RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 C19orf44Q9H6X5 657 aa32.95■■■□□ 2.86
SCN5A-213ENST00000491944 EIF3AQ14152 1382 aaKnown RBP32.93■■■□□ 2.86
SCN5A-213ENST00000491944 CENPJQ9HC77 1338 aaPredicted RBP32.9■■■□□ 2.86
SCN5A-213ENST00000491944 QRICH2Q9H0J4 1663 aa32.89■■■□□ 2.86
SCN5A-213ENST00000491944 ATF3P18847 181 aa32.89■■■□□ 2.86
SCN5A-213ENST00000491944 UBAP1LF5GYI3 381 aa32.88■■■□□ 2.85
SCN5A-213ENST00000491944 MINK1Q8N4C8 1332 aaPredicted RBP32.88■■■□□ 2.85
SCN5A-213ENST00000491944 DCCP43146 1447 aa32.87■■■□□ 2.85
SCN5A-213ENST00000491944 CADPS2Q86UW7 1296 aa32.85■■■□□ 2.85
SCN5A-213ENST00000491944 HIRIP3Q9BW71 556 aaPredicted RBP32.85■■■□□ 2.85
SCN5A-213ENST00000491944 CDC42BPGQ6DT37 1551 aa32.85■■■□□ 2.85
SCN5A-213ENST00000491944 TOM1O60784 492 aa32.84■■■□□ 2.85
SCN5A-213ENST00000491944 USP47Q96K76 1375 aa32.84■■■□□ 2.85
SCN5A-213ENST00000491944 ADGRB2O60241 1585 aa32.83■■■□□ 2.85
SCN5A-213ENST00000491944 FMN2Q9NZ56 1722 aa32.77■■■□□ 2.84
SCN5A-213ENST00000491944 SCAF1Q9H7N4 1312 aaKnown RBP32.76■■■□□ 2.83
SCN5A-213ENST00000491944 ST20-MTHFSA0A0A6YYL1 179 aa32.75■■■□□ 2.83
SCN5A-213ENST00000491944 ZEB1P37275 1124 aaPredicted RBP32.75■■■□□ 2.83
SCN5A-213ENST00000491944 PIP4K2BP78356 416 aa32.75■■■□□ 2.83
SCN5A-213ENST00000491944 SLAIN2Q9P270 581 aa32.75■■■□□ 2.83
SCN5A-213ENST00000491944 MST1RQ04912 1400 aa32.75■■■□□ 2.83
SCN5A-213ENST00000491944 NUTM2FA1L443 756 aa32.73■■■□□ 2.83
SCN5A-213ENST00000491944 WASLO00401 505 aaPredicted RBP32.72■■■□□ 2.83
SCN5A-213ENST00000491944 EIF4G2P78344 907 aaKnown RBP eCLIP32.7■■■□□ 2.82
SCN5A-213ENST00000491944 SBNO2Q9Y2G9 1366 aa32.69■■■□□ 2.82
SCN5A-213ENST00000491944 C1orf167Q5SNV9 1468 aa32.69■■■□□ 2.82
SCN5A-213ENST00000491944 TULP4Q9NRJ4 1543 aa32.68■■■□□ 2.82
SCN5A-213ENST00000491944 FBXO41Q8TF61 875 aa32.68■■■□□ 2.82
SCN5A-213ENST00000491944 CDK19Q9BWU1 502 aa32.68■■■□□ 2.82
SCN5A-213ENST00000491944 EVC2Q86UK5 1308 aa32.67■■■□□ 2.82
SCN5A-213ENST00000491944 ROBO1Q9Y6N7 1651 aa32.67■■■□□ 2.82
SCN5A-213ENST00000491944 RGPD8O14715 1765 aaPredicted RBP32.66■■■□□ 2.82
SCN5A-213ENST00000491944 HSPA5P11021 654 aaKnown RBP32.65■■■□□ 2.82
SCN5A-213ENST00000491944 SRPK2P78362 688 aaKnown RBP32.64■■■□□ 2.82
SCN5A-213ENST00000491944 USP32Q8NFA0 1604 aa32.64■■■□□ 2.82
SCN5A-213ENST00000491944 TESK2Q96S53 571 aa32.63■■■□□ 2.81
SCN5A-213ENST00000491944 ANKARQ7Z5J8 1434 aa32.62■■■□□ 2.81
SCN5A-213ENST00000491944 ESCO1Q5FWF5 840 aa32.6■■■□□ 2.81
SCN5A-213ENST00000491944 CABP2Q9NPB3 220 aa32.6■■■□□ 2.81
SCN5A-213ENST00000491944 PRR36Q9H6K5 1346 aa32.6■■■□□ 2.81
SCN5A-213ENST00000491944 BRINP3Q76B58 766 aa32.59■■■□□ 2.81
SCN5A-213ENST00000491944 ORAI2Q96SN7 254 aa32.59■■■□□ 2.81
SCN5A-213ENST00000491944 ATP7BP35670 1465 aa32.58■■■□□ 2.81
SCN5A-213ENST00000491944 ITSN1Q15811 1721 aa32.58■■■□□ 2.81
SCN5A-213ENST00000491944 SLC24A1O60721 1099 aa32.58■■■□□ 2.81
SCN5A-213ENST00000491944 NUDT16Q96DE0 195 aaKnown RBP32.58■■■□□ 2.81
SCN5A-213ENST00000491944 TMF1P82094 1093 aa32.55■■■□□ 2.8
SCN5A-213ENST00000491944 KIF1AQ12756 1690 aa32.53■■■□□ 2.8
SCN5A-213ENST00000491944 TOPAZ1Q8N9V7 1692 aa32.52■■■□□ 2.8
SCN5A-213ENST00000491944 DISP3Q9P2K9 1392 aa32.52■■■□□ 2.8
SCN5A-213ENST00000491944 PHF8Q9UPP1 1060 aa32.51■■■□□ 2.79
SCN5A-213ENST00000491944 CCDC61Q9Y6R9 512 aa32.5■■■□□ 2.79
SCN5A-213ENST00000491944 ATAD2Q6PL18 1390 aa32.48■■■□□ 2.79
SCN5A-213ENST00000491944 PMFBP1Q8TBY8 1022 aa32.48■■■□□ 2.79
SCN5A-213ENST00000491944 NHSL1Q5SYE7 1610 aa32.48■■■□□ 2.79
SCN5A-213ENST00000491944 PHLPP1O60346 1717 aa32.47■■■□□ 2.79
SCN5A-213ENST00000491944 PPIP5K1Q6PFW1 1433 aa32.46■■■□□ 2.79
SCN5A-213ENST00000491944 AHDC1Q5TGY3 1603 aaPredicted RBP32.46■■■□□ 2.79
SCN5A-213ENST00000491944 DDX17Q92841 729 aaKnown RBP32.45■■■□□ 2.79
SCN5A-213ENST00000491944 FOXO3O43524 673 aa32.45■■■□□ 2.78
SCN5A-213ENST00000491944 CDCA8Q53HL2 280 aa32.44■■■□□ 2.78
SCN5A-213ENST00000491944 HSPA1LP34931 641 aa32.43■■■□□ 2.78
SCN5A-213ENST00000491944 NGDNQ8NEJ9 315 aaKnown RBP32.42■■■□□ 2.78
SCN5A-213ENST00000491944 PUS7Q96PZ0 661 aaKnown RBP32.42■■■□□ 2.78
SCN5A-213ENST00000491944 NPHP3Q7Z494 1330 aa32.42■■■□□ 2.78
SCN5A-213ENST00000491944 CABP1Q9NZU7 370 aa32.41■■■□□ 2.78
SCN5A-213ENST00000491944 ILDR1Q86SU0 546 aaPredicted RBP32.4■■■□□ 2.78
SCN5A-213ENST00000491944 PLEKHG3A1L390 1219 aa32.39■■■□□ 2.78
SCN5A-213ENST00000491944 XPCQ01831 940 aaPredicted RBP32.39■■■□□ 2.78
SCN5A-213ENST00000491944 TMC1Q8TDI8 760 aa32.38■■■□□ 2.77
SCN5A-213ENST00000491944 POLR3GLQ9BT43 218 aa32.38■■■□□ 2.77
SCN5A-213ENST00000491944 COL16A1Q07092 1604 aaPredicted RBP32.37■■■□□ 2.77
SCN5A-213ENST00000491944 ACEP12821 1306 aa32.36■■■□□ 2.77
SCN5A-213ENST00000491944 PSME1Q06323 249 aa32.36■■■□□ 2.77
SCN5A-213ENST00000491944 PXDNQ92626 1479 aa32.34■■■□□ 2.77
SCN5A-213ENST00000491944 POLR3AO14802 1390 aaPredicted RBP32.34■■■□□ 2.77
SCN5A-213ENST00000491944 KRT28Q7Z3Y7 464 aa32.33■■■□□ 2.77
SCN5A-213ENST00000491944 SOS2Q07890 1332 aaPredicted RBP32.33■■■□□ 2.77
SCN5A-213ENST00000491944 C11orf95C9JLR9 678 aaPredicted RBP32.32■■■□□ 2.76
SCN5A-213ENST00000491944 SLC12A5Q9H2X9 1139 aa32.32■■■□□ 2.76
SCN5A-213ENST00000491944 NINLQ9Y2I6 1382 aa32.3■■■□□ 2.76
SCN5A-213ENST00000491944 AKAP12Q02952 1782 aa32.3■■■□□ 2.76
SCN5A-213ENST00000491944 MYOM1P52179 1685 aa32.29■■■□□ 2.76
SCN5A-213ENST00000491944 TRPM3Q9HCF6 1732 aaPredicted RBP32.26■■■□□ 2.75
SCN5A-213ENST00000491944 LRRC59Q96AG4 307 aaKnown RBP32.26■■■□□ 2.75
SCN5A-213ENST00000491944 KIF7Q2M1P5 1343 aa32.26■■■□□ 2.75
SCN5A-213ENST00000491944 HDGFL2Q7Z4V5 671 aaPredicted RBP32.24■■■□□ 2.75
SCN5A-213ENST00000491944 TERF2IPQ9NYB0 399 aa32.24■■■□□ 2.75
SCN5A-213ENST00000491944 CD163L1Q9NR16 1453 aa32.24■■■□□ 2.75
SCN5A-213ENST00000491944 CPSF1Q10570 1443 aaKnown RBP32.23■■■□□ 2.75
SCN5A-213ENST00000491944 PAK3O75914 559 aaPredicted RBP32.23■■■□□ 2.75
SCN5A-213ENST00000491944 SBNO1A3KN83 1393 aa32.23■■■□□ 2.75
SCN5A-213ENST00000491944 USP6P35125 1406 aa32.22■■■□□ 2.75
SCN5A-213ENST00000491944 ZNF692Q9BU19 519 aaPredicted RBP32.22■■■□□ 2.75
SCN5A-213ENST00000491944 MON2Q7Z3U7 1717 aa32.22■■■□□ 2.75
SCN5A-213ENST00000491944 KTN1Q86UP2 1357 aaKnown RBP32.22■■■□□ 2.75
SCN5A-213ENST00000491944 A0A1W2PP64 1363 aa32.21■■■□□ 2.75
SCN5A-213ENST00000491944 TNS3Q68CZ2 1445 aa32.21■■■□□ 2.75
SCN5A-213ENST00000491944 JCADQ9P266 1359 aa32.2■■■□□ 2.75
SCN5A-213ENST00000491944 LMOD2Q6P5Q4 547 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms