RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 C14orf93Q9H972 538 aaKnown RBP17.07■□□□□ 0.32
GGPS1-207ENST00000489692 PPLO60437 1756 aa17.07■□□□□ 0.32
GGPS1-207ENST00000489692 DHX57Q6P158 1386 aaKnown RBP17.06■□□□□ 0.32
GGPS1-207ENST00000489692 ZNF772Q68DY9 489 aaPredicted RBP17.06■□□□□ 0.32
GGPS1-207ENST00000489692 DCAF11Q8TEB1 546 aa17.06■□□□□ 0.32
GGPS1-207ENST00000489692 ABCC11Q96J66 1382 aa17.05■□□□□ 0.32
GGPS1-207ENST00000489692 POGKQ9P215 609 aa17.05■□□□□ 0.32
GGPS1-207ENST00000489692 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
GGPS1-207ENST00000489692 PLEKHH1Q9ULM0 1364 aa17.04■□□□□ 0.32
GGPS1-207ENST00000489692 LRP6O75581 1613 aa17.04■□□□□ 0.32
GGPS1-207ENST00000489692 C8orf37Q96NL8 207 aa17.04■□□□□ 0.32
GGPS1-207ENST00000489692 PRAG1Q86YV5 1406 aa17.04■□□□□ 0.32
GGPS1-207ENST00000489692 ADAMTS2O95450 1211 aa17.03■□□□□ 0.32
GGPS1-207ENST00000489692 XPCQ01831 940 aaPredicted RBP17.03■□□□□ 0.32
GGPS1-207ENST00000489692 NALCNQ8IZF0 1738 aa17.03■□□□□ 0.32
GGPS1-207ENST00000489692 NPHP3Q7Z494 1330 aa17.02■□□□□ 0.32
GGPS1-207ENST00000489692 FOXO3O43524 673 aa17.02■□□□□ 0.32
GGPS1-207ENST00000489692 PRAM1Q96QH2 718 aa17.02■□□□□ 0.32
GGPS1-207ENST00000489692 PNPLA6Q8IY17 1366 aa17.02■□□□□ 0.31
GGPS1-207ENST00000489692 TECPR2O15040 1411 aa17.01■□□□□ 0.31
GGPS1-207ENST00000489692 SETD1AO15047 1707 aaKnown RBP17.01■□□□□ 0.31
GGPS1-207ENST00000489692 AFF2P51816 1311 aa17■□□□□ 0.31
GGPS1-207ENST00000489692 MYOM2P54296 1465 aa17■□□□□ 0.31
GGPS1-207ENST00000489692 NGLY1Q96IV0 654 aa17■□□□□ 0.31
GGPS1-207ENST00000489692 TRAK1Q9UPV9 953 aa17■□□□□ 0.31
GGPS1-207ENST00000489692 SOS2Q07890 1332 aaPredicted RBP16.99■□□□□ 0.31
GGPS1-207ENST00000489692 RXRBP28702 533 aa16.98■□□□□ 0.31
GGPS1-207ENST00000489692 SIRT1Q96EB6 747 aa16.98■□□□□ 0.31
GGPS1-207ENST00000489692 CLSPNQ9HAW4 1339 aa16.96■□□□□ 0.31
GGPS1-207ENST00000489692 PLEKHG5O94827 1062 aa16.96■□□□□ 0.31
GGPS1-207ENST00000489692 NRXN1Q9ULB1 1477 aa16.96■□□□□ 0.31
GGPS1-207ENST00000489692 CDC42BPGQ6DT37 1551 aa16.96■□□□□ 0.31
GGPS1-207ENST00000489692 SHPRHQ149N8 1683 aa16.95■□□□□ 0.3
GGPS1-207ENST00000489692 STAC3Q96MF2 364 aa16.95■□□□□ 0.3
GGPS1-207ENST00000489692 HIRIP3Q9BW71 556 aaPredicted RBP16.95■□□□□ 0.3
GGPS1-207ENST00000489692 NHSL1Q5SYE7 1610 aa16.94■□□□□ 0.3
GGPS1-207ENST00000489692 MINK1Q8N4C8 1332 aaPredicted RBP16.94■□□□□ 0.3
GGPS1-207ENST00000489692 IFT172Q9UG01 1749 aa16.93■□□□□ 0.3
GGPS1-207ENST00000489692 HAP1P54257 671 aaPredicted RBP16.93■□□□□ 0.3
GGPS1-207ENST00000489692 LMOD2Q6P5Q4 547 aa16.93■□□□□ 0.3
GGPS1-207ENST00000489692 KRT28Q7Z3Y7 464 aa16.93■□□□□ 0.3
GGPS1-207ENST00000489692 QTRT2Q9H974 415 aaKnown RBP16.93■□□□□ 0.3
GGPS1-207ENST00000489692 PHF8Q9UPP1 1060 aa16.93■□□□□ 0.3
GGPS1-207ENST00000489692 PSME1Q06323 249 aa16.91■□□□□ 0.3
GGPS1-207ENST00000489692 PMFBP1Q8TBY8 1022 aa16.91■□□□□ 0.3
GGPS1-207ENST00000489692 USP21Q9UK80 565 aa16.91■□□□□ 0.3
GGPS1-207ENST00000489692 LAMC1P11047 1609 aa16.89■□□□□ 0.29
GGPS1-207ENST00000489692 RBM6P78332 1123 aaKnown RBP16.88■□□□□ 0.29
GGPS1-207ENST00000489692 KNDC1Q76NI1 1749 aa16.87■□□□□ 0.29
GGPS1-207ENST00000489692 PXDNQ92626 1479 aa16.86■□□□□ 0.29
GGPS1-207ENST00000489692 NEUROD1Q13562 356 aa16.86■□□□□ 0.29
GGPS1-207ENST00000489692 TRPC5Q9UL62 973 aaPredicted RBP16.86■□□□□ 0.29
GGPS1-207ENST00000489692 SPATA31A3Q5VYP0 1347 aa16.86■□□□□ 0.29
GGPS1-207ENST00000489692 DLC1Q96QB1 1528 aa16.86■□□□□ 0.29
GGPS1-207ENST00000489692 WASLO00401 505 aaPredicted RBP16.85■□□□□ 0.29
GGPS1-207ENST00000489692 EIF3AQ14152 1382 aaKnown RBP16.85■□□□□ 0.29
GGPS1-207ENST00000489692 ADGRB1O14514 1584 aa16.85■□□□□ 0.29
GGPS1-207ENST00000489692 NGDNQ8NEJ9 315 aaKnown RBP16.84■□□□□ 0.29
GGPS1-207ENST00000489692 ANKARQ7Z5J8 1434 aa16.82■□□□□ 0.28
GGPS1-207ENST00000489692 GPRASP1Q5JY77 1395 aa16.82■□□□□ 0.28
GGPS1-207ENST00000489692 PAK3O75914 559 aaPredicted RBP16.82■□□□□ 0.28
GGPS1-207ENST00000489692 FNBP4Q8N3X1 1017 aaPredicted RBP16.82■□□□□ 0.28
GGPS1-207ENST00000489692 CABLES1Q8TDN4 633 aa16.82■□□□□ 0.28
GGPS1-207ENST00000489692 SIN3AQ96ST3 1273 aa16.81■□□□□ 0.28
GGPS1-207ENST00000489692 FMN2Q9NZ56 1722 aa16.81■□□□□ 0.28
GGPS1-207ENST00000489692 TNS3Q68CZ2 1445 aa16.8■□□□□ 0.28
GGPS1-207ENST00000489692 NBPF1Q3BBV0 1214 aa16.8■□□□□ 0.28
GGPS1-207ENST00000489692 ARHGEF10O15013 1369 aa16.79■□□□□ 0.28
GGPS1-207ENST00000489692 PRR36Q9H6K5 1346 aa16.79■□□□□ 0.28
GGPS1-207ENST00000489692 UPF1Q92900 1129 aaKnown RBP eCLIP16.79■□□□□ 0.28
GGPS1-207ENST00000489692 L3MBTL2Q969R5 705 aa16.79■□□□□ 0.28
GGPS1-207ENST00000489692 CDK19Q9BWU1 502 aa16.79■□□□□ 0.28
GGPS1-207ENST00000489692 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
GGPS1-207ENST00000489692 SBNO1A3KN83 1393 aa16.78■□□□□ 0.28
GGPS1-207ENST00000489692 NUDT16Q96DE0 195 aaKnown RBP16.78■□□□□ 0.28
GGPS1-207ENST00000489692 CCDC9Q9Y3X0 531 aaKnown RBP16.78■□□□□ 0.28
GGPS1-207ENST00000489692 CDK12Q9NYV4 1490 aaPredicted RBP16.78■□□□□ 0.28
GGPS1-207ENST00000489692 RGS12O14924 1447 aa16.77■□□□□ 0.27
GGPS1-207ENST00000489692 SRPK2P78362 688 aaKnown RBP16.76■□□□□ 0.27
GGPS1-207ENST00000489692 UNC5CLQ8IV45 518 aa16.76■□□□□ 0.27
GGPS1-207ENST00000489692 TULP4Q9NRJ4 1543 aa16.75■□□□□ 0.27
GGPS1-207ENST00000489692 COL22A1Q8NFW1 1626 aaPredicted RBP16.74■□□□□ 0.27
GGPS1-207ENST00000489692 CENPJQ9HC77 1338 aaPredicted RBP16.74■□□□□ 0.27
GGPS1-207ENST00000489692 ATRNO75882 1429 aa16.74■□□□□ 0.27
GGPS1-207ENST00000489692 GJD4Q96KN9 370 aaPredicted RBP16.74■□□□□ 0.27
GGPS1-207ENST00000489692 ADGRB2O60241 1585 aa16.73■□□□□ 0.27
GGPS1-207ENST00000489692 A0A0G2JS52 829 aa16.72■□□□□ 0.27
GGPS1-207ENST00000489692 MYT1Q01538 1121 aa16.72■□□□□ 0.27
GGPS1-207ENST00000489692 CCDC61Q9Y6R9 512 aa16.72■□□□□ 0.27
GGPS1-207ENST00000489692 BCL9LQ86UU0 1499 aa16.72■□□□□ 0.27
GGPS1-207ENST00000489692 NUTM2GQ5VZR2 741 aa16.71■□□□□ 0.27
GGPS1-207ENST00000489692 ATAD2Q6PL18 1390 aa16.71■□□□□ 0.27
GGPS1-207ENST00000489692 ROCK2O75116 1388 aaKnown RBP16.7■□□□□ 0.26
GGPS1-207ENST00000489692 CABP2Q9NPB3 220 aa16.7■□□□□ 0.26
GGPS1-207ENST00000489692 FAM83GA6ND36 823 aa16.69■□□□□ 0.26
GGPS1-207ENST00000489692 ACEP12821 1306 aa16.69■□□□□ 0.26
GGPS1-207ENST00000489692 USP32Q8NFA0 1604 aa16.68■□□□□ 0.26
GGPS1-207ENST00000489692 NBPF8Q3BBV2 869 aa16.68■□□□□ 0.26
GGPS1-207ENST00000489692 PRDM11Q9NQV5 511 aa16.68■□□□□ 0.26
GGPS1-207ENST00000489692 ATP7BP35670 1465 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms