RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 WAPLQ7Z5K2 1190 aa29.11■■■□□ 2.25
SREBF1-216ENST00000490796 SOS2Q07890 1332 aaPredicted RBP29.11■■■□□ 2.25
SREBF1-216ENST00000490796 ADAMTS2O95450 1211 aa29.09■■■□□ 2.25
SREBF1-216ENST00000490796 ABCC11Q96J66 1382 aa29.09■■■□□ 2.25
SREBF1-216ENST00000490796 PIK3C2GO75747 1445 aa29.09■■■□□ 2.25
SREBF1-216ENST00000490796 IFT172Q9UG01 1749 aa29.08■■■□□ 2.25
SREBF1-216ENST00000490796 NGLY1Q96IV0 654 aa29.08■■■□□ 2.25
SREBF1-216ENST00000490796 NPHP3Q7Z494 1330 aa29.08■■■□□ 2.25
SREBF1-216ENST00000490796 RAB3GAP2Q9H2M9 1393 aa29.08■■■□□ 2.25
SREBF1-216ENST00000490796 TECPR2O15040 1411 aa29.07■■■□□ 2.24
SREBF1-216ENST00000490796 CDC42BPGQ6DT37 1551 aa29.07■■■□□ 2.24
SREBF1-216ENST00000490796 NUTM2FA1L443 756 aa29.06■■■□□ 2.24
SREBF1-216ENST00000490796 LAMC1P11047 1609 aa29.05■■■□□ 2.24
SREBF1-216ENST00000490796 YTHDC2Q9H6S0 1430 aaKnown RBP29.04■■■□□ 2.24
SREBF1-216ENST00000490796 C14orf93Q9H972 538 aaKnown RBP29.03■■■□□ 2.24
SREBF1-216ENST00000490796 QTRT2Q9H974 415 aaKnown RBP29.03■■■□□ 2.24
SREBF1-216ENST00000490796 DHX57Q6P158 1386 aaKnown RBP29.01■■■□□ 2.24
SREBF1-216ENST00000490796 FOXO3O43524 673 aa29.01■■■□□ 2.23
SREBF1-216ENST00000490796 PLEKHH1Q9ULM0 1364 aa29.01■■■□□ 2.23
SREBF1-216ENST00000490796 CFAP70Q5T0N1 1121 aa29■■■□□ 2.23
SREBF1-216ENST00000490796 RBM6P78332 1123 aaKnown RBP28.99■■■□□ 2.23
SREBF1-216ENST00000490796 KNDC1Q76NI1 1749 aa28.99■■■□□ 2.23
SREBF1-216ENST00000490796 XPCQ01831 940 aaPredicted RBP28.98■■■□□ 2.23
SREBF1-216ENST00000490796 SIRT1Q96EB6 747 aa28.98■■■□□ 2.23
SREBF1-216ENST00000490796 CDK12Q9NYV4 1490 aaPredicted RBP28.97■■■□□ 2.23
SREBF1-216ENST00000490796 MYOM2P54296 1465 aa28.97■■■□□ 2.23
SREBF1-216ENST00000490796 UPF1Q92900 1129 aaKnown RBP eCLIP28.94■■■□□ 2.22
SREBF1-216ENST00000490796 USP21Q9UK80 565 aa28.94■■■□□ 2.22
SREBF1-216ENST00000490796 NRXN1Q9ULB1 1477 aa28.93■■■□□ 2.22
SREBF1-216ENST00000490796 POGKQ9P215 609 aa28.93■■■□□ 2.22
SREBF1-216ENST00000490796 SAFB2Q14151 953 aaKnown RBP eCLIP28.92■■■□□ 2.22
SREBF1-216ENST00000490796 PXDNQ92626 1479 aa28.91■■■□□ 2.22
SREBF1-216ENST00000490796 PRAM1Q96QH2 718 aa28.9■■■□□ 2.22
SREBF1-216ENST00000490796 TRPC5Q9UL62 973 aaPredicted RBP28.9■■■□□ 2.22
SREBF1-216ENST00000490796 KDM2AQ9Y2K7 1162 aa28.89■■■□□ 2.22
SREBF1-216ENST00000490796 FMN2Q9NZ56 1722 aa28.88■■■□□ 2.21
SREBF1-216ENST00000490796 COL22A1Q8NFW1 1626 aaPredicted RBP28.87■■■□□ 2.21
SREBF1-216ENST00000490796 HRCP23327 699 aa28.87■■■□□ 2.21
SREBF1-216ENST00000490796 FNBP4Q8N3X1 1017 aaPredicted RBP28.87■■■□□ 2.21
SREBF1-216ENST00000490796 DCAF11Q8TEB1 546 aa28.87■■■□□ 2.21
SREBF1-216ENST00000490796 KRT28Q7Z3Y7 464 aa28.86■■■□□ 2.21
SREBF1-216ENST00000490796 RGS12O14924 1447 aa28.86■■■□□ 2.21
SREBF1-216ENST00000490796 PHF8Q9UPP1 1060 aa28.85■■■□□ 2.21
SREBF1-216ENST00000490796 KIF1AQ12756 1690 aa28.84■■■□□ 2.21
SREBF1-216ENST00000490796 PSME1Q06323 249 aa28.84■■■□□ 2.21
SREBF1-216ENST00000490796 HAP1P54257 671 aaPredicted RBP28.82■■■□□ 2.2
SREBF1-216ENST00000490796 STAC3Q96MF2 364 aa28.82■■■□□ 2.2
SREBF1-216ENST00000490796 TRAK1Q9UPV9 953 aa28.82■■■□□ 2.2
SREBF1-216ENST00000490796 SPATA31A3Q5VYP0 1347 aa28.82■■■□□ 2.2
SREBF1-216ENST00000490796 DLC1Q96QB1 1528 aa28.79■■■□□ 2.2
SREBF1-216ENST00000490796 LMOD2Q6P5Q4 547 aa28.78■■■□□ 2.2
SREBF1-216ENST00000490796 ATRNO75882 1429 aa28.76■■■□□ 2.19
SREBF1-216ENST00000490796 PLEKHG5O94827 1062 aa28.75■■■□□ 2.19
SREBF1-216ENST00000490796 HIRIP3Q9BW71 556 aaPredicted RBP28.75■■■□□ 2.19
SREBF1-216ENST00000490796 MINK1Q8N4C8 1332 aaPredicted RBP28.74■■■□□ 2.19
SREBF1-216ENST00000490796 PMFBP1Q8TBY8 1022 aa28.74■■■□□ 2.19
SREBF1-216ENST00000490796 ADGRB1O14514 1584 aa28.73■■■□□ 2.19
SREBF1-216ENST00000490796 TNS3Q68CZ2 1445 aa28.73■■■□□ 2.19
SREBF1-216ENST00000490796 ANKARQ7Z5J8 1434 aa28.73■■■□□ 2.19
SREBF1-216ENST00000490796 EIF3AQ14152 1382 aaKnown RBP28.73■■■□□ 2.19
SREBF1-216ENST00000490796 ATAD2Q6PL18 1390 aa28.73■■■□□ 2.19
SREBF1-216ENST00000490796 RGPD8O14715 1765 aaPredicted RBP28.73■■■□□ 2.19
SREBF1-216ENST00000490796 MARF1Q9Y4F3 1742 aaKnown RBP28.71■■■□□ 2.19
SREBF1-216ENST00000490796 BCL9LQ86UU0 1499 aa28.71■■■□□ 2.19
SREBF1-216ENST00000490796 SBNO1A3KN83 1393 aa28.7■■■□□ 2.18
SREBF1-216ENST00000490796 UNC5CLQ8IV45 518 aa28.69■■■□□ 2.18
SREBF1-216ENST00000490796 GJD4Q96KN9 370 aaPredicted RBP28.69■■■□□ 2.18
SREBF1-216ENST00000490796 ARHGEF10O15013 1369 aa28.69■■■□□ 2.18
SREBF1-216ENST00000490796 CABLES1Q8TDN4 633 aa28.68■■■□□ 2.18
SREBF1-216ENST00000490796 ADGRB2O60241 1585 aa28.67■■■□□ 2.18
SREBF1-216ENST00000490796 GPRASP1Q5JY77 1395 aa28.66■■■□□ 2.18
SREBF1-216ENST00000490796 WASLO00401 505 aaPredicted RBP28.66■■■□□ 2.18
SREBF1-216ENST00000490796 USP32Q8NFA0 1604 aa28.63■■■□□ 2.17
SREBF1-216ENST00000490796 NGDNQ8NEJ9 315 aaKnown RBP28.63■■■□□ 2.17
SREBF1-216ENST00000490796 SLIT2O94813 1529 aa28.62■■■□□ 2.17
SREBF1-216ENST00000490796 CCDC9Q9Y3X0 531 aaKnown RBP28.61■■■□□ 2.17
SREBF1-216ENST00000490796 TULP4Q9NRJ4 1543 aa28.59■■■□□ 2.17
SREBF1-216ENST00000490796 PRR36Q9H6K5 1346 aa28.59■■■□□ 2.17
SREBF1-216ENST00000490796 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.58■■■□□ 2.17
SREBF1-216ENST00000490796 PAK3O75914 559 aaPredicted RBP28.57■■■□□ 2.16
SREBF1-216ENST00000490796 RALGAPBQ86X10 1494 aa28.57■■■□□ 2.16
SREBF1-216ENST00000490796 VPS72Q15906 364 aa28.55■■■□□ 2.16
SREBF1-216ENST00000490796 CCDC125Q86Z20 511 aa28.53■■■□□ 2.16
SREBF1-216ENST00000490796 NUDT16Q96DE0 195 aaKnown RBP28.53■■■□□ 2.16
SREBF1-216ENST00000490796 FAM83GA6ND36 823 aa28.51■■■□□ 2.15
SREBF1-216ENST00000490796 CDK19Q9BWU1 502 aa28.51■■■□□ 2.15
SREBF1-216ENST00000490796 ARHGEF28Q8N1W1 1705 aaKnown RBP28.51■■■□□ 2.15
SREBF1-216ENST00000490796 GLI3P10071 1580 aa28.5■■■□□ 2.15
SREBF1-216ENST00000490796 SEPT12Q8IYM1 358 aa28.49■■■□□ 2.15
SREBF1-216ENST00000490796 A0A0G2JS52 829 aa28.48■■■□□ 2.15
SREBF1-216ENST00000490796 MYT1Q01538 1121 aa28.48■■■□□ 2.15
SREBF1-216ENST00000490796 ABCA3Q99758 1704 aa28.48■■■□□ 2.15
SREBF1-216ENST00000490796 TRPM3Q9HCF6 1732 aaPredicted RBP28.47■■■□□ 2.15
SREBF1-216ENST00000490796 NWD2Q9ULI1 1742 aa28.47■■■□□ 2.15
SREBF1-216ENST00000490796 BTG4Q9NY30 223 aa28.47■■■□□ 2.15
SREBF1-216ENST00000490796 PLCH1Q4KWH8 1693 aa28.47■■■□□ 2.15
SREBF1-216ENST00000490796 NBPF1Q3BBV0 1214 aa28.45■■■□□ 2.14
SREBF1-216ENST00000490796 ITSN1Q15811 1721 aa28.45■■■□□ 2.14
SREBF1-216ENST00000490796 KIAA1210Q9ULL0 1709 aa28.45■■■□□ 2.14
SREBF1-216ENST00000490796 ATP7BP35670 1465 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms