RNA–Protein interactions for RNA: ENST00000489917.1

SPATA9-206, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-206ENST00000489917 TBC1D2Q9BYX2 928 aa8.59□□□□□ -1.03
SPATA9-206ENST00000489917 PRDM9Q9NQV7 894 aa8.59□□□□□ -1.03
SPATA9-206ENST00000489917 SHROOM4Q9ULL8 1493 aa8.58□□□□□ -1.04
SPATA9-206ENST00000489917 FDX1P10109 184 aa8.58□□□□□ -1.04
SPATA9-206ENST00000489917 ANKLE1Q8NAG6 615 aa8.58□□□□□ -1.04
SPATA9-206ENST00000489917 SYMPKQ92797 1274 aaKnown RBP8.58□□□□□ -1.04
SPATA9-206ENST00000489917 PRKD2Q9BZL6 878 aa8.58□□□□□ -1.04
SPATA9-206ENST00000489917 GPBP1L1Q9HC44 474 aaPredicted RBP8.58□□□□□ -1.04
SPATA9-206ENST00000489917 PCDHGC3Q9UN70 934 aa8.58□□□□□ -1.04
SPATA9-206ENST00000489917 MSS51Q4VC12 460 aa8.57□□□□□ -1.04
SPATA9-206ENST00000489917 USB1Q9BQ65 265 aaKnown RBP8.57□□□□□ -1.04
SPATA9-206ENST00000489917 DIXDC1Q155Q3 683 aa8.56□□□□□ -1.04
SPATA9-206ENST00000489917 EMID1Q96A84 441 aaPredicted RBP8.56□□□□□ -1.04
SPATA9-206ENST00000489917 KDM4CQ9H3R0 1056 aa8.56□□□□□ -1.04
SPATA9-206ENST00000489917 V9GY48 417 aaPredicted RBP8.55□□□□□ -1.04
SPATA9-206ENST00000489917 PLA2G2CQ5R387 149 aa8.54□□□□□ -1.04
SPATA9-206ENST00000489917 RSBN1LQ6PCB5 846 aaPredicted RBP8.54□□□□□ -1.04
SPATA9-206ENST00000489917 C6orf229H3BNL8 230 aa8.53□□□□□ -1.04
SPATA9-206ENST00000489917 IRX2Q9BZI1 471 aaPredicted RBP8.53□□□□□ -1.04
SPATA9-206ENST00000489917 FCF1Q9Y324 198 aaKnown RBP8.53□□□□□ -1.04
SPATA9-206ENST00000489917 SCRIBQ14160 1630 aa8.52□□□□□ -1.05
SPATA9-206ENST00000489917 SPTLC1O15269 473 aa8.52□□□□□ -1.05
SPATA9-206ENST00000489917 GJA5P36382 358 aa8.52□□□□□ -1.05
SPATA9-206ENST00000489917 SLC19A1P41440 591 aa8.52□□□□□ -1.05
SPATA9-206ENST00000489917 MMP16P51512 607 aa8.52□□□□□ -1.05
SPATA9-206ENST00000489917 MYSM1Q5VVJ2 828 aa8.52□□□□□ -1.05
SPATA9-206ENST00000489917 LIAT1Q6ZQX7 453 aa8.52□□□□□ -1.05
SPATA9-206ENST00000489917 RIC3Q7Z5B4 369 aa8.52□□□□□ -1.05
SPATA9-206ENST00000489917 RETREG3Q86VR2 466 aa8.52□□□□□ -1.05
SPATA9-206ENST00000489917 DXOO77932 396 aaKnown RBP8.51□□□□□ -1.05
SPATA9-206ENST00000489917 FAM117AQ9C073 453 aa8.51□□□□□ -1.05
SPATA9-206ENST00000489917 PCDHB15Q9Y5E8 787 aa8.51□□□□□ -1.05
SPATA9-206ENST00000489917 MTMR2Q13614 643 aa8.5□□□□□ -1.05
SPATA9-206ENST00000489917 LIMD1Q9UGP4 676 aa8.5□□□□□ -1.05
SPATA9-206ENST00000489917 SPRYD7Q5W111 196 aa8.49□□□□□ -1.05
SPATA9-206ENST00000489917 JUNDP17535 347 aa8.48□□□□□ -1.05
SPATA9-206ENST00000489917 NEUROD2Q15784 382 aa8.48□□□□□ -1.05
SPATA9-206ENST00000489917 PLEKHG3A1L390 1219 aa8.47□□□□□ -1.05
SPATA9-206ENST00000489917 HRCP23327 699 aa8.47□□□□□ -1.05
SPATA9-206ENST00000489917 CSPP1Q1MSJ5 1256 aa8.47□□□□□ -1.05
SPATA9-206ENST00000489917 DDRGK1Q96HY6 314 aa8.47□□□□□ -1.05
SPATA9-206ENST00000489917 RSPH6AQ9H0K4 717 aa8.47□□□□□ -1.05
SPATA9-206ENST00000489917 SPDYE5A6NIY4 337 aa8.46□□□□□ -1.06
SPATA9-206ENST00000489917 CLK2P49760 499 aaKnown RBP8.46□□□□□ -1.06
SPATA9-206ENST00000489917 PRPF38BQ5VTL8 546 aaKnown RBP8.46□□□□□ -1.06
SPATA9-206ENST00000489917 ZNF598Q86UK7 904 aaKnown RBP8.46□□□□□ -1.06
SPATA9-206ENST00000489917 PRR7Q8TB68 274 aa8.46□□□□□ -1.06
SPATA9-206ENST00000489917 CABLES1Q8TDN4 633 aa8.46□□□□□ -1.06
SPATA9-206ENST00000489917 ZBTB3Q9H5J0 574 aa8.46□□□□□ -1.06
SPATA9-206ENST00000489917 POLR3EQ9NVU0 708 aa8.46□□□□□ -1.06
SPATA9-206ENST00000489917 UNC13AQ9UPW8 1703 aa8.46□□□□□ -1.06
SPATA9-206ENST00000489917 RPIAP49247 311 aa8.45□□□□□ -1.06
SPATA9-206ENST00000489917 BRPF1P55201 1214 aaPredicted RBP8.45□□□□□ -1.06
SPATA9-206ENST00000489917 QPCTQ16769 361 aa8.45□□□□□ -1.06
SPATA9-206ENST00000489917 TUSC1Q2TAM9 212 aa8.45□□□□□ -1.06
SPATA9-206ENST00000489917 CCDC24Q8N4L8 307 aa8.45□□□□□ -1.06
SPATA9-206ENST00000489917 ZNF697Q5TEC3 545 aa8.44□□□□□ -1.06
SPATA9-206ENST00000489917 CFAP99D6REC4 459 aa8.43□□□□□ -1.06
SPATA9-206ENST00000489917 LILRB3O75022 631 aa8.43□□□□□ -1.06
SPATA9-206ENST00000489917 SH3D19Q5HYK7 790 aa8.43□□□□□ -1.06
SPATA9-206ENST00000489917 NUDT12Q9BQG2 462 aa8.43□□□□□ -1.06
SPATA9-206ENST00000489917 ZBTB24O43167 697 aaPredicted RBP8.42□□□□□ -1.06
SPATA9-206ENST00000489917 GFRA3O60609 400 aa8.42□□□□□ -1.06
SPATA9-206ENST00000489917 SKIV2LQ15477 1246 aaKnown RBP8.42□□□□□ -1.06
SPATA9-206ENST00000489917 DESI1Q6ICB0 168 aa8.42□□□□□ -1.06
SPATA9-206ENST00000489917 TRIM67Q6ZTA4 783 aa8.42□□□□□ -1.06
SPATA9-206ENST00000489917 NUTM2BA6NNL0 878 aaPredicted RBP8.41□□□□□ -1.06
SPATA9-206ENST00000489917 NUTM2EB1AL46 878 aaPredicted RBP8.41□□□□□ -1.06
SPATA9-206ENST00000489917 CD2BP2O95400 341 aaKnown RBP8.41□□□□□ -1.06
SPATA9-206ENST00000489917 LAPTM4AQ15012 233 aa8.41□□□□□ -1.06
SPATA9-206ENST00000489917 PTPRNQ16849 979 aa8.41□□□□□ -1.06
SPATA9-206ENST00000489917 NUTM2DQ5VT03 806 aaPredicted RBP8.41□□□□□ -1.06
SPATA9-206ENST00000489917 NUTM2AQ8IVF1 878 aaPredicted RBP8.41□□□□□ -1.06
SPATA9-206ENST00000489917 PDZRN3Q9UPQ7 1066 aa8.41□□□□□ -1.06
SPATA9-206ENST00000489917 TRIM32Q13049 653 aa8.4□□□□□ -1.06
SPATA9-206ENST00000489917 RTL5Q5HYW3 569 aaPredicted RBP8.4□□□□□ -1.06
SPATA9-206ENST00000489917 PTCRAQ6ISU1 281 aaPredicted RBP8.4□□□□□ -1.06
SPATA9-206ENST00000489917 PROCA1Q8NCQ7 364 aaPredicted RBP8.4□□□□□ -1.06
SPATA9-206ENST00000489917 GDF9O60383 454 aa8.39□□□□□ -1.07
SPATA9-206ENST00000489917 CCNYL3P0C7X3 344 aa8.39□□□□□ -1.07
SPATA9-206ENST00000489917 IL27Q8NEV9 243 aa8.39□□□□□ -1.07
SPATA9-206ENST00000489917 NRG2O14511 850 aaPredicted RBP8.38□□□□□ -1.07
SPATA9-206ENST00000489917 FBXO31Q5XUX0 539 aaPredicted RBP8.38□□□□□ -1.07
SPATA9-206ENST00000489917 LYPD8Q6UX82 237 aa8.38□□□□□ -1.07
SPATA9-206ENST00000489917 Q6ZNB5 142 aa8.38□□□□□ -1.07
SPATA9-206ENST00000489917 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.38□□□□□ -1.07
SPATA9-206ENST00000489917 EVA1BQ9NVM1 165 aa8.38□□□□□ -1.07
SPATA9-206ENST00000489917 PKD2L1Q9P0L9 805 aa8.38□□□□□ -1.07
SPATA9-206ENST00000489917 TNFRSF10AO00220 468 aa8.37□□□□□ -1.07
SPATA9-206ENST00000489917 PRR20EP86478 221 aa8.37□□□□□ -1.07
SPATA9-206ENST00000489917 PRR20CP86479 221 aa8.37□□□□□ -1.07
SPATA9-206ENST00000489917 PRR20DP86480 221 aa8.37□□□□□ -1.07
SPATA9-206ENST00000489917 PRR20BP86481 221 aa8.37□□□□□ -1.07
SPATA9-206ENST00000489917 PRR20AP86496 221 aa8.37□□□□□ -1.07
SPATA9-206ENST00000489917 FOXC1Q12948 553 aa8.37□□□□□ -1.07
SPATA9-206ENST00000489917 TSC1Q92574 1164 aa8.37□□□□□ -1.07
SPATA9-206ENST00000489917 PER1O15534 1290 aaPredicted RBP8.36□□□□□ -1.07
SPATA9-206ENST00000489917 KCNH2Q12809 1159 aa8.36□□□□□ -1.07
SPATA9-206ENST00000489917 TMEM132AQ24JP5 1023 aa8.36□□□□□ -1.07
SPATA9-206ENST00000489917 ATP1B4Q9UN42 357 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms