RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 PROM2Q8N271 834 aa8.63□□□□□ -1.03
CNOT9-207ENST00000489687 DDX17Q92841 729 aaKnown RBP8.63□□□□□ -1.03
CNOT9-207ENST00000489687 CCDC144AA2RUR9 1427 aa8.63□□□□□ -1.03
CNOT9-207ENST00000489687 JCADQ9P266 1359 aa8.62□□□□□ -1.03
CNOT9-207ENST00000489687 SPDYE2BA6NHP3 402 aa8.62□□□□□ -1.03
CNOT9-207ENST00000489687 SPDYE6P0CI01 402 aa8.62□□□□□ -1.03
CNOT9-207ENST00000489687 SPDYE2Q495Y8 402 aa8.62□□□□□ -1.03
CNOT9-207ENST00000489687 POTEAQ6S8J7 498 aa8.62□□□□□ -1.03
CNOT9-207ENST00000489687 C19orf44Q9H6X5 657 aa8.62□□□□□ -1.03
CNOT9-207ENST00000489687 DCCP43146 1447 aa8.62□□□□□ -1.03
CNOT9-207ENST00000489687 PTCH1Q13635 1447 aa8.62□□□□□ -1.03
CNOT9-207ENST00000489687 NCOA3Q9Y6Q9 1424 aa8.62□□□□□ -1.03
CNOT9-207ENST00000489687 RGL3Q3MIN7 710 aa8.61□□□□□ -1.03
CNOT9-207ENST00000489687 CADPS2Q86UW7 1296 aa8.61□□□□□ -1.03
CNOT9-207ENST00000489687 SPATA31E1Q6ZUB1 1445 aa8.61□□□□□ -1.03
CNOT9-207ENST00000489687 ADGRF5Q8IZF2 1346 aa8.6□□□□□ -1.03
CNOT9-207ENST00000489687 MKRN4PQ13434 485 aaPredicted RBP8.6□□□□□ -1.03
CNOT9-207ENST00000489687 RAB3GAP2Q9H2M9 1393 aa8.6□□□□□ -1.03
CNOT9-207ENST00000489687 NUTM2BA6NNL0 878 aaPredicted RBP8.59□□□□□ -1.03
CNOT9-207ENST00000489687 NUTM2EB1AL46 878 aaPredicted RBP8.59□□□□□ -1.03
CNOT9-207ENST00000489687 NUTM2AQ8IVF1 878 aaPredicted RBP8.59□□□□□ -1.03
CNOT9-207ENST00000489687 MPHOSPH9Q99550 1183 aa8.59□□□□□ -1.03
CNOT9-207ENST00000489687 C1orf167Q5SNV9 1468 aa8.58□□□□□ -1.04
CNOT9-207ENST00000489687 CDC42BPGQ6DT37 1551 aa8.58□□□□□ -1.04
CNOT9-207ENST00000489687 SETD5Q9C0A6 1442 aa8.58□□□□□ -1.04
CNOT9-207ENST00000489687 MEX3CQ5U5Q3 659 aaKnown RBP8.58□□□□□ -1.04
CNOT9-207ENST00000489687 STK26Q9P289 416 aa8.58□□□□□ -1.04
CNOT9-207ENST00000489687 PLEKHH1Q9ULM0 1364 aa8.58□□□□□ -1.04
CNOT9-207ENST00000489687 SRCAPQ6ZRS2 3230 aa8.58□□□□□ -1.04
CNOT9-207ENST00000489687 KNDC1Q76NI1 1749 aa8.57□□□□□ -1.04
CNOT9-207ENST00000489687 EP400Q96L91 3159 aa8.57□□□□□ -1.04
CNOT9-207ENST00000489687 PIK3C2GO75747 1445 aa8.57□□□□□ -1.04
CNOT9-207ENST00000489687 ZEB1P37275 1124 aaPredicted RBP8.57□□□□□ -1.04
CNOT9-207ENST00000489687 RTN4Q9NQC3 1192 aaKnown RBP8.57□□□□□ -1.04
CNOT9-207ENST00000489687 PRAG1Q86YV5 1406 aa8.56□□□□□ -1.04
CNOT9-207ENST00000489687 NUTM2FA1L443 756 aa8.56□□□□□ -1.04
CNOT9-207ENST00000489687 VGFO15240 615 aaPredicted RBP8.56□□□□□ -1.04
CNOT9-207ENST00000489687 ABCB7O75027 752 aa8.56□□□□□ -1.04
CNOT9-207ENST00000489687 DSG3P32926 999 aa8.56□□□□□ -1.04
CNOT9-207ENST00000489687 TMEM132EQ6IEE7 984 aa8.56□□□□□ -1.04
CNOT9-207ENST00000489687 ORAI2Q96SN7 254 aa8.56□□□□□ -1.04
CNOT9-207ENST00000489687 PNPLA6Q8IY17 1366 aa8.56□□□□□ -1.04
CNOT9-207ENST00000489687 RPGRIP1LQ68CZ1 1315 aa8.55□□□□□ -1.04
CNOT9-207ENST00000489687 LAMC1P11047 1609 aa8.55□□□□□ -1.04
CNOT9-207ENST00000489687 PLEKHG5O94827 1062 aa8.55□□□□□ -1.04
CNOT9-207ENST00000489687 XPCQ01831 940 aaPredicted RBP8.55□□□□□ -1.04
CNOT9-207ENST00000489687 ERICH6Q7L0X2 663 aa8.55□□□□□ -1.04
CNOT9-207ENST00000489687 SPATA31A6Q5VVP1 1343 aa8.54□□□□□ -1.04
CNOT9-207ENST00000489687 FMN2Q9NZ56 1722 aa8.54□□□□□ -1.04
CNOT9-207ENST00000489687 WAPLQ7Z5K2 1190 aa8.54□□□□□ -1.04
CNOT9-207ENST00000489687 ZNF692Q9BU19 519 aaPredicted RBP8.54□□□□□ -1.04
CNOT9-207ENST00000489687 TECPR2O15040 1411 aa8.54□□□□□ -1.04
CNOT9-207ENST00000489687 YTHDC2Q9H6S0 1430 aaKnown RBP8.54□□□□□ -1.04
CNOT9-207ENST00000489687 RGPD8O14715 1765 aaPredicted RBP8.53□□□□□ -1.04
CNOT9-207ENST00000489687 MYOM2P54296 1465 aa8.53□□□□□ -1.04
CNOT9-207ENST00000489687 LRPPRCP42704 1394 aaKnown RBP8.53□□□□□ -1.04
CNOT9-207ENST00000489687 ANKRD30BQ9BXX2 1392 aa8.53□□□□□ -1.04
CNOT9-207ENST00000489687 VASPP50552 380 aaPredicted RBP8.53□□□□□ -1.04
CNOT9-207ENST00000489687 CACNB1Q02641 598 aaPredicted RBP8.53□□□□□ -1.04
CNOT9-207ENST00000489687 AFF2P51816 1311 aa8.53□□□□□ -1.04
CNOT9-207ENST00000489687 PXDNQ92626 1479 aa8.52□□□□□ -1.05
CNOT9-207ENST00000489687 NRXN1Q9ULB1 1477 aa8.52□□□□□ -1.05
CNOT9-207ENST00000489687 ADAMTS2O95450 1211 aa8.52□□□□□ -1.05
CNOT9-207ENST00000489687 SAFB2Q14151 953 aaKnown RBP eCLIP8.52□□□□□ -1.05
CNOT9-207ENST00000489687 C8orf37Q96NL8 207 aa8.52□□□□□ -1.05
CNOT9-207ENST00000489687 RGS12O14924 1447 aa8.51□□□□□ -1.05
CNOT9-207ENST00000489687 COL22A1Q8NFW1 1626 aaPredicted RBP8.51□□□□□ -1.05
CNOT9-207ENST00000489687 ADGRB1O14514 1584 aa8.5□□□□□ -1.05
CNOT9-207ENST00000489687 ESCO1Q5FWF5 840 aa8.5□□□□□ -1.05
CNOT9-207ENST00000489687 CFAP70Q5T0N1 1121 aa8.5□□□□□ -1.05
CNOT9-207ENST00000489687 ZBTB47Q9UFB7 747 aaPredicted RBP8.5□□□□□ -1.05
CNOT9-207ENST00000489687 USP32Q8NFA0 1604 aa8.5□□□□□ -1.05
CNOT9-207ENST00000489687 KIF1AQ12756 1690 aa8.49□□□□□ -1.05
CNOT9-207ENST00000489687 LRRC59Q96AG4 307 aaKnown RBP8.49□□□□□ -1.05
CNOT9-207ENST00000489687 SOS2Q07890 1332 aaPredicted RBP8.49□□□□□ -1.05
CNOT9-207ENST00000489687 ABCA3Q99758 1704 aa8.49□□□□□ -1.05
CNOT9-207ENST00000489687 ABCC11Q96J66 1382 aa8.48□□□□□ -1.05
CNOT9-207ENST00000489687 FOXO3O43524 673 aa8.48□□□□□ -1.05
CNOT9-207ENST00000489687 ZNF772Q68DY9 489 aaPredicted RBP8.48□□□□□ -1.05
CNOT9-207ENST00000489687 PRAM1Q96QH2 718 aa8.48□□□□□ -1.05
CNOT9-207ENST00000489687 MARF1Q9Y4F3 1742 aaKnown RBP8.48□□□□□ -1.05
CNOT9-207ENST00000489687 ARHGEF28Q8N1W1 1705 aaKnown RBP8.47□□□□□ -1.05
CNOT9-207ENST00000489687 HIRIP3Q9BW71 556 aaPredicted RBP8.47□□□□□ -1.05
CNOT9-207ENST00000489687 KDM2AQ9Y2K7 1162 aa8.47□□□□□ -1.05
CNOT9-207ENST00000489687 ADGRB2O60241 1585 aa8.47□□□□□ -1.05
CNOT9-207ENST00000489687 RBM42Q9BTD8 480 aaKnown RBP8.46□□□□□ -1.06
CNOT9-207ENST00000489687 C14orf93Q9H972 538 aaKnown RBP8.46□□□□□ -1.06
CNOT9-207ENST00000489687 NPHP3Q7Z494 1330 aa8.46□□□□□ -1.06
CNOT9-207ENST00000489687 DLC1Q96QB1 1528 aa8.45□□□□□ -1.06
CNOT9-207ENST00000489687 RXRBP28702 533 aa8.45□□□□□ -1.06
CNOT9-207ENST00000489687 DCAF11Q8TEB1 546 aa8.45□□□□□ -1.06
CNOT9-207ENST00000489687 NGLY1Q96IV0 654 aa8.45□□□□□ -1.06
CNOT9-207ENST00000489687 TRAK1Q9UPV9 953 aa8.45□□□□□ -1.06
CNOT9-207ENST00000489687 SSUH2Q9Y2M2 353 aa8.45□□□□□ -1.06
CNOT9-207ENST00000489687 PLCH1Q4KWH8 1693 aa8.45□□□□□ -1.06
CNOT9-207ENST00000489687 MINK1Q8N4C8 1332 aaPredicted RBP8.45□□□□□ -1.06
CNOT9-207ENST00000489687 DHX57Q6P158 1386 aaKnown RBP8.45□□□□□ -1.06
CNOT9-207ENST00000489687 SLC24A1O60721 1099 aa8.44□□□□□ -1.06
CNOT9-207ENST00000489687 TNS3Q68CZ2 1445 aa8.44□□□□□ -1.06
CNOT9-207ENST00000489687 CDK12Q9NYV4 1490 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms