RNA–Protein interactions for RNA: ENST00000490546.1

PUM1-210, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-210ENST00000490546 SBNO2Q9Y2G9 1366 aa14.38□□□□□ -0.11
PUM1-210ENST00000490546 ZNF335Q9H4Z2 1342 aaPredicted RBP14.38□□□□□ -0.11
PUM1-210ENST00000490546 NKTRP30414 1462 aaKnown RBP14.38□□□□□ -0.11
PUM1-210ENST00000490546 PLEKHH1Q9ULM0 1364 aa14.37□□□□□ -0.11
PUM1-210ENST00000490546 NWD1Q149M9 1564 aa14.37□□□□□ -0.11
PUM1-210ENST00000490546 SRPK2P78362 688 aaKnown RBP14.36□□□□□ -0.11
PUM1-210ENST00000490546 CDK19Q9BWU1 502 aa14.35□□□□□ -0.11
PUM1-210ENST00000490546 WASLO00401 505 aaPredicted RBP14.34□□□□□ -0.11
PUM1-210ENST00000490546 RBM33Q96EV2 1170 aaKnown RBP14.34□□□□□ -0.11
PUM1-210ENST00000490546 PUS7Q96PZ0 661 aaKnown RBP14.34□□□□□ -0.11
PUM1-210ENST00000490546 NCOA3Q9Y6Q9 1424 aa14.33□□□□□ -0.11
PUM1-210ENST00000490546 KIF7Q2M1P5 1343 aa14.33□□□□□ -0.12
PUM1-210ENST00000490546 TMEM94Q12767 1356 aa14.33□□□□□ -0.12
PUM1-210ENST00000490546 CCDC7Q96M83 1385 aa14.33□□□□□ -0.12
PUM1-210ENST00000490546 DISP3Q9P2K9 1392 aa14.33□□□□□ -0.12
PUM1-210ENST00000490546 STRCP1A6NGW2 1772 aa14.32□□□□□ -0.12
PUM1-210ENST00000490546 C11orf95C9JLR9 678 aaPredicted RBP14.32□□□□□ -0.12
PUM1-210ENST00000490546 C19orf44Q9H6X5 657 aa14.32□□□□□ -0.12
PUM1-210ENST00000490546 CABP2Q9NPB3 220 aa14.32□□□□□ -0.12
PUM1-210ENST00000490546 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.32□□□□□ -0.12
PUM1-210ENST00000490546 ATF3P18847 181 aa14.31□□□□□ -0.12
PUM1-210ENST00000490546 WASHC2AQ641Q2 1341 aa14.31□□□□□ -0.12
PUM1-210ENST00000490546 TMC1Q8TDI8 760 aa14.3□□□□□ -0.12
PUM1-210ENST00000490546 MSH6P52701 1360 aa14.3□□□□□ -0.12
PUM1-210ENST00000490546 ADGRL3Q9HAR2 1447 aa14.3□□□□□ -0.12
PUM1-210ENST00000490546 ATAD2Q6PL18 1390 aa14.29□□□□□ -0.12
PUM1-210ENST00000490546 DDX10Q13206 875 aaKnown RBP14.28□□□□□ -0.12
PUM1-210ENST00000490546 CADPS2Q86UW7 1296 aa14.28□□□□□ -0.12
PUM1-210ENST00000490546 NUDT16Q96DE0 195 aaKnown RBP14.28□□□□□ -0.12
PUM1-210ENST00000490546 LRRC7Q96NW7 1537 aa14.28□□□□□ -0.12
PUM1-210ENST00000490546 ADGRB2O60241 1585 aa14.27□□□□□ -0.12
PUM1-210ENST00000490546 TULP4Q9NRJ4 1543 aa14.27□□□□□ -0.12
PUM1-210ENST00000490546 NUTM2FA1L443 756 aa14.27□□□□□ -0.13
PUM1-210ENST00000490546 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
PUM1-210ENST00000490546 NALCNQ8IZF0 1738 aa14.26□□□□□ -0.13
PUM1-210ENST00000490546 NINLQ9Y2I6 1382 aa14.24□□□□□ -0.13
PUM1-210ENST00000490546 TERF2IPQ9NYB0 399 aa14.24□□□□□ -0.13
PUM1-210ENST00000490546 CABP1Q9NZU7 370 aa14.24□□□□□ -0.13
PUM1-210ENST00000490546 CDC42BPGQ6DT37 1551 aa14.24□□□□□ -0.13
PUM1-210ENST00000490546 DCCP43146 1447 aa14.24□□□□□ -0.13
PUM1-210ENST00000490546 XIRP1Q702N8 1843 aaKnown RBP14.23□□□□□ -0.13
PUM1-210ENST00000490546 HDGFL2Q7Z4V5 671 aaPredicted RBP14.23□□□□□ -0.13
PUM1-210ENST00000490546 SLC12A5Q9H2X9 1139 aa14.23□□□□□ -0.13
PUM1-210ENST00000490546 ANKARQ7Z5J8 1434 aa14.23□□□□□ -0.13
PUM1-210ENST00000490546 LTBP4Q8N2S1 1624 aa14.23□□□□□ -0.13
PUM1-210ENST00000490546 FMN2Q9NZ56 1722 aa14.22□□□□□ -0.13
PUM1-210ENST00000490546 ESCO1Q5FWF5 840 aa14.22□□□□□ -0.13
PUM1-210ENST00000490546 PANK3Q9H999 370 aa14.22□□□□□ -0.13
PUM1-210ENST00000490546 NGDNQ8NEJ9 315 aaKnown RBP14.21□□□□□ -0.13
PUM1-210ENST00000490546 PPIP5K1Q6PFW1 1433 aa14.21□□□□□ -0.13
PUM1-210ENST00000490546 PRR36Q9H6K5 1346 aa14.2□□□□□ -0.14
PUM1-210ENST00000490546 PLEKHG3A1L390 1219 aa14.2□□□□□ -0.14
PUM1-210ENST00000490546 ZNF692Q9BU19 519 aaPredicted RBP14.2□□□□□ -0.14
PUM1-210ENST00000490546 SLAIN2Q9P270 581 aa14.2□□□□□ -0.14
PUM1-210ENST00000490546 PHF8Q9UPP1 1060 aa14.2□□□□□ -0.14
PUM1-210ENST00000490546 ITSN1Q15811 1721 aa14.2□□□□□ -0.14
PUM1-210ENST00000490546 RGPD8O14715 1765 aaPredicted RBP14.19□□□□□ -0.14
PUM1-210ENST00000490546 DIEXFQ68CQ4 756 aaKnown RBP14.19□□□□□ -0.14
PUM1-210ENST00000490546 PMFBP1Q8TBY8 1022 aa14.19□□□□□ -0.14
PUM1-210ENST00000490546 KNSTRNQ9Y448 316 aa14.19□□□□□ -0.14
PUM1-210ENST00000490546 ATP7BP35670 1465 aa14.18□□□□□ -0.14
PUM1-210ENST00000490546 TOM1O60784 492 aa14.18□□□□□ -0.14
PUM1-210ENST00000490546 C1orf167Q5SNV9 1468 aa14.18□□□□□ -0.14
PUM1-210ENST00000490546 CERKQ8TCT0 537 aa14.17□□□□□ -0.14
PUM1-210ENST00000490546 ANKRD36BQ8N2N9 1353 aa14.17□□□□□ -0.14
PUM1-210ENST00000490546 ACEP12821 1306 aa14.16□□□□□ -0.14
PUM1-210ENST00000490546 PSME1Q06323 249 aa14.16□□□□□ -0.14
PUM1-210ENST00000490546 ORAI2Q96SN7 254 aa14.16□□□□□ -0.14
PUM1-210ENST00000490546 KTN1Q86UP2 1357 aaKnown RBP14.16□□□□□ -0.14
PUM1-210ENST00000490546 MYOM1P52179 1685 aa14.16□□□□□ -0.14
PUM1-210ENST00000490546 MST1RQ04912 1400 aa14.15□□□□□ -0.14
PUM1-210ENST00000490546 USP32Q8NFA0 1604 aa14.15□□□□□ -0.14
PUM1-210ENST00000490546 TOPAZ1Q8N9V7 1692 aa14.14□□□□□ -0.15
PUM1-210ENST00000490546 IQSEC2Q5JU85 1478 aa14.13□□□□□ -0.15
PUM1-210ENST00000490546 A0A1W2PP64 1363 aa14.13□□□□□ -0.15
PUM1-210ENST00000490546 UBAP1LF5GYI3 381 aa14.13□□□□□ -0.15
PUM1-210ENST00000490546 ANP32CO43423 234 aa14.12□□□□□ -0.15
PUM1-210ENST00000490546 FOXO3O43524 673 aa14.12□□□□□ -0.15
PUM1-210ENST00000490546 CARD14Q9BXL6 1004 aa14.12□□□□□ -0.15
PUM1-210ENST00000490546 CGNL1Q0VF96 1302 aa14.12□□□□□ -0.15
PUM1-210ENST00000490546 POLR3AO14802 1390 aaPredicted RBP14.11□□□□□ -0.15
PUM1-210ENST00000490546 KIF1AQ12756 1690 aa14.11□□□□□ -0.15
PUM1-210ENST00000490546 PAK3O75914 559 aaPredicted RBP14.11□□□□□ -0.15
PUM1-210ENST00000490546 CPSF1Q10570 1443 aaKnown RBP14.11□□□□□ -0.15
PUM1-210ENST00000490546 CNGB1Q14028 1251 aaPredicted RBP14.11□□□□□ -0.15
PUM1-210ENST00000490546 BRINP3Q76B58 766 aa14.11□□□□□ -0.15
PUM1-210ENST00000490546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.11□□□□□ -0.15
PUM1-210ENST00000490546 NSD3Q9BZ95 1437 aa14.11□□□□□ -0.15
PUM1-210ENST00000490546 NPHP3Q7Z494 1330 aa14.11□□□□□ -0.15
PUM1-210ENST00000490546 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
PUM1-210ENST00000490546 BRD4O60885 1362 aaPredicted RBP14.1□□□□□ -0.15
PUM1-210ENST00000490546 EDC4Q6P2E9 1401 aaKnown RBP14.1□□□□□ -0.15
PUM1-210ENST00000490546 AKAP12Q02952 1782 aa14.1□□□□□ -0.15
PUM1-210ENST00000490546 PER1O15534 1290 aaPredicted RBP14.1□□□□□ -0.15
PUM1-210ENST00000490546 KRT28Q7Z3Y7 464 aa14.1□□□□□ -0.15
PUM1-210ENST00000490546 PIP4K2BP78356 416 aa14.09□□□□□ -0.15
PUM1-210ENST00000490546 CD163L1Q9NR16 1453 aa14.09□□□□□ -0.15
PUM1-210ENST00000490546 USP6P35125 1406 aa14.08□□□□□ -0.15
PUM1-210ENST00000490546 TTC21BQ7Z4L5 1316 aa14.08□□□□□ -0.16
PUM1-210ENST00000490546 TTC21AQ8NDW8 1320 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms