RNA–Protein interactions for RNA: ENST00000489548.1

PHACTR1-210, Transcript of phosphatase and actin regulator 1, humanhuman

TSL 5

Gene PHACTR1, Length 568 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1-210ENST00000489548 LAMC1P11047 1609 aa13.68□□□□□ -0.22
PHACTR1-210ENST00000489548 PTCH1Q13635 1447 aa13.68□□□□□ -0.22
PHACTR1-210ENST00000489548 CLTCL1P53675 1640 aa13.68□□□□□ -0.22
PHACTR1-210ENST00000489548 ATRNO75882 1429 aa13.66□□□□□ -0.22
PHACTR1-210ENST00000489548 FOXD1Q16676 465 aa13.66□□□□□ -0.22
PHACTR1-210ENST00000489548 ZRANB1Q9UGI0 708 aa13.66□□□□□ -0.22
PHACTR1-210ENST00000489548 TIMELESSQ9UNS1 1208 aa13.65□□□□□ -0.22
PHACTR1-210ENST00000489548 EP400Q96L91 3159 aa13.65□□□□□ -0.22
PHACTR1-210ENST00000489548 RAB3GAP2Q9H2M9 1393 aa13.64□□□□□ -0.23
PHACTR1-210ENST00000489548 ZNF316A6NFI3 1004 aaPredicted RBP13.64□□□□□ -0.23
PHACTR1-210ENST00000489548 ESCO1Q5FWF5 840 aa13.64□□□□□ -0.23
PHACTR1-210ENST00000489548 CCDC125Q86Z20 511 aa13.64□□□□□ -0.23
PHACTR1-210ENST00000489548 PRAG1Q86YV5 1406 aa13.64□□□□□ -0.23
PHACTR1-210ENST00000489548 RPGRIP1LQ68CZ1 1315 aa13.64□□□□□ -0.23
PHACTR1-210ENST00000489548 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
PHACTR1-210ENST00000489548 HFM1A2PYH4 1435 aa13.63□□□□□ -0.23
PHACTR1-210ENST00000489548 KIF1BO60333 1816 aa13.62□□□□□ -0.23
PHACTR1-210ENST00000489548 MYOM2P54296 1465 aa13.62□□□□□ -0.23
PHACTR1-210ENST00000489548 BCL9LQ86UU0 1499 aa13.62□□□□□ -0.23
PHACTR1-210ENST00000489548 FOXO3O43524 673 aa13.62□□□□□ -0.23
PHACTR1-210ENST00000489548 GJD4Q96KN9 370 aaPredicted RBP13.62□□□□□ -0.23
PHACTR1-210ENST00000489548 COL22A1Q8NFW1 1626 aaPredicted RBP13.61□□□□□ -0.23
PHACTR1-210ENST00000489548 XPCQ01831 940 aaPredicted RBP13.61□□□□□ -0.23
PHACTR1-210ENST00000489548 NAIPQ13075 1403 aa13.59□□□□□ -0.23
PHACTR1-210ENST00000489548 PXDNQ92626 1479 aa13.59□□□□□ -0.23
PHACTR1-210ENST00000489548 NUTM2FA1L443 756 aa13.58□□□□□ -0.24
PHACTR1-210ENST00000489548 LRPPRCP42704 1394 aaKnown RBP13.58□□□□□ -0.24
PHACTR1-210ENST00000489548 WAPLQ7Z5K2 1190 aa13.57□□□□□ -0.24
PHACTR1-210ENST00000489548 UNC5CLQ8IV45 518 aa13.57□□□□□ -0.24
PHACTR1-210ENST00000489548 SLC4A1APQ9BWU0 796 aaKnown RBP13.57□□□□□ -0.24
PHACTR1-210ENST00000489548 DIEXFQ68CQ4 756 aaKnown RBP13.56□□□□□ -0.24
PHACTR1-210ENST00000489548 STK26Q9P289 416 aa13.56□□□□□ -0.24
PHACTR1-210ENST00000489548 CDC42BPGQ6DT37 1551 aa13.56□□□□□ -0.24
PHACTR1-210ENST00000489548 ADGRF5Q8IZF2 1346 aa13.55□□□□□ -0.24
PHACTR1-210ENST00000489548 SPATA31A3Q5VYP0 1347 aa13.54□□□□□ -0.24
PHACTR1-210ENST00000489548 MARF1Q9Y4F3 1742 aaKnown RBP13.53□□□□□ -0.24
PHACTR1-210ENST00000489548 PPLO60437 1756 aa13.53□□□□□ -0.24
PHACTR1-210ENST00000489548 BLMP54132 1417 aaPredicted RBP13.53□□□□□ -0.24
PHACTR1-210ENST00000489548 RALGAPBQ86X10 1494 aa13.53□□□□□ -0.24
PHACTR1-210ENST00000489548 SLIT2O94813 1529 aa13.53□□□□□ -0.24
PHACTR1-210ENST00000489548 RGL3Q3MIN7 710 aa13.52□□□□□ -0.25
PHACTR1-210ENST00000489548 TMEM132EQ6IEE7 984 aa13.52□□□□□ -0.25
PHACTR1-210ENST00000489548 KRT28Q7Z3Y7 464 aa13.52□□□□□ -0.25
PHACTR1-210ENST00000489548 DEFB132Q7Z7B7 95 aa13.52□□□□□ -0.25
PHACTR1-210ENST00000489548 ABCC11Q96J66 1382 aa13.52□□□□□ -0.25
PHACTR1-210ENST00000489548 TECPR2O15040 1411 aa13.52□□□□□ -0.25
PHACTR1-210ENST00000489548 GLI3P10071 1580 aa13.51□□□□□ -0.25
PHACTR1-210ENST00000489548 PLEKHH1Q9ULM0 1364 aa13.51□□□□□ -0.25
PHACTR1-210ENST00000489548 SEPT12Q8IYM1 358 aa13.51□□□□□ -0.25
PHACTR1-210ENST00000489548 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.5□□□□□ -0.25
PHACTR1-210ENST00000489548 ONECUT3O60422 494 aaPredicted RBP13.49□□□□□ -0.25
PHACTR1-210ENST00000489548 SF3B2Q13435 895 aaKnown RBP13.49□□□□□ -0.25
PHACTR1-210ENST00000489548 VPS72Q15906 364 aa13.49□□□□□ -0.25
PHACTR1-210ENST00000489548 CCDC144AA2RUR9 1427 aa13.48□□□□□ -0.25
PHACTR1-210ENST00000489548 ANKRD30BQ9BXX2 1392 aa13.48□□□□□ -0.25
PHACTR1-210ENST00000489548 HAP1P54257 671 aaPredicted RBP13.48□□□□□ -0.25
PHACTR1-210ENST00000489548 PSME1Q06323 249 aa13.48□□□□□ -0.25
PHACTR1-210ENST00000489548 CABLES1Q8TDN4 633 aa13.48□□□□□ -0.25
PHACTR1-210ENST00000489548 SIRT1Q96EB6 747 aa13.47□□□□□ -0.25
PHACTR1-210ENST00000489548 PHF8Q9UPP1 1060 aa13.47□□□□□ -0.25
PHACTR1-210ENST00000489548 SPATA31E1Q6ZUB1 1445 aa13.47□□□□□ -0.25
PHACTR1-210ENST00000489548 PLEKHG5O94827 1062 aa13.46□□□□□ -0.25
PHACTR1-210ENST00000489548 KRT27Q7Z3Y8 459 aa13.46□□□□□ -0.25
PHACTR1-210ENST00000489548 CCDC9Q9Y3X0 531 aaKnown RBP13.46□□□□□ -0.25
PHACTR1-210ENST00000489548 YTHDC2Q9H6S0 1430 aaKnown RBP13.46□□□□□ -0.26
PHACTR1-210ENST00000489548 USP32Q8NFA0 1604 aa13.46□□□□□ -0.26
PHACTR1-210ENST00000489548 BRWD3Q6RI45 1802 aa13.46□□□□□ -0.26
PHACTR1-210ENST00000489548 FMN2Q9NZ56 1722 aa13.45□□□□□ -0.26
PHACTR1-210ENST00000489548 LMOD2Q6P5Q4 547 aa13.45□□□□□ -0.26
PHACTR1-210ENST00000489548 KIF1AQ12756 1690 aa13.44□□□□□ -0.26
PHACTR1-210ENST00000489548 FAM83GA6ND36 823 aa13.44□□□□□ -0.26
PHACTR1-210ENST00000489548 PIK3C2GO75747 1445 aa13.44□□□□□ -0.26
PHACTR1-210ENST00000489548 TNS3Q68CZ2 1445 aa13.44□□□□□ -0.26
PHACTR1-210ENST00000489548 KNDC1Q76NI1 1749 aa13.43□□□□□ -0.26
PHACTR1-210ENST00000489548 MPHOSPH9Q99550 1183 aa13.43□□□□□ -0.26
PHACTR1-210ENST00000489548 C14orf93Q9H972 538 aaKnown RBP13.43□□□□□ -0.26
PHACTR1-210ENST00000489548 SBNO1A3KN83 1393 aa13.43□□□□□ -0.26
PHACTR1-210ENST00000489548 ARHGEF10O15013 1369 aa13.42□□□□□ -0.26
PHACTR1-210ENST00000489548 A0A0G2JS52 829 aa13.41□□□□□ -0.26
PHACTR1-210ENST00000489548 BAG6P46379 1132 aa13.41□□□□□ -0.26
PHACTR1-210ENST00000489548 MYT1Q01538 1121 aa13.41□□□□□ -0.26
PHACTR1-210ENST00000489548 CFAP70Q5T0N1 1121 aa13.41□□□□□ -0.26
PHACTR1-210ENST00000489548 RGPD8O14715 1765 aaPredicted RBP13.4□□□□□ -0.26
PHACTR1-210ENST00000489548 IFT172Q9UG01 1749 aa13.4□□□□□ -0.26
PHACTR1-210ENST00000489548 NWD2Q9ULI1 1742 aa13.4□□□□□ -0.26
PHACTR1-210ENST00000489548 PSDA5PKW4 1024 aaPredicted RBP13.4□□□□□ -0.26
PHACTR1-210ENST00000489548 SAFB2Q14151 953 aaKnown RBP eCLIP13.4□□□□□ -0.26
PHACTR1-210ENST00000489548 FAM98CQ17RN3 349 aaKnown RBP13.4□□□□□ -0.26
PHACTR1-210ENST00000489548 PMFBP1Q8TBY8 1022 aa13.4□□□□□ -0.26
PHACTR1-210ENST00000489548 PRAM1Q96QH2 718 aa13.4□□□□□ -0.26
PHACTR1-210ENST00000489548 NRXN1Q9ULB1 1477 aa13.4□□□□□ -0.26
PHACTR1-210ENST00000489548 BTG4Q9NY30 223 aa13.39□□□□□ -0.27
PHACTR1-210ENST00000489548 PLCH1Q4KWH8 1693 aa13.39□□□□□ -0.27
PHACTR1-210ENST00000489548 LRP5O75197 1615 aa13.39□□□□□ -0.27
PHACTR1-210ENST00000489548 EN1Q05925 392 aaPredicted RBP13.37□□□□□ -0.27
PHACTR1-210ENST00000489548 POGKQ9P215 609 aa13.37□□□□□ -0.27
PHACTR1-210ENST00000489548 FAM182BQ5T319 152 aa13.36□□□□□ -0.27
PHACTR1-210ENST00000489548 ANKARQ7Z5J8 1434 aa13.36□□□□□ -0.27
PHACTR1-210ENST00000489548 ABCA3Q99758 1704 aa13.35□□□□□ -0.27
PHACTR1-210ENST00000489548 TONSLQ96HA7 1378 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms