RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 AFF2P51816 1311 aa13.33□□□□□ -0.28
SKAP2-207ENST00000490456 RGS12O14924 1447 aa13.32□□□□□ -0.28
SKAP2-207ENST00000490456 ATF3P18847 181 aa13.32□□□□□ -0.28
SKAP2-207ENST00000490456 C19orf44Q9H6X5 657 aa13.32□□□□□ -0.28
SKAP2-207ENST00000490456 NHSL1Q5SYE7 1610 aa13.31□□□□□ -0.28
SKAP2-207ENST00000490456 ADGRL2O95490 1459 aa13.31□□□□□ -0.28
SKAP2-207ENST00000490456 RPRD2Q5VT52 1461 aaKnown RBP13.31□□□□□ -0.28
SKAP2-207ENST00000490456 NUTM2BA6NNL0 878 aaPredicted RBP13.31□□□□□ -0.28
SKAP2-207ENST00000490456 NUTM2EB1AL46 878 aaPredicted RBP13.31□□□□□ -0.28
SKAP2-207ENST00000490456 PPP1R15AO75807 674 aaPredicted RBP13.31□□□□□ -0.28
SKAP2-207ENST00000490456 NUTM2AQ8IVF1 878 aaPredicted RBP13.31□□□□□ -0.28
SKAP2-207ENST00000490456 TBX22Q9Y458 520 aa13.31□□□□□ -0.28
SKAP2-207ENST00000490456 TMEM131LA2VDJ0 1609 aa13.31□□□□□ -0.28
SKAP2-207ENST00000490456 PIK3R4Q99570 1358 aa13.31□□□□□ -0.28
SKAP2-207ENST00000490456 RIMS2Q9UQ26 1411 aa13.3□□□□□ -0.28
SKAP2-207ENST00000490456 SPDYE4A6NLX3 237 aa13.3□□□□□ -0.28
SKAP2-207ENST00000490456 RBM6P78332 1123 aaKnown RBP13.3□□□□□ -0.28
SKAP2-207ENST00000490456 ROCK1Q13464 1354 aa13.3□□□□□ -0.28
SKAP2-207ENST00000490456 DCCP43146 1447 aa13.3□□□□□ -0.28
SKAP2-207ENST00000490456 SETD5Q9C0A6 1442 aa13.3□□□□□ -0.28
SKAP2-207ENST00000490456 ASXL1Q8IXJ9 1541 aa13.29□□□□□ -0.28
SKAP2-207ENST00000490456 BRINP3Q76B58 766 aa13.28□□□□□ -0.28
SKAP2-207ENST00000490456 ATAD2Q6PL18 1390 aa13.28□□□□□ -0.28
SKAP2-207ENST00000490456 NUTM2DQ5VT03 806 aaPredicted RBP13.27□□□□□ -0.29
SKAP2-207ENST00000490456 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.27□□□□□ -0.29
SKAP2-207ENST00000490456 TRPM2O94759 1503 aa13.27□□□□□ -0.29
SKAP2-207ENST00000490456 ADAMTS13Q76LX8 1427 aa13.26□□□□□ -0.29
SKAP2-207ENST00000490456 QTRT2Q9H974 415 aaKnown RBP13.26□□□□□ -0.29
SKAP2-207ENST00000490456 ANKRD50Q9ULJ7 1429 aa13.26□□□□□ -0.29
SKAP2-207ENST00000490456 LRRC59Q96AG4 307 aaKnown RBP13.25□□□□□ -0.29
SKAP2-207ENST00000490456 NGLY1Q96IV0 654 aa13.25□□□□□ -0.29
SKAP2-207ENST00000490456 GALR2O43603 387 aaPredicted RBP13.24□□□□□ -0.29
SKAP2-207ENST00000490456 C8orf37Q96NL8 207 aa13.24□□□□□ -0.29
SKAP2-207ENST00000490456 PLSCR2Q9NRY7 297 aa13.23□□□□□ -0.29
SKAP2-207ENST00000490456 XRN1Q8IZH2 1706 aaKnown RBP13.22□□□□□ -0.29
SKAP2-207ENST00000490456 MST1RQ04912 1400 aa13.22□□□□□ -0.29
SKAP2-207ENST00000490456 PNPLA6Q8IY17 1366 aa13.21□□□□□ -0.29
SKAP2-207ENST00000490456 UNC13BO14795 1591 aa13.21□□□□□ -0.29
SKAP2-207ENST00000490456 SETBP1Q9Y6X0 1596 aa13.21□□□□□ -0.29
SKAP2-207ENST00000490456 HFM1A2PYH4 1435 aa13.21□□□□□ -0.3
SKAP2-207ENST00000490456 NAIPQ13075 1403 aa13.21□□□□□ -0.3
SKAP2-207ENST00000490456 AMOTL2Q9Y2J4 779 aa13.2□□□□□ -0.3
SKAP2-207ENST00000490456 EP400Q96L91 3159 aa13.2□□□□□ -0.3
SKAP2-207ENST00000490456 LAMC1P11047 1609 aa13.19□□□□□ -0.3
SKAP2-207ENST00000490456 PTPRUQ92729 1446 aa13.19□□□□□ -0.3
SKAP2-207ENST00000490456 CCDC125Q86Z20 511 aa13.18□□□□□ -0.3
SKAP2-207ENST00000490456 E9PCH4 1651 aa13.18□□□□□ -0.3
SKAP2-207ENST00000490456 NALCNQ8IZF0 1738 aa13.17□□□□□ -0.3
SKAP2-207ENST00000490456 CHGAP10645 457 aaKnown RBP13.17□□□□□ -0.3
SKAP2-207ENST00000490456 PHF12Q96QT6 1004 aa13.16□□□□□ -0.3
SKAP2-207ENST00000490456 TRPC5Q9UL62 973 aaPredicted RBP13.16□□□□□ -0.3
SKAP2-207ENST00000490456 IQGAP3Q86VI3 1631 aa13.16□□□□□ -0.3
SKAP2-207ENST00000490456 NRXN3Q9Y4C0 1643 aa13.16□□□□□ -0.3
SKAP2-207ENST00000490456 PTCH1Q13635 1447 aa13.15□□□□□ -0.3
SKAP2-207ENST00000490456 ADGRL3Q9HAR2 1447 aa13.15□□□□□ -0.3
SKAP2-207ENST00000490456 USP21Q9UK80 565 aa13.15□□□□□ -0.3
SKAP2-207ENST00000490456 NUP155O75694 1391 aa13.15□□□□□ -0.3
SKAP2-207ENST00000490456 MARF1Q9Y4F3 1742 aaKnown RBP13.14□□□□□ -0.31
SKAP2-207ENST00000490456 ADAMTS2O95450 1211 aa13.14□□□□□ -0.31
SKAP2-207ENST00000490456 ATRNO75882 1429 aa13.13□□□□□ -0.31
SKAP2-207ENST00000490456 LRP5O75197 1615 aa13.13□□□□□ -0.31
SKAP2-207ENST00000490456 COL22A1Q8NFW1 1626 aaPredicted RBP13.13□□□□□ -0.31
SKAP2-207ENST00000490456 TRIM26Q12899 539 aaPredicted RBP13.13□□□□□ -0.31
SKAP2-207ENST00000490456 FNBP4Q8N3X1 1017 aaPredicted RBP13.12□□□□□ -0.31
SKAP2-207ENST00000490456 DDX17Q92841 729 aaKnown RBP13.11□□□□□ -0.31
SKAP2-207ENST00000490456 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.1□□□□□ -0.31
SKAP2-207ENST00000490456 C1orf167Q5SNV9 1468 aa13.1□□□□□ -0.31
SKAP2-207ENST00000490456 RAB3GAP2Q9H2M9 1393 aa13.09□□□□□ -0.31
SKAP2-207ENST00000490456 SPHKAPQ2M3C7 1700 aa13.09□□□□□ -0.31
SKAP2-207ENST00000490456 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
SKAP2-207ENST00000490456 BLMP54132 1417 aaPredicted RBP13.08□□□□□ -0.32
SKAP2-207ENST00000490456 OTUD5Q96G74 571 aa13.08□□□□□ -0.32
SKAP2-207ENST00000490456 METP08581 1390 aa13.07□□□□□ -0.32
SKAP2-207ENST00000490456 MYOM2P54296 1465 aa13.06□□□□□ -0.32
SKAP2-207ENST00000490456 BCL9LQ86UU0 1499 aa13.05□□□□□ -0.32
SKAP2-207ENST00000490456 ACIN1Q9UKV3 1341 aaKnown RBP13.05□□□□□ -0.32
SKAP2-207ENST00000490456 BRWD3Q6RI45 1802 aa13.04□□□□□ -0.32
SKAP2-207ENST00000490456 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
SKAP2-207ENST00000490456 HRCP23327 699 aa13.03□□□□□ -0.32
SKAP2-207ENST00000490456 SF3B2Q13435 895 aaKnown RBP13.02□□□□□ -0.33
SKAP2-207ENST00000490456 ORAI2Q96SN7 254 aa13.02□□□□□ -0.33
SKAP2-207ENST00000490456 MPHOSPH9Q99550 1183 aa13.02□□□□□ -0.33
SKAP2-207ENST00000490456 GLI3P10071 1580 aa13.02□□□□□ -0.33
SKAP2-207ENST00000490456 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
SKAP2-207ENST00000490456 ZNF326Q5BKZ1 582 aaKnown RBP13.01□□□□□ -0.33
SKAP2-207ENST00000490456 SLC39A7Q92504 469 aa13.01□□□□□ -0.33
SKAP2-207ENST00000490456 NEXMIFQ5QGS0 1516 aa13.01□□□□□ -0.33
SKAP2-207ENST00000490456 KIF1BO60333 1816 aa13□□□□□ -0.33
SKAP2-207ENST00000490456 PRAG1Q86YV5 1406 aa13□□□□□ -0.33
SKAP2-207ENST00000490456 NPHP3Q7Z494 1330 aa13□□□□□ -0.33
SKAP2-207ENST00000490456 RALGAPBQ86X10 1494 aa12.99□□□□□ -0.33
SKAP2-207ENST00000490456 POTEB2H3BUK9 544 aa12.99□□□□□ -0.33
SKAP2-207ENST00000490456 C7P10643 843 aa12.99□□□□□ -0.33
SKAP2-207ENST00000490456 METRNQ9UJH8 293 aa12.99□□□□□ -0.33
SKAP2-207ENST00000490456 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
SKAP2-207ENST00000490456 PXDNQ92626 1479 aa12.98□□□□□ -0.33
SKAP2-207ENST00000490456 MAMSTRQ6ZN01 415 aa12.98□□□□□ -0.33
SKAP2-207ENST00000490456 DEFB132Q7Z7B7 95 aa12.98□□□□□ -0.33
SKAP2-207ENST00000490456 MS4A3Q96HJ5 214 aa12.98□□□□□ -0.33
SKAP2-207ENST00000490456 PCGF6Q9BYE7 350 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms