RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 AEBP2Q6ZN18 517 aaPredicted RBP31.4■■■□□ 2.62
USF3-203ENST00000491165 CENPJQ9HC77 1338 aaPredicted RBP31.4■■■□□ 2.62
USF3-203ENST00000491165 NWD1Q149M9 1564 aa31.36■■■□□ 2.61
USF3-203ENST00000491165 DISP3Q9P2K9 1392 aa31.35■■■□□ 2.61
USF3-203ENST00000491165 PTCH1Q13635 1447 aa31.34■■■□□ 2.61
USF3-203ENST00000491165 FAM135BQ49AJ0 1406 aa31.34■■■□□ 2.61
USF3-203ENST00000491165 POGKQ9P215 609 aa31.33■■■□□ 2.61
USF3-203ENST00000491165 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.32■■■□□ 2.6
USF3-203ENST00000491165 WASHC2AQ641Q2 1341 aa31.32■■■□□ 2.6
USF3-203ENST00000491165 SBNO2Q9Y2G9 1366 aa31.31■■■□□ 2.6
USF3-203ENST00000491165 RBM33Q96EV2 1170 aaKnown RBP31.3■■■□□ 2.6
USF3-203ENST00000491165 SIRT1Q96EB6 747 aa31.3■■■□□ 2.6
USF3-203ENST00000491165 MINK1Q8N4C8 1332 aaPredicted RBP31.29■■■□□ 2.6
USF3-203ENST00000491165 TULP4Q9NRJ4 1543 aa31.28■■■□□ 2.6
USF3-203ENST00000491165 KIF7Q2M1P5 1343 aa31.28■■■□□ 2.6
USF3-203ENST00000491165 ZNF335Q9H4Z2 1342 aaPredicted RBP31.26■■■□□ 2.59
USF3-203ENST00000491165 CCDC7Q96M83 1385 aa31.24■■■□□ 2.59
USF3-203ENST00000491165 TMF1P82094 1093 aa31.22■■■□□ 2.59
USF3-203ENST00000491165 DMRT2Q9Y5R5 561 aa31.22■■■□□ 2.59
USF3-203ENST00000491165 NALCNQ8IZF0 1738 aa31.22■■■□□ 2.59
USF3-203ENST00000491165 NKTRP30414 1462 aaKnown RBP31.21■■■□□ 2.59
USF3-203ENST00000491165 POLR3GLQ9BT43 218 aa31.19■■■□□ 2.58
USF3-203ENST00000491165 ADGRB2O60241 1585 aa31.17■■■□□ 2.58
USF3-203ENST00000491165 FKBP8Q14318 412 aa31.16■■■□□ 2.58
USF3-203ENST00000491165 XIRP1Q702N8 1843 aaKnown RBP31.16■■■□□ 2.58
USF3-203ENST00000491165 TSHZ2Q9NRE2 1034 aa31.15■■■□□ 2.58
USF3-203ENST00000491165 PROSER2Q86WR7 435 aaPredicted RBP31.14■■■□□ 2.58
USF3-203ENST00000491165 CABP2Q9NPB3 220 aa31.13■■■□□ 2.57
USF3-203ENST00000491165 EVC2Q86UK5 1308 aa31.13■■■□□ 2.57
USF3-203ENST00000491165 MYOM1P52179 1685 aa31.13■■■□□ 2.57
USF3-203ENST00000491165 CDK19Q9BWU1 502 aa31.12■■■□□ 2.57
USF3-203ENST00000491165 TMEM94Q12767 1356 aa31.11■■■□□ 2.57
USF3-203ENST00000491165 WASLO00401 505 aaPredicted RBP31.1■■■□□ 2.57
USF3-203ENST00000491165 NEFLP07196 543 aa31.09■■■□□ 2.57
USF3-203ENST00000491165 LRRC7Q96NW7 1537 aa31.09■■■□□ 2.57
USF3-203ENST00000491165 ADGRL3Q9HAR2 1447 aa31.08■■■□□ 2.57
USF3-203ENST00000491165 SLC24A1O60721 1099 aa31.08■■■□□ 2.57
USF3-203ENST00000491165 SRPK2P78362 688 aaKnown RBP31.07■■■□□ 2.56
USF3-203ENST00000491165 USP32Q8NFA0 1604 aa31.05■■■□□ 2.56
USF3-203ENST00000491165 NUTM2FA1L443 756 aa31.04■■■□□ 2.56
USF3-203ENST00000491165 RGPD8O14715 1765 aaPredicted RBP31.04■■■□□ 2.56
USF3-203ENST00000491165 LTBP4Q8N2S1 1624 aa31.04■■■□□ 2.56
USF3-203ENST00000491165 CDC42BPGQ6DT37 1551 aa31.03■■■□□ 2.56
USF3-203ENST00000491165 CDCA8Q53HL2 280 aa31.03■■■□□ 2.56
USF3-203ENST00000491165 PRR36Q9H6K5 1346 aa31.03■■■□□ 2.56
USF3-203ENST00000491165 FMN2Q9NZ56 1722 aa31.03■■■□□ 2.56
USF3-203ENST00000491165 ATP7BP35670 1465 aa31.02■■■□□ 2.56
USF3-203ENST00000491165 C14orf37Q86TY3 774 aa31.01■■■□□ 2.56
USF3-203ENST00000491165 SLC12A5Q9H2X9 1139 aa30.98■■■□□ 2.55
USF3-203ENST00000491165 PUS7Q96PZ0 661 aaKnown RBP30.97■■■□□ 2.55
USF3-203ENST00000491165 NCOA3Q9Y6Q9 1424 aa30.97■■■□□ 2.55
USF3-203ENST00000491165 NUDT16Q96DE0 195 aaKnown RBP30.96■■■□□ 2.55
USF3-203ENST00000491165 TOPAZ1Q8N9V7 1692 aa30.96■■■□□ 2.55
USF3-203ENST00000491165 C19orf44Q9H6X5 657 aa30.95■■■□□ 2.55
USF3-203ENST00000491165 ATAD2Q6PL18 1390 aa30.95■■■□□ 2.55
USF3-203ENST00000491165 TMC1Q8TDI8 760 aa30.95■■■□□ 2.54
USF3-203ENST00000491165 CABP1Q9NZU7 370 aa30.92■■■□□ 2.54
USF3-203ENST00000491165 PPIP5K1Q6PFW1 1433 aa30.91■■■□□ 2.54
USF3-203ENST00000491165 PANK3Q9H999 370 aa30.91■■■□□ 2.54
USF3-203ENST00000491165 CD163L1Q9NR16 1453 aa30.91■■■□□ 2.54
USF3-203ENST00000491165 CCDC61Q9Y6R9 512 aa30.89■■■□□ 2.54
USF3-203ENST00000491165 MSH6P52701 1360 aa30.88■■■□□ 2.53
USF3-203ENST00000491165 ITSN1Q15811 1721 aa30.88■■■□□ 2.53
USF3-203ENST00000491165 DCCP43146 1447 aa30.87■■■□□ 2.53
USF3-203ENST00000491165 HNRNPUQ00839 825 aaKnown RBP eCLIP30.86■■■□□ 2.53
USF3-203ENST00000491165 ANKARQ7Z5J8 1434 aa30.86■■■□□ 2.53
USF3-203ENST00000491165 A0A1W2PP64 1363 aa30.84■■■□□ 2.53
USF3-203ENST00000491165 MST1RQ04912 1400 aa30.84■■■□□ 2.53
USF3-203ENST00000491165 PER1O15534 1290 aaPredicted RBP30.83■■■□□ 2.53
USF3-203ENST00000491165 CARD14Q9BXL6 1004 aa30.83■■■□□ 2.53
USF3-203ENST00000491165 NINLQ9Y2I6 1382 aa30.82■■■□□ 2.52
USF3-203ENST00000491165 ATF3P18847 181 aa30.82■■■□□ 2.52
USF3-203ENST00000491165 PMFBP1Q8TBY8 1022 aa30.82■■■□□ 2.52
USF3-203ENST00000491165 C1orf167Q5SNV9 1468 aa30.81■■■□□ 2.52
USF3-203ENST00000491165 ANKRD36BQ8N2N9 1353 aa30.81■■■□□ 2.52
USF3-203ENST00000491165 AKAP12Q02952 1782 aa30.8■■■□□ 2.52
USF3-203ENST00000491165 ORAI2Q96SN7 254 aa30.8■■■□□ 2.52
USF3-203ENST00000491165 CADPS2Q86UW7 1296 aa30.79■■■□□ 2.52
USF3-203ENST00000491165 CPSF1Q10570 1443 aaKnown RBP30.78■■■□□ 2.52
USF3-203ENST00000491165 PLEKHG3A1L390 1219 aa30.77■■■□□ 2.52
USF3-203ENST00000491165 ESCO1Q5FWF5 840 aa30.76■■■□□ 2.52
USF3-203ENST00000491165 ACEP12821 1306 aa30.76■■■□□ 2.51
USF3-203ENST00000491165 MON2Q7Z3U7 1717 aa30.75■■■□□ 2.51
USF3-203ENST00000491165 NSD3Q9BZ95 1437 aa30.74■■■□□ 2.51
USF3-203ENST00000491165 CNGB1Q14028 1251 aaPredicted RBP30.73■■■□□ 2.51
USF3-203ENST00000491165 POLR3AO14802 1390 aaPredicted RBP30.72■■■□□ 2.51
USF3-203ENST00000491165 TERF2IPQ9NYB0 399 aa30.72■■■□□ 2.51
USF3-203ENST00000491165 PRKRIP1Q9H875 184 aaPredicted RBP30.71■■■□□ 2.51
USF3-203ENST00000491165 PHF8Q9UPP1 1060 aa30.71■■■□□ 2.51
USF3-203ENST00000491165 NRKQ7Z2Y5 1582 aa30.7■■■□□ 2.5
USF3-203ENST00000491165 KTN1Q86UP2 1357 aaKnown RBP30.69■■■□□ 2.5
USF3-203ENST00000491165 HDGFL2Q7Z4V5 671 aaPredicted RBP30.69■■■□□ 2.5
USF3-203ENST00000491165 SLAIN2Q9P270 581 aa30.69■■■□□ 2.5
USF3-203ENST00000491165 AMER1Q5JTC6 1135 aaPredicted RBP30.68■■■□□ 2.5
USF3-203ENST00000491165 NGDNQ8NEJ9 315 aaKnown RBP30.67■■■□□ 2.5
USF3-203ENST00000491165 KNSTRNQ9Y448 316 aa30.67■■■□□ 2.5
USF3-203ENST00000491165 USP6P35125 1406 aa30.66■■■□□ 2.5
USF3-203ENST00000491165 KIF1AQ12756 1690 aa30.65■■■□□ 2.5
USF3-203ENST00000491165 FOXO3O43524 673 aa30.65■■■□□ 2.5
USF3-203ENST00000491165 CCDC184Q52MB2 194 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms