RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 SOS2Q07890 1332 aaPredicted RBP12.81□□□□□ -0.36
PCOLCE-209ENST00000490909 RGPD8O14715 1765 aaPredicted RBP12.8□□□□□ -0.36
PCOLCE-209ENST00000490909 RXRBP28702 533 aa12.8□□□□□ -0.36
PCOLCE-209ENST00000490909 LRRC59Q96AG4 307 aaKnown RBP12.8□□□□□ -0.36
PCOLCE-209ENST00000490909 ORAI2Q96SN7 254 aa12.8□□□□□ -0.36
PCOLCE-209ENST00000490909 KIF1AQ12756 1690 aa12.8□□□□□ -0.36
PCOLCE-209ENST00000490909 PIK3C2GO75747 1445 aa12.79□□□□□ -0.36
PCOLCE-209ENST00000490909 FOXD1Q16676 465 aa12.78□□□□□ -0.36
PCOLCE-209ENST00000490909 USP32Q8NFA0 1604 aa12.77□□□□□ -0.36
PCOLCE-209ENST00000490909 ADGRF5Q8IZF2 1346 aa12.77□□□□□ -0.37
PCOLCE-209ENST00000490909 PLEKHH1Q9ULM0 1364 aa12.77□□□□□ -0.37
PCOLCE-209ENST00000490909 ATRNO75882 1429 aa12.77□□□□□ -0.37
PCOLCE-209ENST00000490909 SLC4A1APQ9BWU0 796 aaKnown RBP12.76□□□□□ -0.37
PCOLCE-209ENST00000490909 RPGRIP1LQ68CZ1 1315 aa12.76□□□□□ -0.37
PCOLCE-209ENST00000490909 CCDC144AA2RUR9 1427 aa12.76□□□□□ -0.37
PCOLCE-209ENST00000490909 GLI3P10071 1580 aa12.76□□□□□ -0.37
PCOLCE-209ENST00000490909 PLCH1Q4KWH8 1693 aa12.76□□□□□ -0.37
PCOLCE-209ENST00000490909 VGFO15240 615 aaPredicted RBP12.75□□□□□ -0.37
PCOLCE-209ENST00000490909 ADAMTS2O95450 1211 aa12.75□□□□□ -0.37
PCOLCE-209ENST00000490909 NRXN1Q9ULB1 1477 aa12.75□□□□□ -0.37
PCOLCE-209ENST00000490909 BRWD3Q6RI45 1802 aa12.74□□□□□ -0.37
PCOLCE-209ENST00000490909 BCL9LQ86UU0 1499 aa12.74□□□□□ -0.37
PCOLCE-209ENST00000490909 LRPPRCP42704 1394 aaKnown RBP12.74□□□□□ -0.37
PCOLCE-209ENST00000490909 RBM6P78332 1123 aaKnown RBP12.74□□□□□ -0.37
PCOLCE-209ENST00000490909 QTRT2Q9H974 415 aaKnown RBP12.73□□□□□ -0.37
PCOLCE-209ENST00000490909 ADGRB2O60241 1585 aa12.72□□□□□ -0.37
PCOLCE-209ENST00000490909 YTHDC2Q9H6S0 1430 aaKnown RBP12.71□□□□□ -0.37
PCOLCE-209ENST00000490909 TRPM3Q9HCF6 1732 aaPredicted RBP12.71□□□□□ -0.37
PCOLCE-209ENST00000490909 CRYBG1Q9Y4K1 1723 aa12.71□□□□□ -0.37
PCOLCE-209ENST00000490909 XPCQ01831 940 aaPredicted RBP12.71□□□□□ -0.37
PCOLCE-209ENST00000490909 NWD2Q9ULI1 1742 aa12.71□□□□□ -0.38
PCOLCE-209ENST00000490909 ANKRD30BQ9BXX2 1392 aa12.7□□□□□ -0.38
PCOLCE-209ENST00000490909 NPHP3Q7Z494 1330 aa12.7□□□□□ -0.38
PCOLCE-209ENST00000490909 ADGRB1O14514 1584 aa12.7□□□□□ -0.38
PCOLCE-209ENST00000490909 FNBP4Q8N3X1 1017 aaPredicted RBP12.7□□□□□ -0.38
PCOLCE-209ENST00000490909 NGLY1Q96IV0 654 aa12.7□□□□□ -0.38
PCOLCE-209ENST00000490909 SLIT2O94813 1529 aa12.7□□□□□ -0.38
PCOLCE-209ENST00000490909 NRAPQ86VF7 1730 aa12.7□□□□□ -0.38
PCOLCE-209ENST00000490909 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
PCOLCE-209ENST00000490909 ABCC11Q96J66 1382 aa12.69□□□□□ -0.38
PCOLCE-209ENST00000490909 WAPLQ7Z5K2 1190 aa12.69□□□□□ -0.38
PCOLCE-209ENST00000490909 USP21Q9UK80 565 aa12.69□□□□□ -0.38
PCOLCE-209ENST00000490909 ALS2Q96Q42 1657 aa12.68□□□□□ -0.38
PCOLCE-209ENST00000490909 RALGAPBQ86X10 1494 aa12.68□□□□□ -0.38
PCOLCE-209ENST00000490909 ESCO1Q5FWF5 840 aa12.68□□□□□ -0.38
PCOLCE-209ENST00000490909 DLC1Q96QB1 1528 aa12.67□□□□□ -0.38
PCOLCE-209ENST00000490909 NUTM2FA1L443 756 aa12.67□□□□□ -0.38
PCOLCE-209ENST00000490909 FOXO3O43524 673 aa12.67□□□□□ -0.38
PCOLCE-209ENST00000490909 TMEM132EQ6IEE7 984 aa12.67□□□□□ -0.38
PCOLCE-209ENST00000490909 STK26Q9P289 416 aa12.67□□□□□ -0.38
PCOLCE-209ENST00000490909 TRPC5Q9UL62 973 aaPredicted RBP12.67□□□□□ -0.38
PCOLCE-209ENST00000490909 TNS3Q68CZ2 1445 aa12.67□□□□□ -0.38
PCOLCE-209ENST00000490909 RGL3Q3MIN7 710 aa12.66□□□□□ -0.38
PCOLCE-209ENST00000490909 ARHGEF28Q8N1W1 1705 aaKnown RBP12.65□□□□□ -0.38
PCOLCE-209ENST00000490909 MPHOSPH9Q99550 1183 aa12.65□□□□□ -0.38
PCOLCE-209ENST00000490909 SPATA31A3Q5VYP0 1347 aa12.63□□□□□ -0.39
PCOLCE-209ENST00000490909 TOPAZ1Q8N9V7 1692 aa12.61□□□□□ -0.39
PCOLCE-209ENST00000490909 PHRF1Q9P1Y6 1649 aaKnown RBP12.61□□□□□ -0.39
PCOLCE-209ENST00000490909 TULP4Q9NRJ4 1543 aa12.61□□□□□ -0.39
PCOLCE-209ENST00000490909 ANKARQ7Z5J8 1434 aa12.61□□□□□ -0.39
PCOLCE-209ENST00000490909 ITSN1Q15811 1721 aa12.6□□□□□ -0.39
PCOLCE-209ENST00000490909 GJD4Q96KN9 370 aaPredicted RBP12.6□□□□□ -0.39
PCOLCE-209ENST00000490909 COL14A1Q05707 1796 aaKnown RBP12.59□□□□□ -0.39
PCOLCE-209ENST00000490909 THSD7AQ9UPZ6 1657 aa12.59□□□□□ -0.39
PCOLCE-209ENST00000490909 CFAP70Q5T0N1 1121 aa12.59□□□□□ -0.39
PCOLCE-209ENST00000490909 C14orf93Q9H972 538 aaKnown RBP12.59□□□□□ -0.39
PCOLCE-209ENST00000490909 TNS1Q9HBL0 1735 aaKnown RBP12.59□□□□□ -0.39
PCOLCE-209ENST00000490909 SBNO1A3KN83 1393 aa12.58□□□□□ -0.4
PCOLCE-209ENST00000490909 RAB3GAP2Q9H2M9 1393 aa12.58□□□□□ -0.4
PCOLCE-209ENST00000490909 LRP5O75197 1615 aa12.58□□□□□ -0.4
PCOLCE-209ENST00000490909 BLMP54132 1417 aaPredicted RBP12.57□□□□□ -0.4
PCOLCE-209ENST00000490909 UNC5CLQ8IV45 518 aa12.57□□□□□ -0.4
PCOLCE-209ENST00000490909 CABLES1Q8TDN4 633 aa12.57□□□□□ -0.4
PCOLCE-209ENST00000490909 PRAM1Q96QH2 718 aa12.57□□□□□ -0.4
PCOLCE-209ENST00000490909 ATP7BP35670 1465 aa12.57□□□□□ -0.4
PCOLCE-209ENST00000490909 DHX57Q6P158 1386 aaKnown RBP12.56□□□□□ -0.4
PCOLCE-209ENST00000490909 SAFB2Q14151 953 aaKnown RBP eCLIP12.56□□□□□ -0.4
PCOLCE-209ENST00000490909 KRT28Q7Z3Y7 464 aa12.56□□□□□ -0.4
PCOLCE-209ENST00000490909 SIRT1Q96EB6 747 aa12.56□□□□□ -0.4
PCOLCE-209ENST00000490909 PHF8Q9UPP1 1060 aa12.56□□□□□ -0.4
PCOLCE-209ENST00000490909 RGPD1P0DJD0 1748 aa12.56□□□□□ -0.4
PCOLCE-209ENST00000490909 PRR36Q9H6K5 1346 aa12.56□□□□□ -0.4
PCOLCE-209ENST00000490909 ARHGEF10O15013 1369 aa12.55□□□□□ -0.4
PCOLCE-209ENST00000490909 NRKQ7Z2Y5 1582 aa12.53□□□□□ -0.4
PCOLCE-209ENST00000490909 KIAA1210Q9ULL0 1709 aa12.52□□□□□ -0.41
PCOLCE-209ENST00000490909 PLEKHG5O94827 1062 aa12.52□□□□□ -0.41
PCOLCE-209ENST00000490909 VPS72Q15906 364 aa12.52□□□□□ -0.41
PCOLCE-209ENST00000490909 DEFB132Q7Z7B7 95 aa12.51□□□□□ -0.41
PCOLCE-209ENST00000490909 SEPT12Q8IYM1 358 aa12.51□□□□□ -0.41
PCOLCE-209ENST00000490909 PMFBP1Q8TBY8 1022 aa12.51□□□□□ -0.41
PCOLCE-209ENST00000490909 HIRIP3Q9BW71 556 aaPredicted RBP12.51□□□□□ -0.41
PCOLCE-209ENST00000490909 ACIN1Q9UKV3 1341 aaKnown RBP12.5□□□□□ -0.41
PCOLCE-209ENST00000490909 LMO7Q8WWI1 1683 aa12.5□□□□□ -0.41
PCOLCE-209ENST00000490909 MINK1Q8N4C8 1332 aaPredicted RBP12.49□□□□□ -0.41
PCOLCE-209ENST00000490909 FAM83GA6ND36 823 aa12.49□□□□□ -0.41
PCOLCE-209ENST00000490909 CCDC125Q86Z20 511 aa12.49□□□□□ -0.41
PCOLCE-209ENST00000490909 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
PCOLCE-209ENST00000490909 TRAK1Q9UPV9 953 aa12.49□□□□□ -0.41
PCOLCE-209ENST00000490909 EIF3AQ14152 1382 aaKnown RBP12.48□□□□□ -0.41
PCOLCE-209ENST00000490909 ONECUT3O60422 494 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms