□ 1.39
C9orf78-206ENST00000492991 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.7■■□□□ 1.39
C9orf78-206ENST00000492991 HAP1P54257 671 aaPredicted RBP23.7■■□□□ 1.38
C9orf78-206ENST00000492991 LMOD2Q6P5Q4 547 aa23.68■■□□□ 1.38
C9orf78-206ENST00000492991 CABLES1Q8TDN4 633 aa23.68■■□□□ 1.38
C9orf78-206ENST00000492991 CCDC125Q86Z20 511 aa23.67■■□□□ 1.38
C9orf78-206ENST00000492991 VPS72Q15906 364 aa23.66■■□□□ 1.38
C9orf78-206ENST00000492991 KIAA1210Q9ULL0 1709 aa23.66■■□□□ 1.38
C9orf78-206ENST00000492991 NGDNQ8NEJ9 315 aaKnown RBP23.65■■□□□ 1.38
C9orf78-206ENST00000492991 RALGAPBQ86X10 1494 aa23.64■■□□□ 1.38
C9orf78-206ENST00000492991 NUDT16Q96DE0 195 aaKnown RBP23.64■■□□□ 1.37
C9orf78-206ENST00000492991 ARHGEF28Q8N1W1 1705 aaKnown RBP23.64■■□□□ 1.37
C9orf78-206ENST00000492991 FAM83GA6ND36 823 aa23.63■■□□□ 1.37
C9orf78-206ENST00000492991 ONECUT3O60422 494 aaPredicted RBP23.63■■□□□ 1.37
C9orf78-206ENST00000492991 TRPM3Q9HCF6 1732 aaPredicted RBP23.63■■□□□ 1.37
C9orf78-206ENST00000492991 CDK19Q9BWU1 502 aa23.61■■□□□ 1.37
C9orf78-206ENST00000492991 NWD2Q9ULI1 1742 aa23.61■■□□□ 1.37
C9orf78-206ENST00000492991 GLI3P10071 1580 aa23.61■■□□□ 1.37
C9orf78-206ENST00000492991 CCDC61Q9Y6R9 512 aa23.6■■□□□ 1.37
C9orf78-206ENST00000492991 ATP7BP35670 1465 aa23.6■■□□□ 1.37
C9orf78-206ENST00000492991 ALS2Q96Q42 1657 aa23.6■■□□□ 1.37
C9orf78-206ENST00000492991 NBPF1Q3BBV0 1214 aa23.59■■□□□ 1.37
C9orf78-206ENST00000492991 ABCA3Q99758 1704 aa23.59■■□□□ 1.37
C9orf78-206ENST00000492991 PLEKHG3A1L390 1219 aa23.58■■□□□ 1.37
C9orf78-206ENST00000492991 POLR3AO14802 1390 aaPredicted RBP23.57■■□□□ 1.36
C9orf78-206ENST00000492991 ITSN1Q15811 1721 aa23.56■■□□□ 1.36
C9orf78-206ENST00000492991 PAK3O75914 559 aaPredicted RBP23.55■■□□□ 1.36
C9orf78-206ENST00000492991 SEPT12Q8IYM1 358 aa23.55■■□□□ 1.36
C9orf78-206ENST00000492991 PLCH1Q4KWH8 1693 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms