RNA–Protein interactions for RNA: ENST00000491952.1

TTC3-222, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 247 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-222ENST00000491952 IRF6O14896 467 aa8.83□□□□□ -1
TTC3-222ENST00000491952 DXOO77932 396 aaKnown RBP8.83□□□□□ -1
TTC3-222ENST00000491952 CTC1Q2NKJ3 1217 aa8.83□□□□□ -1
TTC3-222ENST00000491952 GRIPAP1Q4V328 841 aa8.83□□□□□ -1
TTC3-222ENST00000491952 Q3C1V9 767 aa8.82□□□□□ -1
TTC3-222ENST00000491952 TREML4Q6UXN2 200 aa8.82□□□□□ -1
TTC3-222ENST00000491952 CYP4X1Q8N118 509 aa8.81□□□□□ -1
TTC3-222ENST00000491952 KDM4AO75164 1064 aa8.8□□□□□ -1
TTC3-222ENST00000491952 SMPD1P17405 629 aa8.8□□□□□ -1
TTC3-222ENST00000491952 USP46P62068 366 aa8.79□□□□□ -1
TTC3-222ENST00000491952 TRIM32Q13049 653 aa8.79□□□□□ -1
TTC3-222ENST00000491952 MINK1Q8N4C8 1332 aaPredicted RBP8.79□□□□□ -1
TTC3-222ENST00000491952 USB1Q9BQ65 265 aaKnown RBP8.78□□□□□ -1
TTC3-222ENST00000491952 GMPR2Q9P2T1 348 aaKnown RBP8.78□□□□□ -1
TTC3-222ENST00000491952 AXIN1O15169 862 aa8.77□□□□□ -1.01
TTC3-222ENST00000491952 HOXA2O43364 376 aa8.77□□□□□ -1.01
TTC3-222ENST00000491952 SNIP1Q8TAD8 396 aaKnown RBP8.77□□□□□ -1.01
TTC3-222ENST00000491952 HLA-CQ95604 372 aa8.77□□□□□ -1.01
TTC3-222ENST00000491952 ZBTB24O43167 697 aaPredicted RBP8.76□□□□□ -1.01
TTC3-222ENST00000491952 SKOR1P84550 965 aa8.75□□□□□ -1.01
TTC3-222ENST00000491952 MDM2Q00987 491 aaPredicted RBP8.75□□□□□ -1.01
TTC3-222ENST00000491952 MRGPRX2Q96LB1 330 aa8.75□□□□□ -1.01
TTC3-222ENST00000491952 FAM217BQ9NTX9 383 aaPredicted RBP8.74□□□□□ -1.01
TTC3-222ENST00000491952 NFX1Q12986 1120 aaKnown RBP8.73□□□□□ -1.01
TTC3-222ENST00000491952 CCDC102AQ96A19 550 aa8.73□□□□□ -1.01
TTC3-222ENST00000491952 TTC24A2A3L6 582 aaPredicted RBP8.72□□□□□ -1.01
TTC3-222ENST00000491952 J3QL48 77 aa8.72□□□□□ -1.01
TTC3-222ENST00000491952 HAP1P54257 671 aaPredicted RBP8.72□□□□□ -1.01
TTC3-222ENST00000491952 WNT7BP56706 349 aa8.71□□□□□ -1.02
TTC3-222ENST00000491952 LCE2CQ5TA81 110 aa8.71□□□□□ -1.02
TTC3-222ENST00000491952 GPCPD1Q9NPB8 672 aa8.71□□□□□ -1.02
TTC3-222ENST00000491952 ATP13A2Q9NQ11 1180 aa8.71□□□□□ -1.02
TTC3-222ENST00000491952 JUNDP17535 347 aa8.7□□□□□ -1.02
TTC3-222ENST00000491952 REPIN1Q9BWE0 567 aaKnown RBP8.7□□□□□ -1.02
TTC3-222ENST00000491952 C11orf95C9JLR9 678 aaPredicted RBP8.69□□□□□ -1.02
TTC3-222ENST00000491952 WIPF1O43516 503 aa8.69□□□□□ -1.02
TTC3-222ENST00000491952 GUCA2AQ02747 115 aa8.69□□□□□ -1.02
TTC3-222ENST00000491952 RC3H1Q5TC82 1133 aaKnown RBP8.69□□□□□ -1.02
TTC3-222ENST00000491952 VSIG10Q8N0Z9 540 aa8.69□□□□□ -1.02
TTC3-222ENST00000491952 SIAH2O43255 324 aa8.68□□□□□ -1.02
TTC3-222ENST00000491952 CLCN1P35523 988 aa8.68□□□□□ -1.02
TTC3-222ENST00000491952 HPS1Q92902 700 aa8.68□□□□□ -1.02
TTC3-222ENST00000491952 TRIM47Q96LD4 638 aa8.68□□□□□ -1.02
TTC3-222ENST00000491952 WFS1O76024 890 aa8.67□□□□□ -1.02
TTC3-222ENST00000491952 PTCRAQ6ISU1 281 aaPredicted RBP8.67□□□□□ -1.02
TTC3-222ENST00000491952 SYMPKQ92797 1274 aaKnown RBP8.67□□□□□ -1.02
TTC3-222ENST00000491952 PCDHGC3Q9UN70 934 aa8.67□□□□□ -1.02
TTC3-222ENST00000491952 SNRPBP14678 240 aaKnown RBP8.66□□□□□ -1.02
TTC3-222ENST00000491952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.66□□□□□ -1.02
TTC3-222ENST00000491952 RETREG3Q86VR2 466 aa8.66□□□□□ -1.02
TTC3-222ENST00000491952 CCDC24Q8N4L8 307 aa8.63□□□□□ -1.03
TTC3-222ENST00000491952 TULP1O00294 542 aaPredicted RBP8.62□□□□□ -1.03
TTC3-222ENST00000491952 NUDT12Q9BQG2 462 aa8.62□□□□□ -1.03
TTC3-222ENST00000491952 SENP2Q9HC62 589 aa8.62□□□□□ -1.03
TTC3-222ENST00000491952 TERTO14746 1132 aaKnown RBP8.61□□□□□ -1.03
TTC3-222ENST00000491952 FDX1P10109 184 aa8.61□□□□□ -1.03
TTC3-222ENST00000491952 SPIRE2Q8WWL2 714 aa8.61□□□□□ -1.03
TTC3-222ENST00000491952 SSTR3P32745 418 aaPredicted RBP8.6□□□□□ -1.03
TTC3-222ENST00000491952 SH3BP2P78314 561 aa8.6□□□□□ -1.03
TTC3-222ENST00000491952 BARGINQ6ZT62 677 aa8.6□□□□□ -1.03
TTC3-222ENST00000491952 NUTM1Q86Y26 1132 aa8.6□□□□□ -1.03
TTC3-222ENST00000491952 AMHR2Q16671 573 aa8.59□□□□□ -1.03
TTC3-222ENST00000491952 KIFC2Q96AC6 838 aa8.59□□□□□ -1.03
TTC3-222ENST00000491952 EVA1BQ9NVM1 165 aa8.59□□□□□ -1.03
TTC3-222ENST00000491952 PTPRNQ16849 979 aa8.58□□□□□ -1.04
TTC3-222ENST00000491952 MPNDQ8N594 471 aa8.58□□□□□ -1.04
TTC3-222ENST00000491952 ZMYND10O75800 440 aa8.57□□□□□ -1.04
TTC3-222ENST00000491952 CCNYL3P0C7X3 344 aa8.57□□□□□ -1.04
TTC3-222ENST00000491952 DESI1Q6ICB0 168 aa8.57□□□□□ -1.04
TTC3-222ENST00000491952 TRIM46Q7Z4K8 759 aa8.57□□□□□ -1.04
TTC3-222ENST00000491952 STK17AQ9UEE5 414 aa8.57□□□□□ -1.04
TTC3-222ENST00000491952 MOXD2PA6NHM9 499 aa8.56□□□□□ -1.04
TTC3-222ENST00000491952 ALDH1A1P00352 501 aa8.56□□□□□ -1.04
TTC3-222ENST00000491952 MS4A1P11836 297 aa8.56□□□□□ -1.04
TTC3-222ENST00000491952 GJA5P36382 358 aa8.56□□□□□ -1.04
TTC3-222ENST00000491952 NDUFV2P19404 249 aa8.55□□□□□ -1.04
TTC3-222ENST00000491952 KCNH2Q12809 1159 aa8.54□□□□□ -1.04
TTC3-222ENST00000491952 EHBP1Q8NDI1 1231 aa8.54□□□□□ -1.04
TTC3-222ENST00000491952 UNC93B1Q9H1C4 597 aa8.54□□□□□ -1.04
TTC3-222ENST00000491952 C6orf229H3BNL8 230 aa8.53□□□□□ -1.04
TTC3-222ENST00000491952 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
TTC3-222ENST00000491952 SPDYE5A6NIY4 337 aa8.52□□□□□ -1.05
TTC3-222ENST00000491952 INSM1Q01101 510 aaPredicted RBP8.52□□□□□ -1.05
TTC3-222ENST00000491952 PRR7Q8TB68 274 aa8.52□□□□□ -1.05
TTC3-222ENST00000491952 GIGYF2Q6Y7W6 1299 aaKnown RBP8.51□□□□□ -1.05
TTC3-222ENST00000491952 NPAS3Q8IXF0 933 aa8.51□□□□□ -1.05
TTC3-222ENST00000491952 KLF16Q9BXK1 252 aaPredicted RBP8.51□□□□□ -1.05
TTC3-222ENST00000491952 CAPN5O15484 640 aaPredicted RBP8.5□□□□□ -1.05
TTC3-222ENST00000491952 MTMR2Q13614 643 aa8.5□□□□□ -1.05
TTC3-222ENST00000491952 KRI1Q8N9T8 703 aaKnown RBP8.5□□□□□ -1.05
TTC3-222ENST00000491952 ZNF511Q8NB15 262 aa8.5□□□□□ -1.05
TTC3-222ENST00000491952 ZC3H15Q8WU90 426 aaKnown RBP8.5□□□□□ -1.05
TTC3-222ENST00000491952 BAP1Q92560 729 aa8.5□□□□□ -1.05
TTC3-222ENST00000491952 NXF1Q9UBU9 619 aaKnown RBP8.5□□□□□ -1.05
TTC3-222ENST00000491952 BMP1P13497 986 aa8.49□□□□□ -1.05
TTC3-222ENST00000491952 VARSP26640 1264 aaKnown RBP8.49□□□□□ -1.05
TTC3-222ENST00000491952 RSBN1LQ6PCB5 846 aaPredicted RBP8.49□□□□□ -1.05
TTC3-222ENST00000491952 LYPD8Q6UX82 237 aa8.49□□□□□ -1.05
TTC3-222ENST00000491952 TLL2Q9Y6L7 1015 aa8.48□□□□□ -1.05
TTC3-222ENST00000491952 WASF2Q9Y6W5 498 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms