RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 TULP4Q9NRJ4 1543 aa18.93■□□□□ 0.62
PTPN7-216ENST00000492977 CARD14Q9BXL6 1004 aa18.93■□□□□ 0.62
PTPN7-216ENST00000492977 SETD1AO15047 1707 aaKnown RBP18.93■□□□□ 0.62
PTPN7-216ENST00000492977 TMEM2Q9UHN6 1383 aa18.92■□□□□ 0.62
PTPN7-216ENST00000492977 DLC1Q96QB1 1528 aa18.92■□□□□ 0.62
PTPN7-216ENST00000492977 FER1L4A9Z1Z3 1794 aa18.92■□□□□ 0.62
PTPN7-216ENST00000492977 INSRP06213 1382 aa18.92■□□□□ 0.62
PTPN7-216ENST00000492977 C3P01024 1663 aa18.91■□□□□ 0.62
PTPN7-216ENST00000492977 POGKQ9P215 609 aa18.91■□□□□ 0.62
PTPN7-216ENST00000492977 NRXN3Q9Y4C0 1643 aa18.9■□□□□ 0.62
PTPN7-216ENST00000492977 PRAM1Q96QH2 718 aa18.9■□□□□ 0.62
PTPN7-216ENST00000492977 ABCC11Q96J66 1382 aa18.9■□□□□ 0.62
PTPN7-216ENST00000492977 PPP2R1AP30153 589 aa18.89■□□□□ 0.62
PTPN7-216ENST00000492977 SLC12A5Q9H2X9 1139 aa18.89■□□□□ 0.62
PTPN7-216ENST00000492977 NINLQ9Y2I6 1382 aa18.89■□□□□ 0.62
PTPN7-216ENST00000492977 ATXN8OSP0DMR3 200 aa18.89■□□□□ 0.61
PTPN7-216ENST00000492977 CEBPAP49715 358 aaPredicted RBP18.88■□□□□ 0.61
PTPN7-216ENST00000492977 SAFB2Q14151 953 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTPN7-216ENST00000492977 ATAD2Q6PL18 1390 aa18.86■□□□□ 0.61
PTPN7-216ENST00000492977 ANKRD36BQ8N2N9 1353 aa18.86■□□□□ 0.61
PTPN7-216ENST00000492977 SIRT1Q96EB6 747 aa18.85■□□□□ 0.61
PTPN7-216ENST00000492977 CABP2Q9NPB3 220 aa18.85■□□□□ 0.61
PTPN7-216ENST00000492977 USP32Q8NFA0 1604 aa18.85■□□□□ 0.61
PTPN7-216ENST00000492977 NSD3Q9BZ95 1437 aa18.85■□□□□ 0.61
PTPN7-216ENST00000492977 MINK1Q8N4C8 1332 aaPredicted RBP18.84■□□□□ 0.61
PTPN7-216ENST00000492977 SRPK2P78362 688 aaKnown RBP18.84■□□□□ 0.61
PTPN7-216ENST00000492977 SUPT16HQ9Y5B9 1047 aaKnown RBP18.84■□□□□ 0.61
PTPN7-216ENST00000492977 NEFLP07196 543 aa18.83■□□□□ 0.6
PTPN7-216ENST00000492977 METP08581 1390 aa18.83■□□□□ 0.6
PTPN7-216ENST00000492977 PLEKHG1Q9ULL1 1385 aa18.83■□□□□ 0.6
PTPN7-216ENST00000492977 KNDC1Q76NI1 1749 aa18.82■□□□□ 0.6
PTPN7-216ENST00000492977 TECPR2O15040 1411 aa18.82■□□□□ 0.6
PTPN7-216ENST00000492977 EID1Q9Y6B2 187 aa18.81■□□□□ 0.6
PTPN7-216ENST00000492977 CGNL1Q0VF96 1302 aa18.81■□□□□ 0.6
PTPN7-216ENST00000492977 FAM135BQ49AJ0 1406 aa18.81■□□□□ 0.6
PTPN7-216ENST00000492977 SLIT1O75093 1534 aa18.81■□□□□ 0.6
PTPN7-216ENST00000492977 BCANQ96GW7 911 aa18.81■□□□□ 0.6
PTPN7-216ENST00000492977 ARHGAP23Q9P227 1491 aa18.8■□□□□ 0.6
PTPN7-216ENST00000492977 TXNDC2Q86VQ3 553 aa18.8■□□□□ 0.6
PTPN7-216ENST00000492977 THEMISQ8N1K5 641 aaPredicted RBP18.8■□□□□ 0.6
PTPN7-216ENST00000492977 CDK19Q9BWU1 502 aa18.8■□□□□ 0.6
PTPN7-216ENST00000492977 NSD2O96028 1365 aa18.8■□□□□ 0.6
PTPN7-216ENST00000492977 BLMP54132 1417 aaPredicted RBP18.8■□□□□ 0.6
PTPN7-216ENST00000492977 LTKP29376 864 aa18.79■□□□□ 0.6
PTPN7-216ENST00000492977 WAPLQ7Z5K2 1190 aa18.79■□□□□ 0.6
PTPN7-216ENST00000492977 ADAMTS13Q76LX8 1427 aa18.79■□□□□ 0.6
PTPN7-216ENST00000492977 SMG6Q86US8 1419 aaKnown RBP18.79■□□□□ 0.6
PTPN7-216ENST00000492977 TERF2IPQ9NYB0 399 aa18.78■□□□□ 0.6
PTPN7-216ENST00000492977 MORC1Q86VD1 984 aa18.77■□□□□ 0.6
PTPN7-216ENST00000492977 CPS1P31327 1500 aa18.77■□□□□ 0.6
PTPN7-216ENST00000492977 PLEKHH1Q9ULM0 1364 aa18.77■□□□□ 0.59
PTPN7-216ENST00000492977 FKBP8Q14318 412 aa18.76■□□□□ 0.59
PTPN7-216ENST00000492977 WDR43Q15061 677 aaKnown RBP eCLIP18.76■□□□□ 0.59
PTPN7-216ENST00000492977 MED14O60244 1454 aa18.76■□□□□ 0.59
PTPN7-216ENST00000492977 A0A1W2PP64 1363 aa18.75■□□□□ 0.59
PTPN7-216ENST00000492977 NUDCQ9Y266 331 aa18.75■□□□□ 0.59
PTPN7-216ENST00000492977 ADAMTS8Q9UP79 889 aa18.74■□□□□ 0.59
PTPN7-216ENST00000492977 RIMS1Q86UR5 1692 aaKnown RBP18.73■□□□□ 0.59
PTPN7-216ENST00000492977 PDE3BQ13370 1112 aa18.73■□□□□ 0.59
PTPN7-216ENST00000492977 POLR3AO14802 1390 aaPredicted RBP18.73■□□□□ 0.59
PTPN7-216ENST00000492977 WASLO00401 505 aaPredicted RBP18.72■□□□□ 0.59
PTPN7-216ENST00000492977 HDGFL2Q7Z4V5 671 aaPredicted RBP18.72■□□□□ 0.59
PTPN7-216ENST00000492977 ADAMTSL3P82987 1691 aa18.72■□□□□ 0.59
PTPN7-216ENST00000492977 CD163L1Q9NR16 1453 aa18.72■□□□□ 0.59
PTPN7-216ENST00000492977 TBX22Q9Y458 520 aa18.72■□□□□ 0.59
PTPN7-216ENST00000492977 CABP1Q9NZU7 370 aa18.7■□□□□ 0.58
PTPN7-216ENST00000492977 ATP7BP35670 1465 aa18.7■□□□□ 0.58
PTPN7-216ENST00000492977 DIP2AQ14689 1571 aa18.7■□□□□ 0.58
PTPN7-216ENST00000492977 CEP170BQ9Y4F5 1589 aaPredicted RBP18.7■□□□□ 0.58
PTPN7-216ENST00000492977 ROBO2Q9HCK4 1378 aa18.68■□□□□ 0.58
PTPN7-216ENST00000492977 ERICH6BQ5W0A0 696 aa18.67■□□□□ 0.58
PTPN7-216ENST00000492977 SLC26A8Q96RN1 970 aa18.67■□□□□ 0.58
PTPN7-216ENST00000492977 SETD1BQ9UPS6 1966 aaKnown RBP18.66■□□□□ 0.58
PTPN7-216ENST00000492977 ANKRD26Q9UPS8 1709 aa18.66■□□□□ 0.58
PTPN7-216ENST00000492977 SENP3-EIF4A1A0A087X0R7 540 aa18.65■□□□□ 0.58
PTPN7-216ENST00000492977 FYB1O15117 783 aa18.65■□□□□ 0.58
PTPN7-216ENST00000492977 ADGRB2O60241 1585 aa18.65■□□□□ 0.58
PTPN7-216ENST00000492977 PTPRUQ92729 1446 aa18.64■□□□□ 0.58
PTPN7-216ENST00000492977 TNNT2P45379 298 aaPredicted RBP18.64■□□□□ 0.58
PTPN7-216ENST00000492977 CFAP53Q96M91 514 aa18.64■□□□□ 0.58
PTPN7-216ENST00000492977 MTHFSP49914 203 aa18.64■□□□□ 0.57
PTPN7-216ENST00000492977 NUDT16Q96DE0 195 aaKnown RBP18.64■□□□□ 0.57
PTPN7-216ENST00000492977 CCDC61Q9Y6R9 512 aa18.64■□□□□ 0.57
PTPN7-216ENST00000492977 ZNF142P52746 1687 aaPredicted RBP18.63■□□□□ 0.57
PTPN7-216ENST00000492977 CPSF1Q10570 1443 aaKnown RBP18.63■□□□□ 0.57
PTPN7-216ENST00000492977 PPIP5K1Q6PFW1 1433 aa18.63■□□□□ 0.57
PTPN7-216ENST00000492977 NGEFQ8N5V2 710 aa18.63■□□□□ 0.57
PTPN7-216ENST00000492977 AMOTL2Q9Y2J4 779 aa18.63■□□□□ 0.57
PTPN7-216ENST00000492977 SALL2Q9Y467 1007 aaPredicted RBP18.63■□□□□ 0.57
PTPN7-216ENST00000492977 PTCH1Q13635 1447 aa18.62■□□□□ 0.57
PTPN7-216ENST00000492977 DCAF8L1A6NGE4 600 aa18.62■□□□□ 0.57
PTPN7-216ENST00000492977 PIK3R4Q99570 1358 aa18.62■□□□□ 0.57
PTPN7-216ENST00000492977 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.61■□□□□ 0.57
PTPN7-216ENST00000492977 KIF20BQ96Q89 1820 aa18.61■□□□□ 0.57
PTPN7-216ENST00000492977 GGNBP2Q9H3C7 697 aa18.61■□□□□ 0.57
PTPN7-216ENST00000492977 RNF123Q5XPI4 1314 aa18.61■□□□□ 0.57
PTPN7-216ENST00000492977 SHPRHQ149N8 1683 aa18.6■□□□□ 0.57
PTPN7-216ENST00000492977 ANKLE2Q86XL3 938 aa18.59■□□□□ 0.57
PTPN7-216ENST00000492977 RTN4Q9NQC3 1192 aaKnown RBP18.59■□□□□ 0.57
PTPN7-216ENST00000492977 EDC4Q6P2E9 1401 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms