RNA–Protein interactions for RNA: ENST00000492779.5

RBM39-237, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-237ENST00000492779 RNF123Q5XPI4 1314 aa8.9□□□□□ -0.99
RBM39-237ENST00000492779 ADAMTS13Q76LX8 1427 aa8.9□□□□□ -0.99
RBM39-237ENST00000492779 ST20-MTHFSA0A0A6YYL1 179 aa8.89□□□□□ -0.99
RBM39-237ENST00000492779 ARHGAP23Q9P227 1491 aa8.89□□□□□ -0.99
RBM39-237ENST00000492779 NBR1Q14596 966 aa8.89□□□□□ -0.99
RBM39-237ENST00000492779 IFT172Q9UG01 1749 aa8.89□□□□□ -0.99
RBM39-237ENST00000492779 SCAF11Q99590 1463 aaKnown RBP8.89□□□□□ -0.99
RBM39-237ENST00000492779 SMG6Q86US8 1419 aaKnown RBP8.88□□□□□ -0.99
RBM39-237ENST00000492779 SLIT1O75093 1534 aa8.88□□□□□ -0.99
RBM39-237ENST00000492779 NRXN1Q9ULB1 1477 aa8.88□□□□□ -0.99
RBM39-237ENST00000492779 PLEKHH1Q9ULM0 1364 aa8.88□□□□□ -0.99
RBM39-237ENST00000492779 NRXN3Q9Y4C0 1643 aa8.88□□□□□ -0.99
RBM39-237ENST00000492779 ASXL1Q8IXJ9 1541 aa8.88□□□□□ -0.99
RBM39-237ENST00000492779 NUTM2FA1L443 756 aa8.87□□□□□ -0.99
RBM39-237ENST00000492779 KCNA6P17658 529 aa8.87□□□□□ -0.99
RBM39-237ENST00000492779 C14orf37Q86TY3 774 aa8.87□□□□□ -0.99
RBM39-237ENST00000492779 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.87□□□□□ -0.99
RBM39-237ENST00000492779 UBE2Q2Q8WVN8 375 aa8.87□□□□□ -0.99
RBM39-237ENST00000492779 PTPRUQ92729 1446 aa8.87□□□□□ -0.99
RBM39-237ENST00000492779 MYOM2P54296 1465 aa8.87□□□□□ -0.99
RBM39-237ENST00000492779 CDCA7LQ96GN5 454 aa8.87□□□□□ -0.99
RBM39-237ENST00000492779 NUDCQ9Y266 331 aa8.87□□□□□ -0.99
RBM39-237ENST00000492779 AMOTL2Q9Y2J4 779 aa8.87□□□□□ -0.99
RBM39-237ENST00000492779 IQGAP1P46940 1657 aa8.87□□□□□ -0.99
RBM39-237ENST00000492779 NEURL4Q96JN8 1562 aa8.87□□□□□ -0.99
RBM39-237ENST00000492779 ZNF335Q9H4Z2 1342 aaPredicted RBP8.87□□□□□ -0.99
RBM39-237ENST00000492779 ALKQ9UM73 1620 aa8.86□□□□□ -0.99
RBM39-237ENST00000492779 ZNF142P52746 1687 aaPredicted RBP8.86□□□□□ -0.99
RBM39-237ENST00000492779 PRAM1Q96QH2 718 aa8.86□□□□□ -0.99
RBM39-237ENST00000492779 PLEKHG1Q9ULL1 1385 aa8.86□□□□□ -0.99
RBM39-237ENST00000492779 NPHP4O75161 1426 aaPredicted RBP8.86□□□□□ -0.99
RBM39-237ENST00000492779 HDGFP51858 240 aaKnown RBP8.86□□□□□ -0.99
RBM39-237ENST00000492779 EXOC6Q8TAG9 804 aa8.86□□□□□ -0.99
RBM39-237ENST00000492779 STRCQ7RTU9 1775 aa8.85□□□□□ -0.99
RBM39-237ENST00000492779 DEKP35659 375 aaKnown RBP8.85□□□□□ -0.99
RBM39-237ENST00000492779 TRPM1Q7Z4N2 1603 aa8.85□□□□□ -0.99
RBM39-237ENST00000492779 ROBO2Q9HCK4 1378 aa8.85□□□□□ -0.99
RBM39-237ENST00000492779 ADGRB1O14514 1584 aa8.85□□□□□ -0.99
RBM39-237ENST00000492779 FOXD4L1Q9NU39 408 aa8.85□□□□□ -0.99
RBM39-237ENST00000492779 RALGAPBQ86X10 1494 aa8.85□□□□□ -0.99
RBM39-237ENST00000492779 MINK1Q8N4C8 1332 aaPredicted RBP8.84□□□□□ -0.99
RBM39-237ENST00000492779 PLIN1O60240 522 aa8.84□□□□□ -0.99
RBM39-237ENST00000492779 ERICH6BQ5W0A0 696 aa8.84□□□□□ -0.99
RBM39-237ENST00000492779 TBX22Q9Y458 520 aa8.83□□□□□ -1
RBM39-237ENST00000492779 YTHDC2Q9H6S0 1430 aaKnown RBP8.83□□□□□ -1
RBM39-237ENST00000492779 TESK2Q96S53 571 aa8.83□□□□□ -1
RBM39-237ENST00000492779 LRPPRCP42704 1394 aaKnown RBP8.83□□□□□ -1
RBM39-237ENST00000492779 MED14O60244 1454 aa8.83□□□□□ -1
RBM39-237ENST00000492779 CCDC136Q96JN2 1154 aa8.82□□□□□ -1
RBM39-237ENST00000492779 KDM5AP29375 1690 aaKnown RBP8.82□□□□□ -1
RBM39-237ENST00000492779 POGKQ9P215 609 aa8.82□□□□□ -1
RBM39-237ENST00000492779 NOP58Q9Y2X3 529 aaKnown RBP8.82□□□□□ -1
RBM39-237ENST00000492779 GPRASP1Q5JY77 1395 aa8.82□□□□□ -1
RBM39-237ENST00000492779 SETBP1Q9Y6X0 1596 aa8.81□□□□□ -1
RBM39-237ENST00000492779 SETD1AO15047 1707 aaKnown RBP8.81□□□□□ -1
RBM39-237ENST00000492779 DISP3Q9P2K9 1392 aa8.81□□□□□ -1
RBM39-237ENST00000492779 TMC1Q8TDI8 760 aa8.81□□□□□ -1
RBM39-237ENST00000492779 STAC3Q96MF2 364 aa8.81□□□□□ -1
RBM39-237ENST00000492779 CABP2Q9NPB3 220 aa8.81□□□□□ -1
RBM39-237ENST00000492779 PER1O15534 1290 aaPredicted RBP8.8□□□□□ -1
RBM39-237ENST00000492779 C20orf194Q5TEA3 1177 aa8.8□□□□□ -1
RBM39-237ENST00000492779 NPM2Q86SE8 214 aaKnown RBP8.8□□□□□ -1
RBM39-237ENST00000492779 CENPJQ9HC77 1338 aaPredicted RBP8.79□□□□□ -1
RBM39-237ENST00000492779 PROSER2Q86WR7 435 aaPredicted RBP8.79□□□□□ -1
RBM39-237ENST00000492779 STRCP1A6NGW2 1772 aa8.78□□□□□ -1
RBM39-237ENST00000492779 ABCC11Q96J66 1382 aa8.78□□□□□ -1
RBM39-237ENST00000492779 RRP1P56182 461 aaKnown RBP8.78□□□□□ -1
RBM39-237ENST00000492779 ANO8Q9HCE9 1232 aaPredicted RBP8.78□□□□□ -1
RBM39-237ENST00000492779 CC2D1BQ5T0F9 858 aaKnown RBP8.77□□□□□ -1
RBM39-237ENST00000492779 IPO9Q96P70 1041 aaKnown RBP8.77□□□□□ -1.01
RBM39-237ENST00000492779 TMEM94Q12767 1356 aa8.77□□□□□ -1.01
RBM39-237ENST00000492779 SRPK2P78362 688 aaKnown RBP8.76□□□□□ -1.01
RBM39-237ENST00000492779 CDK19Q9BWU1 502 aa8.76□□□□□ -1.01
RBM39-237ENST00000492779 DDX17Q92841 729 aaKnown RBP8.76□□□□□ -1.01
RBM39-237ENST00000492779 SLC12A5Q9H2X9 1139 aa8.76□□□□□ -1.01
RBM39-237ENST00000492779 LAS1LQ9Y4W2 734 aaKnown RBP8.75□□□□□ -1.01
RBM39-237ENST00000492779 ARHGEF28Q8N1W1 1705 aaKnown RBP8.75□□□□□ -1.01
RBM39-237ENST00000492779 MYBBP1AQ9BQG0 1328 aaKnown RBP8.75□□□□□ -1.01
RBM39-237ENST00000492779 PRR36Q9H6K5 1346 aa8.75□□□□□ -1.01
RBM39-237ENST00000492779 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.75□□□□□ -1.01
RBM39-237ENST00000492779 IL27Q8NEV9 243 aa8.75□□□□□ -1.01
RBM39-237ENST00000492779 PMFBP1Q8TBY8 1022 aa8.75□□□□□ -1.01
RBM39-237ENST00000492779 PARD3Q8TEW0 1356 aa8.75□□□□□ -1.01
RBM39-237ENST00000492779 KIAA1210Q9ULL0 1709 aa8.74□□□□□ -1.01
RBM39-237ENST00000492779 CHD2O14647 1828 aaKnown RBP8.74□□□□□ -1.01
RBM39-237ENST00000492779 PLEKHG5O94827 1062 aa8.74□□□□□ -1.01
RBM39-237ENST00000492779 SLC4A3P48751 1232 aa8.74□□□□□ -1.01
RBM39-237ENST00000492779 RCAN3Q9UKA8 241 aa8.74□□□□□ -1.01
RBM39-237ENST00000492779 XPCQ01831 940 aaPredicted RBP8.74□□□□□ -1.01
RBM39-237ENST00000492779 ORAI2Q96SN7 254 aa8.74□□□□□ -1.01
RBM39-237ENST00000492779 WASLO00401 505 aaPredicted RBP8.73□□□□□ -1.01
RBM39-237ENST00000492779 PDE4AP27815 886 aa8.73□□□□□ -1.01
RBM39-237ENST00000492779 CABP1Q9NZU7 370 aa8.73□□□□□ -1.01
RBM39-237ENST00000492779 TULP4Q9NRJ4 1543 aa8.73□□□□□ -1.01
RBM39-237ENST00000492779 TECPR2O15040 1411 aa8.73□□□□□ -1.01
RBM39-237ENST00000492779 BRD4O60885 1362 aaPredicted RBP8.73□□□□□ -1.01
RBM39-237ENST00000492779 LAMC1P11047 1609 aa8.73□□□□□ -1.01
RBM39-237ENST00000492779 TMF1P82094 1093 aa8.72□□□□□ -1.01
RBM39-237ENST00000492779 CRBNQ96SW2 442 aa8.72□□□□□ -1.01
RBM39-237ENST00000492779 DMRT2Q9Y5R5 561 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms