RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 LRPPRCP42704 1394 aaKnown RBP22.77■■□□□ 1.24
MRPL55-231ENST00000492170 C8orf37Q96NL8 207 aa22.77■■□□□ 1.24
MRPL55-231ENST00000492170 PIK3C2GO75747 1445 aa22.76■■□□□ 1.23
MRPL55-231ENST00000492170 STK26Q9P289 416 aa22.76■■□□□ 1.23
MRPL55-231ENST00000492170 CDK12Q9NYV4 1490 aaPredicted RBP22.74■■□□□ 1.23
MRPL55-231ENST00000492170 ABCC11Q96J66 1382 aa22.74■■□□□ 1.23
MRPL55-231ENST00000492170 ESCO1Q5FWF5 840 aa22.73■■□□□ 1.23
MRPL55-231ENST00000492170 KNDC1Q76NI1 1749 aa22.73■■□□□ 1.23
MRPL55-231ENST00000492170 NPHP3Q7Z494 1330 aa22.72■■□□□ 1.23
MRPL55-231ENST00000492170 ADAMTS2O95450 1211 aa22.71■■□□□ 1.23
MRPL55-231ENST00000492170 TMEM132EQ6IEE7 984 aa22.71■■□□□ 1.23
MRPL55-231ENST00000492170 WAPLQ7Z5K2 1190 aa22.71■■□□□ 1.23
MRPL55-231ENST00000492170 YTHDC2Q9H6S0 1430 aaKnown RBP22.7■■□□□ 1.22
MRPL55-231ENST00000492170 NGLY1Q96IV0 654 aa22.69■■□□□ 1.22
MRPL55-231ENST00000492170 RAB3GAP2Q9H2M9 1393 aa22.68■■□□□ 1.22
MRPL55-231ENST00000492170 PLEKHH1Q9ULM0 1364 aa22.68■■□□□ 1.22
MRPL55-231ENST00000492170 QTRT2Q9H974 415 aaKnown RBP22.68■■□□□ 1.22
MRPL55-231ENST00000492170 MYOM2P54296 1465 aa22.67■■□□□ 1.22
MRPL55-231ENST00000492170 RBM6P78332 1123 aaKnown RBP22.67■■□□□ 1.22
MRPL55-231ENST00000492170 UPF1Q92900 1129 aaKnown RBP eCLIP22.67■■□□□ 1.22
MRPL55-231ENST00000492170 COL22A1Q8NFW1 1626 aaPredicted RBP22.67■■□□□ 1.22
MRPL55-231ENST00000492170 NRXN1Q9ULB1 1477 aa22.66■■□□□ 1.22
MRPL55-231ENST00000492170 NUTM2FA1L443 756 aa22.66■■□□□ 1.22
MRPL55-231ENST00000492170 PXDNQ92626 1479 aa22.66■■□□□ 1.22
MRPL55-231ENST00000492170 C14orf93Q9H972 538 aaKnown RBP22.65■■□□□ 1.22
MRPL55-231ENST00000492170 FOXO3O43524 673 aa22.64■■□□□ 1.21
MRPL55-231ENST00000492170 RGS12O14924 1447 aa22.64■■□□□ 1.21
MRPL55-231ENST00000492170 DHX57Q6P158 1386 aaKnown RBP22.63■■□□□ 1.21
MRPL55-231ENST00000492170 SIRT1Q96EB6 747 aa22.63■■□□□ 1.21
MRPL55-231ENST00000492170 FMN2Q9NZ56 1722 aa22.62■■□□□ 1.21
MRPL55-231ENST00000492170 XPCQ01831 940 aaPredicted RBP22.62■■□□□ 1.21
MRPL55-231ENST00000492170 CFAP70Q5T0N1 1121 aa22.61■■□□□ 1.21
MRPL55-231ENST00000492170 USP21Q9UK80 565 aa22.61■■□□□ 1.21
MRPL55-231ENST00000492170 KIF1AQ12756 1690 aa22.6■■□□□ 1.21
MRPL55-231ENST00000492170 FNBP4Q8N3X1 1017 aaPredicted RBP22.59■■□□□ 1.21
MRPL55-231ENST00000492170 TRPC5Q9UL62 973 aaPredicted RBP22.59■■□□□ 1.21
MRPL55-231ENST00000492170 ATRNO75882 1429 aa22.56■■□□□ 1.2
MRPL55-231ENST00000492170 PRAM1Q96QH2 718 aa22.55■■□□□ 1.2
MRPL55-231ENST00000492170 DLC1Q96QB1 1528 aa22.54■■□□□ 1.2
MRPL55-231ENST00000492170 SPATA31A3Q5VYP0 1347 aa22.54■■□□□ 1.2
MRPL55-231ENST00000492170 SAFB2Q14151 953 aaKnown RBP eCLIP22.53■■□□□ 1.2
MRPL55-231ENST00000492170 POGKQ9P215 609 aa22.53■■□□□ 1.2
MRPL55-231ENST00000492170 MARF1Q9Y4F3 1742 aaKnown RBP22.52■■□□□ 1.2
MRPL55-231ENST00000492170 KRT28Q7Z3Y7 464 aa22.52■■□□□ 1.2
MRPL55-231ENST00000492170 PHF8Q9UPP1 1060 aa22.52■■□□□ 1.2
MRPL55-231ENST00000492170 ADGRB1O14514 1584 aa22.5■■□□□ 1.19
MRPL55-231ENST00000492170 ATAD2Q6PL18 1390 aa22.5■■□□□ 1.19
MRPL55-231ENST00000492170 TNS3Q68CZ2 1445 aa22.49■■□□□ 1.19
MRPL55-231ENST00000492170 BCL9LQ86UU0 1499 aa22.49■■□□□ 1.19
MRPL55-231ENST00000492170 HRCP23327 699 aa22.49■■□□□ 1.19
MRPL55-231ENST00000492170 PSME1Q06323 249 aa22.49■■□□□ 1.19
MRPL55-231ENST00000492170 ANKARQ7Z5J8 1434 aa22.48■■□□□ 1.19
MRPL55-231ENST00000492170 ADGRB2O60241 1585 aa22.48■■□□□ 1.19
MRPL55-231ENST00000492170 RGPD8O14715 1765 aaPredicted RBP22.48■■□□□ 1.19
MRPL55-231ENST00000492170 DCAF11Q8TEB1 546 aa22.47■■□□□ 1.19
MRPL55-231ENST00000492170 STAC3Q96MF2 364 aa22.47■■□□□ 1.19
MRPL55-231ENST00000492170 KDM2AQ9Y2K7 1162 aa22.47■■□□□ 1.19
MRPL55-231ENST00000492170 TRAK1Q9UPV9 953 aa22.46■■□□□ 1.19
MRPL55-231ENST00000492170 USP32Q8NFA0 1604 aa22.46■■□□□ 1.19
MRPL55-231ENST00000492170 HAP1P54257 671 aaPredicted RBP22.45■■□□□ 1.18
MRPL55-231ENST00000492170 SBNO1A3KN83 1393 aa22.45■■□□□ 1.18
MRPL55-231ENST00000492170 EIF3AQ14152 1382 aaKnown RBP22.44■■□□□ 1.18
MRPL55-231ENST00000492170 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.44■■□□□ 1.18
MRPL55-231ENST00000492170 SLIT2O94813 1529 aa22.43■■□□□ 1.18
MRPL55-231ENST00000492170 ARHGEF10O15013 1369 aa22.43■■□□□ 1.18
MRPL55-231ENST00000492170 UNC5CLQ8IV45 518 aa22.43■■□□□ 1.18
MRPL55-231ENST00000492170 GJD4Q96KN9 370 aaPredicted RBP22.43■■□□□ 1.18
MRPL55-231ENST00000492170 HIRIP3Q9BW71 556 aaPredicted RBP22.42■■□□□ 1.18
MRPL55-231ENST00000492170 LMOD2Q6P5Q4 547 aa22.41■■□□□ 1.18
MRPL55-231ENST00000492170 PMFBP1Q8TBY8 1022 aa22.41■■□□□ 1.18
MRPL55-231ENST00000492170 MINK1Q8N4C8 1332 aaPredicted RBP22.4■■□□□ 1.18
MRPL55-231ENST00000492170 TULP4Q9NRJ4 1543 aa22.39■■□□□ 1.17
MRPL55-231ENST00000492170 PLEKHG5O94827 1062 aa22.38■■□□□ 1.17
MRPL55-231ENST00000492170 CABLES1Q8TDN4 633 aa22.38■■□□□ 1.17
MRPL55-231ENST00000492170 RALGAPBQ86X10 1494 aa22.38■■□□□ 1.17
MRPL55-231ENST00000492170 EP400Q96L91 3159 aa22.37■■□□□ 1.17
MRPL55-231ENST00000492170 GPRASP1Q5JY77 1395 aa22.37■■□□□ 1.17
MRPL55-231ENST00000492170 WASLO00401 505 aaPredicted RBP22.36■■□□□ 1.17
MRPL55-231ENST00000492170 ABCA3Q99758 1704 aa22.36■■□□□ 1.17
MRPL55-231ENST00000492170 PRR36Q9H6K5 1346 aa22.35■■□□□ 1.17
MRPL55-231ENST00000492170 GLI3P10071 1580 aa22.35■■□□□ 1.17
MRPL55-231ENST00000492170 PLCH1Q4KWH8 1693 aa22.33■■□□□ 1.17
MRPL55-231ENST00000492170 ARHGEF28Q8N1W1 1705 aaKnown RBP22.33■■□□□ 1.17
MRPL55-231ENST00000492170 TRPM3Q9HCF6 1732 aaPredicted RBP22.33■■□□□ 1.17
MRPL55-231ENST00000492170 NWD2Q9ULI1 1742 aa22.33■■□□□ 1.17
MRPL55-231ENST00000492170 VPS72Q15906 364 aa22.32■■□□□ 1.16
MRPL55-231ENST00000492170 CCDC125Q86Z20 511 aa22.31■■□□□ 1.16
MRPL55-231ENST00000492170 NGDNQ8NEJ9 315 aaKnown RBP22.3■■□□□ 1.16
MRPL55-231ENST00000492170 CCDC9Q9Y3X0 531 aaKnown RBP22.3■■□□□ 1.16
MRPL55-231ENST00000492170 ALS2Q96Q42 1657 aa22.29■■□□□ 1.16
MRPL55-231ENST00000492170 ATP7BP35670 1465 aa22.28■■□□□ 1.16
MRPL55-231ENST00000492170 FAM83GA6ND36 823 aa22.27■■□□□ 1.16
MRPL55-231ENST00000492170 ITSN1Q15811 1721 aa22.27■■□□□ 1.16
MRPL55-231ENST00000492170 KIAA1210Q9ULL0 1709 aa22.26■■□□□ 1.15
MRPL55-231ENST00000492170 SEPT12Q8IYM1 358 aa22.26■■□□□ 1.15
MRPL55-231ENST00000492170 PAK3O75914 559 aaPredicted RBP22.25■■□□□ 1.15
MRPL55-231ENST00000492170 NUDT16Q96DE0 195 aaKnown RBP22.25■■□□□ 1.15
MRPL55-231ENST00000492170 BLMP54132 1417 aaPredicted RBP22.23■■□□□ 1.15
MRPL55-231ENST00000492170 COL14A1Q05707 1796 aaKnown RBP22.23■■□□□ 1.15
MRPL55-231ENST00000492170 NRAPQ86VF7 1730 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms