RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 PRDM15P57071 1507 aaPredicted RBP14.2□□□□□ -0.14
SRRM1-217ENST00000490543 RNF25Q96BH1 459 aaPredicted RBP14.2□□□□□ -0.14
SRRM1-217ENST00000490543 ABCC5O15440 1437 aa14.2□□□□□ -0.14
SRRM1-217ENST00000490543 VPS8Q8N3P4 1428 aa14.2□□□□□ -0.14
SRRM1-217ENST00000490543 LOC105371045A0A1W2PR82 267 aa14.19□□□□□ -0.14
SRRM1-217ENST00000490543 ROBO1Q9Y6N7 1651 aa14.19□□□□□ -0.14
SRRM1-217ENST00000490543 MAP3K1Q13233 1512 aa14.19□□□□□ -0.14
SRRM1-217ENST00000490543 TET3O43151 1660 aa14.18□□□□□ -0.14
SRRM1-217ENST00000490543 PLCG2P16885 1265 aa14.18□□□□□ -0.14
SRRM1-217ENST00000490543 ERBINQ96RT1 1412 aa14.17□□□□□ -0.14
SRRM1-217ENST00000490543 EFCAB6Q5THR3 1501 aa14.17□□□□□ -0.14
SRRM1-217ENST00000490543 GOLGA2Q08379 1002 aa14.17□□□□□ -0.14
SRRM1-217ENST00000490543 SLAIN2Q9P270 581 aa14.16□□□□□ -0.14
SRRM1-217ENST00000490543 CHIC2Q9UKJ5 165 aa14.16□□□□□ -0.14
SRRM1-217ENST00000490543 KANK1Q14678 1352 aa14.15□□□□□ -0.14
SRRM1-217ENST00000490543 RIOK3O14730 519 aaKnown RBP14.15□□□□□ -0.14
SRRM1-217ENST00000490543 MAMSTRQ6ZN01 415 aa14.15□□□□□ -0.14
SRRM1-217ENST00000490543 MKRN3Q13064 507 aaKnown RBP14.14□□□□□ -0.15
SRRM1-217ENST00000490543 BCANQ96GW7 911 aa14.14□□□□□ -0.15
SRRM1-217ENST00000490543 OCEL1Q9H607 264 aa14.14□□□□□ -0.15
SRRM1-217ENST00000490543 DAPK1P53355 1430 aa14.13□□□□□ -0.15
SRRM1-217ENST00000490543 SETD1AO15047 1707 aaKnown RBP14.12□□□□□ -0.15
SRRM1-217ENST00000490543 MSH6P52701 1360 aa14.12□□□□□ -0.15
SRRM1-217ENST00000490543 KDM5AP29375 1690 aaKnown RBP14.12□□□□□ -0.15
SRRM1-217ENST00000490543 CABP2Q9NPB3 220 aa14.12□□□□□ -0.15
SRRM1-217ENST00000490543 SCUBE2Q9NQ36 999 aa14.12□□□□□ -0.15
SRRM1-217ENST00000490543 NOS1P29475 1434 aa14.12□□□□□ -0.15
SRRM1-217ENST00000490543 LMTK2Q8IWU2 1503 aa14.11□□□□□ -0.15
SRRM1-217ENST00000490543 CROCC2H7BZ55 1655 aa14.11□□□□□ -0.15
SRRM1-217ENST00000490543 PTPN23Q9H3S7 1636 aa14.11□□□□□ -0.15
SRRM1-217ENST00000490543 NKTRP30414 1462 aaKnown RBP14.11□□□□□ -0.15
SRRM1-217ENST00000490543 JCADQ9P266 1359 aa14.1□□□□□ -0.15
SRRM1-217ENST00000490543 NWD1Q149M9 1564 aa14.1□□□□□ -0.15
SRRM1-217ENST00000490543 ECM2O94769 699 aaPredicted RBP14.1□□□□□ -0.15
SRRM1-217ENST00000490543 SLC52A1Q9NWF4 448 aa14.1□□□□□ -0.15
SRRM1-217ENST00000490543 PHLPP1O60346 1717 aa14.1□□□□□ -0.15
SRRM1-217ENST00000490543 ADGRB3O60242 1522 aa14.09□□□□□ -0.15
SRRM1-217ENST00000490543 ANKRD30AQ9BXX3 1397 aa14.09□□□□□ -0.15
SRRM1-217ENST00000490543 VGFO15240 615 aaPredicted RBP14.07□□□□□ -0.16
SRRM1-217ENST00000490543 PDCD7Q8N8D1 485 aaKnown RBP14.07□□□□□ -0.16
SRRM1-217ENST00000490543 LRP6O75581 1613 aa14.07□□□□□ -0.16
SRRM1-217ENST00000490543 ZFYVE9O95405 1425 aa14.07□□□□□ -0.16
SRRM1-217ENST00000490543 FGD6Q6ZV73 1430 aa14.07□□□□□ -0.16
SRRM1-217ENST00000490543 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.06□□□□□ -0.16
SRRM1-217ENST00000490543 UPF1Q92900 1129 aaKnown RBP eCLIP14.06□□□□□ -0.16
SRRM1-217ENST00000490543 ZFP91Q96JP5 570 aaPredicted RBP14.06□□□□□ -0.16
SRRM1-217ENST00000490543 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.06□□□□□ -0.164e-7■■□□□ 14.5
SRRM1-217ENST00000490543 PLEKHG1Q9ULL1 1385 aa14.06□□□□□ -0.16
SRRM1-217ENST00000490543 COL16A1Q07092 1604 aaPredicted RBP14.05□□□□□ -0.16
SRRM1-217ENST00000490543 PPP1R15AO75807 674 aaPredicted RBP14.05□□□□□ -0.16
SRRM1-217ENST00000490543 NUTM2DQ5VT03 806 aaPredicted RBP14.05□□□□□ -0.16
SRRM1-217ENST00000490543 TRIM52Q96A61 297 aa14.05□□□□□ -0.16
SRRM1-217ENST00000490543 TBX22Q9Y458 520 aa14.05□□□□□ -0.16
SRRM1-217ENST00000490543 CHD2O14647 1828 aaKnown RBP14.05□□□□□ -0.16
SRRM1-217ENST00000490543 RIMS2Q9UQ26 1411 aa14.05□□□□□ -0.16
SRRM1-217ENST00000490543 C14orf37Q86TY3 774 aa14.04□□□□□ -0.16
SRRM1-217ENST00000490543 MYO5BQ9ULV0 1848 aa14.04□□□□□ -0.16
SRRM1-217ENST00000490543 MEX3CQ5U5Q3 659 aaKnown RBP14.03□□□□□ -0.16
SRRM1-217ENST00000490543 SPATA31A6Q5VVP1 1343 aa14.03□□□□□ -0.16
SRRM1-217ENST00000490543 HDGFP51858 240 aaKnown RBP14.02□□□□□ -0.17
SRRM1-217ENST00000490543 ZNF772Q68DY9 489 aaPredicted RBP14.02□□□□□ -0.17
SRRM1-217ENST00000490543 CHGAP10645 457 aaKnown RBP14.01□□□□□ -0.17
SRRM1-217ENST00000490543 C19orf44Q9H6X5 657 aa14.01□□□□□ -0.17
SRRM1-217ENST00000490543 TMEM131LA2VDJ0 1609 aa14.01□□□□□ -0.17
SRRM1-217ENST00000490543 ADAMTS13Q76LX8 1427 aa14□□□□□ -0.17
SRRM1-217ENST00000490543 NCOA3Q9Y6Q9 1424 aa14□□□□□ -0.17
SRRM1-217ENST00000490543 RGL2O15211 777 aa14□□□□□ -0.17
SRRM1-217ENST00000490543 ATF3P18847 181 aa14□□□□□ -0.17
SRRM1-217ENST00000490543 CADPS2Q86UW7 1296 aa14□□□□□ -0.17
SRRM1-217ENST00000490543 EFCAB3Q8N7B9 438 aa14□□□□□ -0.17
SRRM1-217ENST00000490543 RPRD2Q5VT52 1461 aaKnown RBP13.99□□□□□ -0.17
SRRM1-217ENST00000490543 ANKRD50Q9ULJ7 1429 aa13.99□□□□□ -0.17
SRRM1-217ENST00000490543 GCC2Q8IWJ2 1684 aa13.99□□□□□ -0.17
SRRM1-217ENST00000490543 NUTM2BA6NNL0 878 aaPredicted RBP13.99□□□□□ -0.17
SRRM1-217ENST00000490543 NUTM2EB1AL46 878 aaPredicted RBP13.99□□□□□ -0.17
SRRM1-217ENST00000490543 NUTM2AQ8IVF1 878 aaPredicted RBP13.99□□□□□ -0.17
SRRM1-217ENST00000490543 ADGRL2O95490 1459 aa13.99□□□□□ -0.17
SRRM1-217ENST00000490543 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.98□□□□□ -0.17
SRRM1-217ENST00000490543 RXRBP28702 533 aa13.98□□□□□ -0.17
SRRM1-217ENST00000490543 FAM50AQ14320 339 aaKnown RBP13.98□□□□□ -0.17
SRRM1-217ENST00000490543 BRINP3Q76B58 766 aa13.98□□□□□ -0.17
SRRM1-217ENST00000490543 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.98□□□□□ -0.17
SRRM1-217ENST00000490543 AHDC1Q5TGY3 1603 aaPredicted RBP13.97□□□□□ -0.17
SRRM1-217ENST00000490543 TAOK2Q9UL54 1235 aa13.97□□□□□ -0.17
SRRM1-217ENST00000490543 AMOTL2Q9Y2J4 779 aa13.97□□□□□ -0.17
SRRM1-217ENST00000490543 PTPRUQ92729 1446 aa13.96□□□□□ -0.18
SRRM1-217ENST00000490543 SHPRHQ149N8 1683 aa13.95□□□□□ -0.18
SRRM1-217ENST00000490543 AFF2P51816 1311 aa13.94□□□□□ -0.18
SRRM1-217ENST00000490543 DIP2AQ14689 1571 aa13.94□□□□□ -0.18
SRRM1-217ENST00000490543 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
SRRM1-217ENST00000490543 PIK3R4Q99570 1358 aa13.94□□□□□ -0.18
SRRM1-217ENST00000490543 BCL11BQ9C0K0 894 aaPredicted RBP13.93□□□□□ -0.18
SRRM1-217ENST00000490543 DDX17Q92841 729 aaKnown RBP13.92□□□□□ -0.18
SRRM1-217ENST00000490543 L3MBTL3Q96JM7 780 aaPredicted RBP13.92□□□□□ -0.18
SRRM1-217ENST00000490543 SLAIN1Q8ND83 568 aa13.91□□□□□ -0.18
SRRM1-217ENST00000490543 E9PCH4 1651 aa13.91□□□□□ -0.18
SRRM1-217ENST00000490543 CDK12Q9NYV4 1490 aaPredicted RBP13.9□□□□□ -0.18
SRRM1-217ENST00000490543 SETD5Q9C0A6 1442 aa13.9□□□□□ -0.19
SRRM1-217ENST00000490543 C8orf37Q96NL8 207 aa13.89□□□□□ -0.19
SRRM1-217ENST00000490543 QTRT2Q9H974 415 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms