RNA–Protein interactions for RNA: ENST00000490647.1

LINC02049-201, Transcript of long intergenic non-protein coding RNA 2049, humanhuman

TSL 1 (best) BASIC

Gene LINC02049, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02049-201ENST00000490647 PRDM9Q9NQV7 894 aa10.32□□□□□ -0.76
LINC02049-201ENST00000490647 QPCTQ16769 361 aa10.31□□□□□ -0.76
LINC02049-201ENST00000490647 CLK2P49760 499 aaKnown RBP10.3□□□□□ -0.76
LINC02049-201ENST00000490647 SH3D19Q5HYK7 790 aa10.3□□□□□ -0.76
LINC02049-201ENST00000490647 SPSB2Q99619 263 aa10.3□□□□□ -0.76
LINC02049-201ENST00000490647 FMNL1O95466 1100 aaPredicted RBP10.29□□□□□ -0.76
LINC02049-201ENST00000490647 ADH1BP00325 375 aa10.29□□□□□ -0.76
LINC02049-201ENST00000490647 DIXDC1Q155Q3 683 aa10.29□□□□□ -0.76
LINC02049-201ENST00000490647 IFFO2Q5TF58 517 aa10.29□□□□□ -0.76
LINC02049-201ENST00000490647 S1PR4O95977 384 aa10.28□□□□□ -0.76
LINC02049-201ENST00000490647 C6orf229H3BNL8 230 aa10.27□□□□□ -0.77
LINC02049-201ENST00000490647 PPEF1O14829 653 aaPredicted RBP10.27□□□□□ -0.77
LINC02049-201ENST00000490647 SKIV2LQ15477 1246 aaKnown RBP10.27□□□□□ -0.77
LINC02049-201ENST00000490647 RSPH6AQ9H0K4 717 aa10.27□□□□□ -0.77
LINC02049-201ENST00000490647 SALL2Q9Y467 1007 aaPredicted RBP10.27□□□□□ -0.77
LINC02049-201ENST00000490647 HRCP23327 699 aa10.26□□□□□ -0.77
LINC02049-201ENST00000490647 Q3C1V9 767 aa10.26□□□□□ -0.77
LINC02049-201ENST00000490647 PPP1R18Q6NYC8 613 aa10.26□□□□□ -0.77
LINC02049-201ENST00000490647 A0A0G2JS52 829 aa10.25□□□□□ -0.77
LINC02049-201ENST00000490647 GJA5P36382 358 aa10.25□□□□□ -0.77
LINC02049-201ENST00000490647 RTL5Q5HYW3 569 aaPredicted RBP10.25□□□□□ -0.77
LINC02049-201ENST00000490647 USB1Q9BQ65 265 aaKnown RBP10.25□□□□□ -0.77
LINC02049-201ENST00000490647 CFAP99D6REC4 459 aa10.24□□□□□ -0.77
LINC02049-201ENST00000490647 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.24□□□□□ -0.77
LINC02049-201ENST00000490647 SLC6A16Q9GZN6 736 aa10.24□□□□□ -0.77
LINC02049-201ENST00000490647 LILRB3O75022 631 aa10.23□□□□□ -0.77
LINC02049-201ENST00000490647 MTMR2Q13614 643 aa10.23□□□□□ -0.77
LINC02049-201ENST00000490647 RNF223E7ERA6 249 aa10.22□□□□□ -0.77
LINC02049-201ENST00000490647 TUSC1Q2TAM9 212 aa10.22□□□□□ -0.77
LINC02049-201ENST00000490647 MSS51Q4VC12 460 aa10.22□□□□□ -0.77
LINC02049-201ENST00000490647 RETREG3Q86VR2 466 aa10.22□□□□□ -0.77
LINC02049-201ENST00000490647 PRR7Q8TB68 274 aa10.22□□□□□ -0.77
LINC02049-201ENST00000490647 ZBTB3Q9H5J0 574 aa10.21□□□□□ -0.77
LINC02049-201ENST00000490647 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.21□□□□□ -0.77
LINC02049-201ENST00000490647 PLA2G2CQ5R387 149 aa10.2□□□□□ -0.78
LINC02049-201ENST00000490647 ATP1B4Q9UN42 357 aaPredicted RBP10.2□□□□□ -0.78
LINC02049-201ENST00000490647 NUTM2BA6NNL0 878 aaPredicted RBP10.19□□□□□ -0.78
LINC02049-201ENST00000490647 NUTM2EB1AL46 878 aaPredicted RBP10.19□□□□□ -0.78
LINC02049-201ENST00000490647 NUTM2DQ5VT03 806 aaPredicted RBP10.19□□□□□ -0.78
LINC02049-201ENST00000490647 PRPF38BQ5VTL8 546 aaKnown RBP10.19□□□□□ -0.78
LINC02049-201ENST00000490647 NUTM2AQ8IVF1 878 aaPredicted RBP10.19□□□□□ -0.78
LINC02049-201ENST00000490647 EMID1Q96A84 441 aaPredicted RBP10.19□□□□□ -0.78
LINC02049-201ENST00000490647 GOPCQ9HD26 462 aa10.19□□□□□ -0.78
LINC02049-201ENST00000490647 DXOO77932 396 aaKnown RBP10.18□□□□□ -0.78
LINC02049-201ENST00000490647 MMP16P51512 607 aa10.18□□□□□ -0.78
LINC02049-201ENST00000490647 PCMTD1Q96MG8 357 aaPredicted RBP10.18□□□□□ -0.78
LINC02049-201ENST00000490647 JUNDP17535 347 aa10.17□□□□□ -0.78
LINC02049-201ENST00000490647 PER1O15534 1290 aaPredicted RBP10.16□□□□□ -0.78
LINC02049-201ENST00000490647 FCF1Q9Y324 198 aaKnown RBP10.16□□□□□ -0.78
LINC02049-201ENST00000490647 PPP2R2DQ66LE6 453 aa10.15□□□□□ -0.78
LINC02049-201ENST00000490647 TSC1Q92574 1164 aa10.15□□□□□ -0.78
LINC02049-201ENST00000490647 SPDYE5A6NIY4 337 aa10.14□□□□□ -0.79
LINC02049-201ENST00000490647 RFC5P40937 340 aa10.13□□□□□ -0.79
LINC02049-201ENST00000490647 ANKLE1Q8NAG6 615 aa10.13□□□□□ -0.79
LINC02049-201ENST00000490647 GGCXP38435 758 aa10.12□□□□□ -0.79
LINC02049-201ENST00000490647 CTDSPL2Q05D32 466 aa10.12□□□□□ -0.79
LINC02049-201ENST00000490647 LIAT1Q6ZQX7 453 aa10.12□□□□□ -0.79
LINC02049-201ENST00000490647 PTCRAQ6ISU1 281 aaPredicted RBP10.11□□□□□ -0.79
LINC02049-201ENST00000490647 CCDC24Q8N4L8 307 aa10.1□□□□□ -0.79
LINC02049-201ENST00000490647 AP1G2O75843 785 aa10.09□□□□□ -0.79
LINC02049-201ENST00000490647 TMEM132AQ24JP5 1023 aa10.09□□□□□ -0.79
LINC02049-201ENST00000490647 DESI1Q6ICB0 168 aa10.09□□□□□ -0.79
LINC02049-201ENST00000490647 LYPD8Q6UX82 237 aa10.09□□□□□ -0.79
LINC02049-201ENST00000490647 LRRN4Q8WUT4 740 aa10.09□□□□□ -0.79
LINC02049-201ENST00000490647 NUDT12Q9BQG2 462 aa10.09□□□□□ -0.79
LINC02049-201ENST00000490647 PRKD2Q9BZL6 878 aa10.08□□□□□ -0.8
LINC02049-201ENST00000490647 PTPRNQ16849 979 aa10.07□□□□□ -0.8
LINC02049-201ENST00000490647 MAP10Q9P2G4 905 aa10.07□□□□□ -0.8
LINC02049-201ENST00000490647 CCNYL3P0C7X3 344 aa10.06□□□□□ -0.8
LINC02049-201ENST00000490647 HMX1Q9NP08 348 aaPredicted RBP10.06□□□□□ -0.8
LINC02049-201ENST00000490647 F12P00748 615 aaPredicted RBP10.05□□□□□ -0.8
LINC02049-201ENST00000490647 USP17L8P0C7I0 530 aa10.04□□□□□ -0.8
LINC02049-201ENST00000490647 SLC19A1P41440 591 aa10.04□□□□□ -0.8
LINC02049-201ENST00000490647 HELBQ8NG08 1087 aaPredicted RBP10.04□□□□□ -0.8
LINC02049-201ENST00000490647 EVA1BQ9NVM1 165 aa10.04□□□□□ -0.8
LINC02049-201ENST00000490647 EPS8L1Q8TE68 723 aa10.03□□□□□ -0.8
LINC02049-201ENST00000490647 CTHP32929 405 aa10.02□□□□□ -0.81
LINC02049-201ENST00000490647 KCNH2Q12809 1159 aa10.02□□□□□ -0.81
LINC02049-201ENST00000490647 SNRKQ9NRH2 765 aa10.01□□□□□ -0.81
LINC02049-201ENST00000490647 SPRYD7Q5W111 196 aa10□□□□□ -0.81
LINC02049-201ENST00000490647 UNC93B1Q9H1C4 597 aa10□□□□□ -0.81
LINC02049-201ENST00000490647 SKOR1P84550 965 aa9.99□□□□□ -0.81
LINC02049-201ENST00000490647 TRIM32Q13049 653 aa9.99□□□□□ -0.81
LINC02049-201ENST00000490647 NR6A1Q15406 480 aa9.99□□□□□ -0.81
LINC02049-201ENST00000490647 TMEM259Q4ZIN3 620 aa9.99□□□□□ -0.81
LINC02049-201ENST00000490647 RPIAP49247 311 aa9.98□□□□□ -0.81
LINC02049-201ENST00000490647 LINC01559Q495D7 138 aa9.98□□□□□ -0.81
LINC02049-201ENST00000490647 TRIM34Q9BYJ4 488 aa9.98□□□□□ -0.81
LINC02049-201ENST00000490647 V9GY48 417 aaPredicted RBP9.98□□□□□ -0.81
LINC02049-201ENST00000490647 MTMR14Q8NCE2 650 aa9.97□□□□□ -0.81
LINC02049-201ENST00000490647 ZBTB24O43167 697 aaPredicted RBP9.96□□□□□ -0.82
LINC02049-201ENST00000490647 ZNF697Q5TEC3 545 aa9.96□□□□□ -0.82
LINC02049-201ENST00000490647 BAP1Q92560 729 aa9.96□□□□□ -0.82
LINC02049-201ENST00000490647 GJD4Q96KN9 370 aaPredicted RBP9.96□□□□□ -0.82
LINC02049-201ENST00000490647 RGS20O76081 388 aa9.95□□□□□ -0.82
LINC02049-201ENST00000490647 TRIM67Q6ZTA4 783 aa9.95□□□□□ -0.82
LINC02049-201ENST00000490647 IRX2Q9BZI1 471 aaPredicted RBP9.95□□□□□ -0.82
LINC02049-201ENST00000490647 SH3BP2P78314 561 aa9.94□□□□□ -0.82
LINC02049-201ENST00000490647 ZNF598Q86UK7 904 aaKnown RBP9.94□□□□□ -0.82
LINC02049-201ENST00000490647 PKD2L1Q9P0L9 805 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms