RNA–Protein interactions for RNA: ENST00000489556.5

CNIH3-209, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 5

Gene CNIH3, Length 866 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-209ENST00000489556 KNDC1Q76NI1 1749 aa12.06□□□□□ -0.48
CNIH3-209ENST00000489556 GPRASP1Q5JY77 1395 aa12.05□□□□□ -0.48
CNIH3-209ENST00000489556 NWD1Q149M9 1564 aa12.05□□□□□ -0.48
CNIH3-209ENST00000489556 STRCP1A6NGW2 1772 aa12.05□□□□□ -0.48
CNIH3-209ENST00000489556 HSPA5P11021 654 aaKnown RBP12.05□□□□□ -0.48
CNIH3-209ENST00000489556 ATF3P18847 181 aa12.05□□□□□ -0.48
CNIH3-209ENST00000489556 POLR3GLQ9BT43 218 aa12.05□□□□□ -0.48
CNIH3-209ENST00000489556 XRN1Q8IZH2 1706 aaKnown RBP12.05□□□□□ -0.48
CNIH3-209ENST00000489556 ARHGEF28Q8N1W1 1705 aaKnown RBP12.04□□□□□ -0.48
CNIH3-209ENST00000489556 SLC24A1O60721 1099 aa12.04□□□□□ -0.48
CNIH3-209ENST00000489556 KCNA4P22459 653 aa12.04□□□□□ -0.48
CNIH3-209ENST00000489556 DLC1Q96QB1 1528 aa12.04□□□□□ -0.48
CNIH3-209ENST00000489556 MSH6P52701 1360 aa12.04□□□□□ -0.48
CNIH3-209ENST00000489556 TMEM94Q12767 1356 aa12.04□□□□□ -0.48
CNIH3-209ENST00000489556 PLEKHH1Q9ULM0 1364 aa12.04□□□□□ -0.48
CNIH3-209ENST00000489556 PTCH1Q13635 1447 aa12.03□□□□□ -0.48
CNIH3-209ENST00000489556 FAM135BQ49AJ0 1406 aa12.03□□□□□ -0.48
CNIH3-209ENST00000489556 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
CNIH3-209ENST00000489556 QRICH2Q9H0J4 1663 aa12.03□□□□□ -0.48
CNIH3-209ENST00000489556 TECPR2O15040 1411 aa12.03□□□□□ -0.48
CNIH3-209ENST00000489556 TMF1P82094 1093 aa12.02□□□□□ -0.49
CNIH3-209ENST00000489556 C19orf44Q9H6X5 657 aa12.02□□□□□ -0.49
CNIH3-209ENST00000489556 LRRC7Q96NW7 1537 aa12.01□□□□□ -0.49
CNIH3-209ENST00000489556 NUTM2FA1L443 756 aa12.01□□□□□ -0.49
CNIH3-209ENST00000489556 CERKQ8TCT0 537 aa12.01□□□□□ -0.49
CNIH3-209ENST00000489556 EVC2Q86UK5 1308 aa12.01□□□□□ -0.49
CNIH3-209ENST00000489556 CADPS2Q86UW7 1296 aa12□□□□□ -0.49
CNIH3-209ENST00000489556 CDK19Q9BWU1 502 aa12□□□□□ -0.49
CNIH3-209ENST00000489556 LTBP4Q8N2S1 1624 aa12□□□□□ -0.49
CNIH3-209ENST00000489556 C1QBPQ07021 282 aaKnown RBP11.99□□□□□ -0.49
CNIH3-209ENST00000489556 CDCA8Q53HL2 280 aa11.99□□□□□ -0.49
CNIH3-209ENST00000489556 NCOA3Q9Y6Q9 1424 aa11.99□□□□□ -0.49
CNIH3-209ENST00000489556 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.98□□□□□ -0.49
CNIH3-209ENST00000489556 ADGRL3Q9HAR2 1447 aa11.98□□□□□ -0.49
CNIH3-209ENST00000489556 WASLO00401 505 aaPredicted RBP11.98□□□□□ -0.49
CNIH3-209ENST00000489556 CABP2Q9NPB3 220 aa11.98□□□□□ -0.49
CNIH3-209ENST00000489556 UBAP1LF5GYI3 381 aa11.97□□□□□ -0.49
CNIH3-209ENST00000489556 TOM1O60784 492 aa11.97□□□□□ -0.49
CNIH3-209ENST00000489556 XIRP1Q702N8 1843 aaKnown RBP11.97□□□□□ -0.49
CNIH3-209ENST00000489556 NALCNQ8IZF0 1738 aa11.97□□□□□ -0.49
CNIH3-209ENST00000489556 PIP4K2BP78356 416 aa11.96□□□□□ -0.49
CNIH3-209ENST00000489556 TMC1Q8TDI8 760 aa11.96□□□□□ -0.49
CNIH3-209ENST00000489556 ESCO1Q5FWF5 840 aa11.95□□□□□ -0.5
CNIH3-209ENST00000489556 NUDT16Q96DE0 195 aaKnown RBP11.94□□□□□ -0.5
CNIH3-209ENST00000489556 TESK2Q96S53 571 aa11.94□□□□□ -0.5
CNIH3-209ENST00000489556 SLAIN2Q9P270 581 aa11.94□□□□□ -0.5
CNIH3-209ENST00000489556 SBNO2Q9Y2G9 1366 aa11.92□□□□□ -0.5
CNIH3-209ENST00000489556 NGDNQ8NEJ9 315 aaKnown RBP11.92□□□□□ -0.5
CNIH3-209ENST00000489556 CDC42BPGQ6DT37 1551 aa11.92□□□□□ -0.5
CNIH3-209ENST00000489556 DISP3Q9P2K9 1392 aa11.92□□□□□ -0.5
CNIH3-209ENST00000489556 ZNF316A6NFI3 1004 aaPredicted RBP11.91□□□□□ -0.5
CNIH3-209ENST00000489556 PMFBP1Q8TBY8 1022 aa11.91□□□□□ -0.5
CNIH3-209ENST00000489556 CCDC61Q9Y6R9 512 aa11.91□□□□□ -0.5
CNIH3-209ENST00000489556 DCCP43146 1447 aa11.91□□□□□ -0.5
CNIH3-209ENST00000489556 ADGRB2O60241 1585 aa11.91□□□□□ -0.5
CNIH3-209ENST00000489556 FMN2Q9NZ56 1722 aa11.91□□□□□ -0.5
CNIH3-209ENST00000489556 IQSEC2Q5JU85 1478 aa11.9□□□□□ -0.5
CNIH3-209ENST00000489556 CABP1Q9NZU7 370 aa11.9□□□□□ -0.5
CNIH3-209ENST00000489556 PHF8Q9UPP1 1060 aa11.9□□□□□ -0.5
CNIH3-209ENST00000489556 TULP4Q9NRJ4 1543 aa11.9□□□□□ -0.5
CNIH3-209ENST00000489556 ATAD2Q6PL18 1390 aa11.9□□□□□ -0.5
CNIH3-209ENST00000489556 RGPD8O14715 1765 aaPredicted RBP11.9□□□□□ -0.51
CNIH3-209ENST00000489556 C11orf95C9JLR9 678 aaPredicted RBP11.89□□□□□ -0.51
CNIH3-209ENST00000489556 PSME1Q06323 249 aa11.89□□□□□ -0.51
CNIH3-209ENST00000489556 HDGFL2Q7Z4V5 671 aaPredicted RBP11.89□□□□□ -0.51
CNIH3-209ENST00000489556 PUS7Q96PZ0 661 aaKnown RBP11.89□□□□□ -0.51
CNIH3-209ENST00000489556 ORAI2Q96SN7 254 aa11.89□□□□□ -0.51
CNIH3-209ENST00000489556 C1orf167Q5SNV9 1468 aa11.89□□□□□ -0.51
CNIH3-209ENST00000489556 ITSN1Q15811 1721 aa11.89□□□□□ -0.51
CNIH3-209ENST00000489556 MST1RQ04912 1400 aa11.88□□□□□ -0.51
CNIH3-209ENST00000489556 PPIP5K1Q6PFW1 1433 aa11.88□□□□□ -0.51
CNIH3-209ENST00000489556 SLC12A5Q9H2X9 1139 aa11.88□□□□□ -0.51
CNIH3-209ENST00000489556 TERF2IPQ9NYB0 399 aa11.88□□□□□ -0.51
CNIH3-209ENST00000489556 KIF7Q2M1P5 1343 aa11.87□□□□□ -0.51
CNIH3-209ENST00000489556 PRR36Q9H6K5 1346 aa11.87□□□□□ -0.51
CNIH3-209ENST00000489556 ANKARQ7Z5J8 1434 aa11.87□□□□□ -0.51
CNIH3-209ENST00000489556 FOXO3O43524 673 aa11.87□□□□□ -0.51
CNIH3-209ENST00000489556 PAK3O75914 559 aaPredicted RBP11.86□□□□□ -0.51
CNIH3-209ENST00000489556 LMOD2Q6P5Q4 547 aa11.86□□□□□ -0.51
CNIH3-209ENST00000489556 ACEP12821 1306 aa11.86□□□□□ -0.51
CNIH3-209ENST00000489556 CCDC7Q96M83 1385 aa11.85□□□□□ -0.51
CNIH3-209ENST00000489556 XPCQ01831 940 aaPredicted RBP11.85□□□□□ -0.51
CNIH3-209ENST00000489556 BRINP3Q76B58 766 aa11.85□□□□□ -0.51
CNIH3-209ENST00000489556 USP32Q8NFA0 1604 aa11.85□□□□□ -0.51
CNIH3-209ENST00000489556 WASHC2AQ641Q2 1341 aa11.85□□□□□ -0.51
CNIH3-209ENST00000489556 ATP7BP35670 1465 aa11.84□□□□□ -0.51
CNIH3-209ENST00000489556 PLEKHG3A1L390 1219 aa11.84□□□□□ -0.51
CNIH3-209ENST00000489556 KRT28Q7Z3Y7 464 aa11.84□□□□□ -0.51
CNIH3-209ENST00000489556 ZNF692Q9BU19 519 aaPredicted RBP11.84□□□□□ -0.51
CNIH3-209ENST00000489556 ROBO1Q9Y6N7 1651 aa11.84□□□□□ -0.51
CNIH3-209ENST00000489556 NPHP3Q7Z494 1330 aa11.84□□□□□ -0.51
CNIH3-209ENST00000489556 NINLQ9Y2I6 1382 aa11.83□□□□□ -0.52
CNIH3-209ENST00000489556 PLEKHG5O94827 1062 aa11.83□□□□□ -0.52
CNIH3-209ENST00000489556 DDX10Q13206 875 aaKnown RBP11.83□□□□□ -0.52
CNIH3-209ENST00000489556 DDX17Q92841 729 aaKnown RBP11.83□□□□□ -0.52
CNIH3-209ENST00000489556 KIF1AQ12756 1690 aa11.83□□□□□ -0.52
CNIH3-209ENST00000489556 KTN1Q86UP2 1357 aaKnown RBP11.82□□□□□ -0.52
CNIH3-209ENST00000489556 CNGB1Q14028 1251 aaPredicted RBP11.82□□□□□ -0.52
CNIH3-209ENST00000489556 PANK3Q9H999 370 aa11.82□□□□□ -0.52
CNIH3-209ENST00000489556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms