RNA–Protein interactions for RNA: ENST00000492016.5

NELFCD-211, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-211ENST00000492016 DCCP43146 1447 aa22.29■■□□□ 1.16
NELFCD-211ENST00000492016 MSH6P52701 1360 aa22.27■■□□□ 1.16
NELFCD-211ENST00000492016 ST20-MTHFSA0A0A6YYL1 179 aa22.26■■□□□ 1.15
NELFCD-211ENST00000492016 C14orf37Q86TY3 774 aa22.26■■□□□ 1.15
NELFCD-211ENST00000492016 ADGRB2O60241 1585 aa22.25■■□□□ 1.15
NELFCD-211ENST00000492016 CERKQ8TCT0 537 aa22.25■■□□□ 1.15
NELFCD-211ENST00000492016 SAFB2Q14151 953 aaKnown RBP eCLIP22.24■■□□□ 1.15
NELFCD-211ENST00000492016 RBM33Q96EV2 1170 aaKnown RBP22.24■■□□□ 1.15
NELFCD-211ENST00000492016 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.23■■□□□ 1.15
NELFCD-211ENST00000492016 HSPA5P11021 654 aaKnown RBP22.23■■□□□ 1.15
NELFCD-211ENST00000492016 TESK2Q96S53 571 aa22.23■■□□□ 1.15
NELFCD-211ENST00000492016 CDC42BPGQ6DT37 1551 aa22.22■■□□□ 1.15
NELFCD-211ENST00000492016 CADPS2Q86UW7 1296 aa22.22■■□□□ 1.15
NELFCD-211ENST00000492016 QRICH2Q9H0J4 1663 aa22.21■■□□□ 1.15
NELFCD-211ENST00000492016 XIRP1Q702N8 1843 aaKnown RBP22.21■■□□□ 1.15
NELFCD-211ENST00000492016 MINK1Q8N4C8 1332 aaPredicted RBP22.21■■□□□ 1.15
NELFCD-211ENST00000492016 NALCNQ8IZF0 1738 aa22.2■■□□□ 1.14
NELFCD-211ENST00000492016 WASLO00401 505 aaPredicted RBP22.2■■□□□ 1.14
NELFCD-211ENST00000492016 ATF3P18847 181 aa22.2■■□□□ 1.14
NELFCD-211ENST00000492016 EVC2Q86UK5 1308 aa22.2■■□□□ 1.14
NELFCD-211ENST00000492016 PUS7Q96PZ0 661 aaKnown RBP22.19■■□□□ 1.14
NELFCD-211ENST00000492016 TMF1P82094 1093 aa22.17■■□□□ 1.14
NELFCD-211ENST00000492016 HIRIP3Q9BW71 556 aaPredicted RBP22.17■■□□□ 1.14
NELFCD-211ENST00000492016 CDCA8Q53HL2 280 aa22.16■■□□□ 1.14
NELFCD-211ENST00000492016 ANKARQ7Z5J8 1434 aa22.15■■□□□ 1.14
NELFCD-211ENST00000492016 CDK19Q9BWU1 502 aa22.15■■□□□ 1.14
NELFCD-211ENST00000492016 TULP4Q9NRJ4 1543 aa22.14■■□□□ 1.13
NELFCD-211ENST00000492016 TOM1O60784 492 aa22.13■■□□□ 1.13
NELFCD-211ENST00000492016 MST1RQ04912 1400 aa22.12■■□□□ 1.13
NELFCD-211ENST00000492016 FMN2Q9NZ56 1722 aa22.11■■□□□ 1.13
NELFCD-211ENST00000492016 SRPK2P78362 688 aaKnown RBP22.1■■□□□ 1.13
NELFCD-211ENST00000492016 SLAIN2Q9P270 581 aa22.1■■□□□ 1.13
NELFCD-211ENST00000492016 ATAD2Q6PL18 1390 aa22.1■■□□□ 1.13
NELFCD-211ENST00000492016 C1orf167Q5SNV9 1468 aa22.09■■□□□ 1.13
NELFCD-211ENST00000492016 DISP3Q9P2K9 1392 aa22.08■■□□□ 1.12
NELFCD-211ENST00000492016 NUDT16Q96DE0 195 aaKnown RBP22.07■■□□□ 1.12
NELFCD-211ENST00000492016 CCDC61Q9Y6R9 512 aa22.07■■□□□ 1.12
NELFCD-211ENST00000492016 ATP7BP35670 1465 aa22.07■■□□□ 1.12
NELFCD-211ENST00000492016 CABP2Q9NPB3 220 aa22.06■■□□□ 1.12
NELFCD-211ENST00000492016 PRR36Q9H6K5 1346 aa22.06■■□□□ 1.12
NELFCD-211ENST00000492016 NINLQ9Y2I6 1382 aa22.05■■□□□ 1.12
NELFCD-211ENST00000492016 UBAP1LF5GYI3 381 aa22.05■■□□□ 1.12
NELFCD-211ENST00000492016 USP32Q8NFA0 1604 aa22.02■■□□□ 1.12
NELFCD-211ENST00000492016 PLEKHG3A1L390 1219 aa22.01■■□□□ 1.11
NELFCD-211ENST00000492016 NUTM2FA1L443 756 aa22.01■■□□□ 1.11
NELFCD-211ENST00000492016 ESCO1Q5FWF5 840 aa22.01■■□□□ 1.11
NELFCD-211ENST00000492016 BRINP3Q76B58 766 aa21.99■■□□□ 1.11
NELFCD-211ENST00000492016 ORAI2Q96SN7 254 aa21.99■■□□□ 1.11
NELFCD-211ENST00000492016 PHF8Q9UPP1 1060 aa21.99■■□□□ 1.11
NELFCD-211ENST00000492016 PPIP5K1Q6PFW1 1433 aa21.98■■□□□ 1.11
NELFCD-211ENST00000492016 TOPAZ1Q8N9V7 1692 aa21.98■■□□□ 1.11
NELFCD-211ENST00000492016 ITSN1Q15811 1721 aa21.98■■□□□ 1.11
NELFCD-211ENST00000492016 C11orf95C9JLR9 678 aaPredicted RBP21.98■■□□□ 1.11
NELFCD-211ENST00000492016 KIF7Q2M1P5 1343 aa21.98■■□□□ 1.11
NELFCD-211ENST00000492016 KIF1AQ12756 1690 aa21.97■■□□□ 1.11
NELFCD-211ENST00000492016 POLR3AO14802 1390 aaPredicted RBP21.97■■□□□ 1.11
NELFCD-211ENST00000492016 CCDC7Q96M83 1385 aa21.97■■□□□ 1.11
NELFCD-211ENST00000492016 CABP1Q9NZU7 370 aa21.96■■□□□ 1.11
NELFCD-211ENST00000492016 ZNF692Q9BU19 519 aaPredicted RBP21.94■■□□□ 1.1
NELFCD-211ENST00000492016 WASHC2AQ641Q2 1341 aa21.94■■□□□ 1.1
NELFCD-211ENST00000492016 NPHP3Q7Z494 1330 aa21.94■■□□□ 1.1
NELFCD-211ENST00000492016 TERF2IPQ9NYB0 399 aa21.93■■□□□ 1.1
NELFCD-211ENST00000492016 ROBO1Q9Y6N7 1651 aa21.92■■□□□ 1.1
NELFCD-211ENST00000492016 BRD4O60885 1362 aaPredicted RBP21.92■■□□□ 1.1
NELFCD-211ENST00000492016 ACEP12821 1306 aa21.92■■□□□ 1.1
NELFCD-211ENST00000492016 PIP4K2BP78356 416 aa21.92■■□□□ 1.1
NELFCD-211ENST00000492016 NGDNQ8NEJ9 315 aaKnown RBP21.92■■□□□ 1.1
NELFCD-211ENST00000492016 TMC1Q8TDI8 760 aa21.92■■□□□ 1.1
NELFCD-211ENST00000492016 SLC12A5Q9H2X9 1139 aa21.92■■□□□ 1.1
NELFCD-211ENST00000492016 CPSF1Q10570 1443 aaKnown RBP21.91■■□□□ 1.1
NELFCD-211ENST00000492016 ZNF316A6NFI3 1004 aaPredicted RBP21.91■■□□□ 1.1
NELFCD-211ENST00000492016 PMFBP1Q8TBY8 1022 aa21.91■■□□□ 1.1
NELFCD-211ENST00000492016 FBXO41Q8TF61 875 aa21.91■■□□□ 1.1
NELFCD-211ENST00000492016 ANKRD36BQ8N2N9 1353 aa21.9■■□□□ 1.1
NELFCD-211ENST00000492016 RGPD8O14715 1765 aaPredicted RBP21.9■■□□□ 1.1
NELFCD-211ENST00000492016 FOXO3O43524 673 aa21.9■■□□□ 1.1
NELFCD-211ENST00000492016 HDGFL2Q7Z4V5 671 aaPredicted RBP21.9■■□□□ 1.1
NELFCD-211ENST00000492016 AHDC1Q5TGY3 1603 aaPredicted RBP21.9■■□□□ 1.1
NELFCD-211ENST00000492016 SCAF1Q9H7N4 1312 aaKnown RBP21.88■■□□□ 1.09
NELFCD-211ENST00000492016 PSME1Q06323 249 aa21.88■■□□□ 1.09
NELFCD-211ENST00000492016 POLR3GLQ9BT43 218 aa21.88■■□□□ 1.09
NELFCD-211ENST00000492016 CD163L1Q9NR16 1453 aa21.88■■□□□ 1.09
NELFCD-211ENST00000492016 SOS2Q07890 1332 aaPredicted RBP21.87■■□□□ 1.09
NELFCD-211ENST00000492016 NHSL1Q5SYE7 1610 aa21.87■■□□□ 1.09
NELFCD-211ENST00000492016 MYOM1P52179 1685 aa21.86■■□□□ 1.09
NELFCD-211ENST00000492016 KRT28Q7Z3Y7 464 aa21.85■■□□□ 1.09
NELFCD-211ENST00000492016 USP6P35125 1406 aa21.85■■□□□ 1.09
NELFCD-211ENST00000492016 A0A1W2PP64 1363 aa21.85■■□□□ 1.09
NELFCD-211ENST00000492016 SBNO1A3KN83 1393 aa21.85■■□□□ 1.09
NELFCD-211ENST00000492016 PXDNQ92626 1479 aa21.84■■□□□ 1.09
NELFCD-211ENST00000492016 KTN1Q86UP2 1357 aaKnown RBP21.84■■□□□ 1.09
NELFCD-211ENST00000492016 EDC4Q6P2E9 1401 aaKnown RBP21.82■■□□□ 1.08
NELFCD-211ENST00000492016 SSH2Q76I76 1423 aa21.82■■□□□ 1.08
NELFCD-211ENST00000492016 LRRC59Q96AG4 307 aaKnown RBP21.81■■□□□ 1.08
NELFCD-211ENST00000492016 AKAP12Q02952 1782 aa21.81■■□□□ 1.08
NELFCD-211ENST00000492016 TTC21AQ8NDW8 1320 aa21.8■■□□□ 1.08
NELFCD-211ENST00000492016 DDX17Q92841 729 aaKnown RBP21.8■■□□□ 1.08
NELFCD-211ENST00000492016 PANK3Q9H999 370 aa21.8■■□□□ 1.08
NELFCD-211ENST00000492016 MON2Q7Z3U7 1717 aa21.78■■□□□ 1.08
NELFCD-211ENST00000492016 SPATA31A3Q5VYP0 1347 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms