RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 CAMSAP1Q5T5Y3 1602 aa20.97■□□□□ 0.95
SEMA4D-220ENST00000492386 TMEM132EQ6IEE7 984 aa20.96■□□□□ 0.95
SEMA4D-220ENST00000492386 C8orf34Q49A92 452 aa20.96■□□□□ 0.95
SEMA4D-220ENST00000492386 FAM161AQ3B820 660 aa20.95■□□□□ 0.94
SEMA4D-220ENST00000492386 LAS1LQ9Y4W2 734 aaKnown RBP20.95■□□□□ 0.94
SEMA4D-220ENST00000492386 IQSEC2Q5JU85 1478 aa20.95■□□□□ 0.94
SEMA4D-220ENST00000492386 GLI2P10070 1586 aa20.95■□□□□ 0.94
SEMA4D-220ENST00000492386 PIK3C2BO00750 1634 aa20.95■□□□□ 0.94
SEMA4D-220ENST00000492386 ARHGEF28Q8N1W1 1705 aaKnown RBP20.94■□□□□ 0.94
SEMA4D-220ENST00000492386 NPM1P06748 294 aaKnown RBP eCLIP20.94■□□□□ 0.94
SEMA4D-220ENST00000492386 TNNT2P45379 298 aaPredicted RBP20.92■□□□□ 0.94
SEMA4D-220ENST00000492386 PDE3AQ14432 1141 aa20.92■□□□□ 0.94
SEMA4D-220ENST00000492386 NINLQ9Y2I6 1382 aa20.92■□□□□ 0.94
SEMA4D-220ENST00000492386 RUNDC1Q96C34 613 aa20.92■□□□□ 0.94
SEMA4D-220ENST00000492386 NEXMIFQ5QGS0 1516 aa20.91■□□□□ 0.94
SEMA4D-220ENST00000492386 TULP4Q9NRJ4 1543 aa20.91■□□□□ 0.94
SEMA4D-220ENST00000492386 PHF23Q9BUL5 403 aaPredicted RBP20.91■□□□□ 0.94
SEMA4D-220ENST00000492386 CGNL1Q0VF96 1302 aa20.9■□□□□ 0.94
SEMA4D-220ENST00000492386 USP35Q9P2H5 1018 aa20.9■□□□□ 0.94
SEMA4D-220ENST00000492386 PPM1GO15355 546 aaPredicted RBP20.89■□□□□ 0.93
SEMA4D-220ENST00000492386 RGS3P49796 1198 aa20.89■□□□□ 0.93
SEMA4D-220ENST00000492386 PUS7Q96PZ0 661 aaKnown RBP20.89■□□□□ 0.93
SEMA4D-220ENST00000492386 IGHDP01880 384 aa20.88■□□□□ 0.93
SEMA4D-220ENST00000492386 NEFMP07197 916 aa20.88■□□□□ 0.93
SEMA4D-220ENST00000492386 TCP11L2Q8N4U5 519 aa20.88■□□□□ 0.93
SEMA4D-220ENST00000492386 VIRMAQ69YN4 1812 aaKnown RBP20.88■□□□□ 0.93
SEMA4D-220ENST00000492386 RRP7AQ9Y3A4 280 aaKnown RBP20.88■□□□□ 0.93
SEMA4D-220ENST00000492386 MTHFSP49914 203 aa20.87■□□□□ 0.93
SEMA4D-220ENST00000492386 NEUROD2Q15784 382 aa20.86■□□□□ 0.93
SEMA4D-220ENST00000492386 PANK1Q8TE04 598 aa20.86■□□□□ 0.93
SEMA4D-220ENST00000492386 ANKRD36BQ8N2N9 1353 aa20.86■□□□□ 0.93
SEMA4D-220ENST00000492386 DIP2CQ9Y2E4 1556 aa20.86■□□□□ 0.93
SEMA4D-220ENST00000492386 EVC2Q86UK5 1308 aa20.85■□□□□ 0.93
SEMA4D-220ENST00000492386 NUTM2DQ5VT03 806 aaPredicted RBP20.85■□□□□ 0.93
SEMA4D-220ENST00000492386 WDR63Q8IWG1 891 aa20.85■□□□□ 0.93
SEMA4D-220ENST00000492386 CLUAP1Q96AJ1 413 aa20.85■□□□□ 0.93
SEMA4D-220ENST00000492386 NEO1Q92859 1461 aa20.85■□□□□ 0.93
SEMA4D-220ENST00000492386 NSD2O96028 1365 aa20.84■□□□□ 0.93
SEMA4D-220ENST00000492386 VGFO15240 615 aaPredicted RBP20.84■□□□□ 0.93
SEMA4D-220ENST00000492386 RARSP54136 660 aaKnown RBP20.84■□□□□ 0.93
SEMA4D-220ENST00000492386 COG6Q9Y2V7 657 aa20.84■□□□□ 0.93
SEMA4D-220ENST00000492386 CANXP27824 592 aaKnown RBP20.83■□□□□ 0.93
SEMA4D-220ENST00000492386 CCDC27Q2M243 656 aa20.83■□□□□ 0.93
SEMA4D-220ENST00000492386 CFAP53Q96M91 514 aa20.83■□□□□ 0.93
SEMA4D-220ENST00000492386 RAPGEF3O95398 923 aa20.82■□□□□ 0.92
SEMA4D-220ENST00000492386 ARHGAP31Q2M1Z3 1444 aa20.82■□□□□ 0.92
SEMA4D-220ENST00000492386 SLC4A3P48751 1232 aa20.81■□□□□ 0.92
SEMA4D-220ENST00000492386 ADGRB2O60241 1585 aa20.81■□□□□ 0.92
SEMA4D-220ENST00000492386 OSCARQ8IYS5 282 aa20.8■□□□□ 0.92
SEMA4D-220ENST00000492386 FRAT1Q92837 279 aaPredicted RBP20.8■□□□□ 0.92
SEMA4D-220ENST00000492386 ZFYVE9O95405 1425 aa20.79■□□□□ 0.92
SEMA4D-220ENST00000492386 MYO5BQ9ULV0 1848 aa20.79■□□□□ 0.92
SEMA4D-220ENST00000492386 RICTORQ6R327 1708 aa20.79■□□□□ 0.92
SEMA4D-220ENST00000492386 NCBP3Q53F19 620 aaKnown RBP20.79■□□□□ 0.92
SEMA4D-220ENST00000492386 CABP2Q9NPB3 220 aa20.79■□□□□ 0.92
SEMA4D-220ENST00000492386 IDI1Q13907 227 aa20.78■□□□□ 0.92
SEMA4D-220ENST00000492386 RLBP1P12271 317 aa20.77■□□□□ 0.91
SEMA4D-220ENST00000492386 MAPK8IP3Q9UPT6 1336 aa20.76■□□□□ 0.91
SEMA4D-220ENST00000492386 AAMPQ13685 434 aa20.76■□□□□ 0.91
SEMA4D-220ENST00000492386 ABCC11Q96J66 1382 aa20.76■□□□□ 0.91
SEMA4D-220ENST00000492386 DAXXQ9UER7 740 aaPredicted RBP20.75■□□□□ 0.91
SEMA4D-220ENST00000492386 TNNQ9UQP3 1299 aa20.75■□□□□ 0.91
SEMA4D-220ENST00000492386 A0A1W2PP64 1363 aa20.75■□□□□ 0.91
SEMA4D-220ENST00000492386 U2AF1L5P0DN76 240 aaPredicted RBP20.75■□□□□ 0.91
SEMA4D-220ENST00000492386 U2AF1Q01081 240 aaKnown RBP eCLIP20.75■□□□□ 0.91
SEMA4D-220ENST00000492386 SAFB2Q14151 953 aaKnown RBP eCLIP20.74■□□□□ 0.91
SEMA4D-220ENST00000492386 TMEM131LA2VDJ0 1609 aa20.74■□□□□ 0.91
SEMA4D-220ENST00000492386 USP19O94966 1318 aa20.74■□□□□ 0.91
SEMA4D-220ENST00000492386 PREX1Q8TCU6 1659 aa20.73■□□□□ 0.91
SEMA4D-220ENST00000492386 MYH16Q9H6N6 1097 aa20.73■□□□□ 0.91
SEMA4D-220ENST00000492386 PTPRMP28827 1452 aa20.73■□□□□ 0.91
SEMA4D-220ENST00000492386 ANKRD26Q9UPS8 1709 aa20.73■□□□□ 0.91
SEMA4D-220ENST00000492386 BCL2L13Q9BXK5 485 aa20.73■□□□□ 0.91
SEMA4D-220ENST00000492386 PCDHB15Q9Y5E8 787 aa20.73■□□□□ 0.91
SEMA4D-220ENST00000492386 COL3A1P02461 1466 aaPredicted RBP20.72■□□□□ 0.91
SEMA4D-220ENST00000492386 NFKBIBQ15653 356 aa20.72■□□□□ 0.91
SEMA4D-220ENST00000492386 SLC52A1Q9NWF4 448 aa20.72■□□□□ 0.91
SEMA4D-220ENST00000492386 CLTCQ00610 1675 aaKnown RBP20.71■□□□□ 0.91
SEMA4D-220ENST00000492386 PMFBP1Q8TBY8 1022 aa20.71■□□□□ 0.91
SEMA4D-220ENST00000492386 YEATS2Q9ULM3 1422 aa20.71■□□□□ 0.91
SEMA4D-220ENST00000492386 STK26Q9P289 416 aa20.71■□□□□ 0.91
SEMA4D-220ENST00000492386 PLEKHF1Q96S99 279 aa20.69■□□□□ 0.9
SEMA4D-220ENST00000492386 CD163L1Q9NR16 1453 aa20.69■□□□□ 0.9
SEMA4D-220ENST00000492386 SRPK2P78362 688 aaKnown RBP20.68■□□□□ 0.9
SEMA4D-220ENST00000492386 SEC24BO95487 1268 aa20.68■□□□□ 0.9
SEMA4D-220ENST00000492386 MED14O60244 1454 aa20.68■□□□□ 0.9
SEMA4D-220ENST00000492386 NLRP1Q9C000 1473 aa20.68■□□□□ 0.9
SEMA4D-220ENST00000492386 GGNBP2Q9H3C7 697 aa20.67■□□□□ 0.9
SEMA4D-220ENST00000492386 ATAD2Q6PL18 1390 aa20.67■□□□□ 0.9
SEMA4D-220ENST00000492386 ZMYM3Q14202 1370 aa20.66■□□□□ 0.9
SEMA4D-220ENST00000492386 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
SEMA4D-220ENST00000492386 YTHDC2Q9H6S0 1430 aaKnown RBP20.65■□□□□ 0.9
SEMA4D-220ENST00000492386 CT47B1P0C2W7 299 aaPredicted RBP20.65■□□□□ 0.9
SEMA4D-220ENST00000492386 FYB1O15117 783 aa20.65■□□□□ 0.9
SEMA4D-220ENST00000492386 MVPQ14764 893 aaKnown RBP20.65■□□□□ 0.9
SEMA4D-220ENST00000492386 MINK1Q8N4C8 1332 aaPredicted RBP20.64■□□□□ 0.9
SEMA4D-220ENST00000492386 TMPOP42166 694 aaKnown RBP20.64■□□□□ 0.89
SEMA4D-220ENST00000492386 TSR2Q969E8 191 aaKnown RBP20.64■□□□□ 0.89
SEMA4D-220ENST00000492386 PRAM1Q96QH2 718 aa20.64■□□□□ 0.89
SEMA4D-220ENST00000492386 TRIM35Q9UPQ4 493 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms