RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 GJA5P36382 358 aa11.81□□□□□ -0.52
CCDC39-206ENST00000489868 CLK2P49760 499 aaKnown RBP11.81□□□□□ -0.52
CCDC39-206ENST00000489868 PROCA1Q8NCQ7 364 aaPredicted RBP11.81□□□□□ -0.52
CCDC39-206ENST00000489868 SALL2Q9Y467 1007 aaPredicted RBP11.81□□□□□ -0.52
CCDC39-206ENST00000489868 SKIV2LQ15477 1246 aaKnown RBP11.8□□□□□ -0.52
CCDC39-206ENST00000489868 QPCTQ16769 361 aa11.8□□□□□ -0.52
CCDC39-206ENST00000489868 CSPP1Q1MSJ5 1256 aa11.8□□□□□ -0.52
CCDC39-206ENST00000489868 FAM160A2Q8N612 972 aaPredicted RBP11.8□□□□□ -0.52
CCDC39-206ENST00000489868 SPSB2Q99619 263 aa11.8□□□□□ -0.52
CCDC39-206ENST00000489868 FMNL1O95466 1100 aaPredicted RBP11.79□□□□□ -0.52
CCDC39-206ENST00000489868 ADH1BP00325 375 aa11.79□□□□□ -0.52
CCDC39-206ENST00000489868 CABLES1Q8TDN4 633 aa11.79□□□□□ -0.52
CCDC39-206ENST00000489868 Q3C1V9 767 aa11.78□□□□□ -0.52
CCDC39-206ENST00000489868 PRDM9Q9NQV7 894 aa11.78□□□□□ -0.52
CCDC39-206ENST00000489868 C6orf229H3BNL8 230 aa11.76□□□□□ -0.53
CCDC39-206ENST00000489868 HRCP23327 699 aa11.76□□□□□ -0.53
CCDC39-206ENST00000489868 TUSC1Q2TAM9 212 aa11.76□□□□□ -0.53
CCDC39-206ENST00000489868 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.76□□□□□ -0.53
CCDC39-206ENST00000489868 GOPCQ9HD26 462 aa11.76□□□□□ -0.53
CCDC39-206ENST00000489868 S1PR4O95977 384 aa11.75□□□□□ -0.53
CCDC39-206ENST00000489868 USB1Q9BQ65 265 aaKnown RBP11.75□□□□□ -0.53
CCDC39-206ENST00000489868 LILRB3O75022 631 aa11.74□□□□□ -0.53
CCDC39-206ENST00000489868 MTMR2Q13614 643 aa11.74□□□□□ -0.53
CCDC39-206ENST00000489868 PPP1R18Q6NYC8 613 aa11.74□□□□□ -0.53
CCDC39-206ENST00000489868 A0A0G2JS52 829 aa11.73□□□□□ -0.53
CCDC39-206ENST00000489868 RTL5Q5HYW3 569 aaPredicted RBP11.73□□□□□ -0.53
CCDC39-206ENST00000489868 MSS51Q4VC12 460 aa11.72□□□□□ -0.53
CCDC39-206ENST00000489868 PRPF38BQ5VTL8 546 aaKnown RBP11.72□□□□□ -0.53
CCDC39-206ENST00000489868 RETREG3Q86VR2 466 aa11.72□□□□□ -0.53
CCDC39-206ENST00000489868 SLC6A16Q9GZN6 736 aa11.72□□□□□ -0.53
CCDC39-206ENST00000489868 ZBTB3Q9H5J0 574 aa11.72□□□□□ -0.53
CCDC39-206ENST00000489868 CFAP99D6REC4 459 aa11.71□□□□□ -0.53
CCDC39-206ENST00000489868 PPEF1O14829 653 aaPredicted RBP11.71□□□□□ -0.53
CCDC39-206ENST00000489868 PRR7Q8TB68 274 aa11.7□□□□□ -0.54
CCDC39-206ENST00000489868 RNF223E7ERA6 249 aa11.69□□□□□ -0.54
CCDC39-206ENST00000489868 MMP16P51512 607 aa11.68□□□□□ -0.54
CCDC39-206ENST00000489868 PCMTD1Q96MG8 357 aaPredicted RBP11.68□□□□□ -0.54
CCDC39-206ENST00000489868 NUTM2BA6NNL0 878 aaPredicted RBP11.67□□□□□ -0.54
CCDC39-206ENST00000489868 NUTM2EB1AL46 878 aaPredicted RBP11.67□□□□□ -0.54
CCDC39-206ENST00000489868 DXOO77932 396 aaKnown RBP11.67□□□□□ -0.54
CCDC39-206ENST00000489868 NUTM2DQ5VT03 806 aaPredicted RBP11.67□□□□□ -0.54
CCDC39-206ENST00000489868 NUTM2AQ8IVF1 878 aaPredicted RBP11.67□□□□□ -0.54
CCDC39-206ENST00000489868 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.67□□□□□ -0.54
CCDC39-206ENST00000489868 SPDYE5A6NIY4 337 aa11.66□□□□□ -0.54
CCDC39-206ENST00000489868 PPP2R2DQ66LE6 453 aa11.66□□□□□ -0.54
CCDC39-206ENST00000489868 JUNDP17535 347 aa11.65□□□□□ -0.54
CCDC39-206ENST00000489868 PLA2G2CQ5R387 149 aa11.65□□□□□ -0.54
CCDC39-206ENST00000489868 ATP1B4Q9UN42 357 aaPredicted RBP11.65□□□□□ -0.54
CCDC39-206ENST00000489868 EMID1Q96A84 441 aaPredicted RBP11.64□□□□□ -0.55
CCDC39-206ENST00000489868 PER1O15534 1290 aaPredicted RBP11.62□□□□□ -0.55
CCDC39-206ENST00000489868 TMEM132AQ24JP5 1023 aa11.62□□□□□ -0.55
CCDC39-206ENST00000489868 FCF1Q9Y324 198 aaKnown RBP11.62□□□□□ -0.55
CCDC39-206ENST00000489868 GGCXP38435 758 aa11.61□□□□□ -0.55
CCDC39-206ENST00000489868 RFC5P40937 340 aa11.61□□□□□ -0.55
CCDC39-206ENST00000489868 DESI1Q6ICB0 168 aa11.61□□□□□ -0.55
CCDC39-206ENST00000489868 ANKLE1Q8NAG6 615 aa11.61□□□□□ -0.55
CCDC39-206ENST00000489868 TSC1Q92574 1164 aa11.6□□□□□ -0.55
CCDC39-206ENST00000489868 CTDSPL2Q05D32 466 aa11.59□□□□□ -0.55
CCDC39-206ENST00000489868 LYPD8Q6UX82 237 aa11.58□□□□□ -0.56
CCDC39-206ENST00000489868 PTPRNQ16849 979 aa11.56□□□□□ -0.56
CCDC39-206ENST00000489868 NUDT12Q9BQG2 462 aa11.56□□□□□ -0.56
CCDC39-206ENST00000489868 PTCRAQ6ISU1 281 aaPredicted RBP11.55□□□□□ -0.56
CCDC39-206ENST00000489868 LIAT1Q6ZQX7 453 aa11.55□□□□□ -0.56
CCDC39-206ENST00000489868 AP1G2O75843 785 aa11.54□□□□□ -0.56
CCDC39-206ENST00000489868 CCDC24Q8N4L8 307 aa11.54□□□□□ -0.56
CCDC39-206ENST00000489868 HELBQ8NG08 1087 aaPredicted RBP11.54□□□□□ -0.56
CCDC39-206ENST00000489868 LRRN4Q8WUT4 740 aa11.54□□□□□ -0.56
CCDC39-206ENST00000489868 CCNYL3P0C7X3 344 aa11.53□□□□□ -0.56
CCDC39-206ENST00000489868 F12P00748 615 aaPredicted RBP11.52□□□□□ -0.57
CCDC39-206ENST00000489868 EVA1BQ9NVM1 165 aa11.52□□□□□ -0.57
CCDC39-206ENST00000489868 MAP10Q9P2G4 905 aa11.52□□□□□ -0.57
CCDC39-206ENST00000489868 USP17L8P0C7I0 530 aa11.51□□□□□ -0.57
CCDC39-206ENST00000489868 PRKD2Q9BZL6 878 aa11.51□□□□□ -0.57
CCDC39-206ENST00000489868 HMX1Q9NP08 348 aaPredicted RBP11.51□□□□□ -0.57
CCDC39-206ENST00000489868 KCNH2Q12809 1159 aa11.49□□□□□ -0.57
CCDC39-206ENST00000489868 TMEM259Q4ZIN3 620 aa11.49□□□□□ -0.57
CCDC39-206ENST00000489868 SLC19A1P41440 591 aa11.48□□□□□ -0.57
CCDC39-206ENST00000489868 EPS8L1Q8TE68 723 aa11.47□□□□□ -0.57
CCDC39-206ENST00000489868 CTHP32929 405 aa11.46□□□□□ -0.57
CCDC39-206ENST00000489868 UNC93B1Q9H1C4 597 aa11.46□□□□□ -0.57
CCDC39-206ENST00000489868 SNRKQ9NRH2 765 aa11.46□□□□□ -0.57
CCDC39-206ENST00000489868 TRIM32Q13049 653 aa11.45□□□□□ -0.58
CCDC39-206ENST00000489868 SPRYD7Q5W111 196 aa11.45□□□□□ -0.58
CCDC39-206ENST00000489868 V9GY48 417 aaPredicted RBP11.45□□□□□ -0.58
CCDC39-206ENST00000489868 RGS20O76081 388 aa11.44□□□□□ -0.58
CCDC39-206ENST00000489868 RPIAP49247 311 aa11.44□□□□□ -0.58
CCDC39-206ENST00000489868 NR6A1Q15406 480 aa11.44□□□□□ -0.58
CCDC39-206ENST00000489868 MTMR14Q8NCE2 650 aa11.44□□□□□ -0.58
CCDC39-206ENST00000489868 BANK1Q8NDB2 785 aa11.43□□□□□ -0.58
CCDC39-206ENST00000489868 GJD4Q96KN9 370 aaPredicted RBP11.43□□□□□ -0.58
CCDC39-206ENST00000489868 TRIM34Q9BYJ4 488 aa11.43□□□□□ -0.58
CCDC39-206ENST00000489868 ZBTB24O43167 697 aaPredicted RBP11.41□□□□□ -0.58
CCDC39-206ENST00000489868 SKOR1P84550 965 aa11.41□□□□□ -0.58
CCDC39-206ENST00000489868 BAP1Q92560 729 aa11.4□□□□□ -0.58
CCDC39-206ENST00000489868 LINC01559Q495D7 138 aa11.39□□□□□ -0.59
CCDC39-206ENST00000489868 ZNF697Q5TEC3 545 aa11.39□□□□□ -0.59
CCDC39-206ENST00000489868 ZNF598Q86UK7 904 aaKnown RBP11.39□□□□□ -0.59
CCDC39-206ENST00000489868 TRIM67Q6ZTA4 783 aa11.38□□□□□ -0.59
CCDC39-206ENST00000489868 CD2BP2O95400 341 aaKnown RBP11.37□□□□□ -0.59
CCDC39-206ENST00000489868 SH3BP2P78314 561 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms