RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 NAIPQ13075 1403 aa16.4■□□□□ 0.22
PTP4A2-206ENST00000489313 PTCH1Q13635 1447 aa16.4■□□□□ 0.22
PTP4A2-206ENST00000489313 VGFO15240 615 aaPredicted RBP16.37■□□□□ 0.21
PTP4A2-206ENST00000489313 SOS2Q07890 1332 aaPredicted RBP16.37■□□□□ 0.21
PTP4A2-206ENST00000489313 PPLO60437 1756 aa16.36■□□□□ 0.21
PTP4A2-206ENST00000489313 RRBP1Q9P2E9 1410 aaKnown RBP16.35■□□□□ 0.21
PTP4A2-206ENST00000489313 USP21Q9UK80 565 aa16.34■□□□□ 0.21
PTP4A2-206ENST00000489313 PRAG1Q86YV5 1406 aa16.33■□□□□ 0.21
PTP4A2-206ENST00000489313 HFM1A2PYH4 1435 aa16.33■□□□□ 0.2
PTP4A2-206ENST00000489313 COL22A1Q8NFW1 1626 aaPredicted RBP16.32■□□□□ 0.2
PTP4A2-206ENST00000489313 RPGRIP1LQ68CZ1 1315 aa16.32■□□□□ 0.2
PTP4A2-206ENST00000489313 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
PTP4A2-206ENST00000489313 ATAD2Q6PL18 1390 aa16.31■□□□□ 0.2
PTP4A2-206ENST00000489313 ESCO1Q5FWF5 840 aa16.3■□□□□ 0.2
PTP4A2-206ENST00000489313 FNBP4Q8N3X1 1017 aaPredicted RBP16.3■□□□□ 0.2
PTP4A2-206ENST00000489313 TRPC5Q9UL62 973 aaPredicted RBP16.3■□□□□ 0.2
PTP4A2-206ENST00000489313 CDC42BPGQ6DT37 1551 aa16.29■□□□□ 0.2
PTP4A2-206ENST00000489313 ATRNO75882 1429 aa16.29■□□□□ 0.2
PTP4A2-206ENST00000489313 XPCQ01831 940 aaPredicted RBP16.29■□□□□ 0.2
PTP4A2-206ENST00000489313 MYOM2P54296 1465 aa16.28■□□□□ 0.2
PTP4A2-206ENST00000489313 MARF1Q9Y4F3 1742 aaKnown RBP16.28■□□□□ 0.2
PTP4A2-206ENST00000489313 NPHP3Q7Z494 1330 aa16.28■□□□□ 0.2
PTP4A2-206ENST00000489313 PXDNQ92626 1479 aa16.28■□□□□ 0.2
PTP4A2-206ENST00000489313 FOXO3O43524 673 aa16.27■□□□□ 0.2
PTP4A2-206ENST00000489313 ADGRF5Q8IZF2 1346 aa16.27■□□□□ 0.19
PTP4A2-206ENST00000489313 NUTM2FA1L443 756 aa16.26■□□□□ 0.19
PTP4A2-206ENST00000489313 STK26Q9P289 416 aa16.26■□□□□ 0.19
PTP4A2-206ENST00000489313 WAPLQ7Z5K2 1190 aa16.26■□□□□ 0.19
PTP4A2-206ENST00000489313 BCL9LQ86UU0 1499 aa16.25■□□□□ 0.19
PTP4A2-206ENST00000489313 RGL3Q3MIN7 710 aa16.25■□□□□ 0.19
PTP4A2-206ENST00000489313 IFT172Q9UG01 1749 aa16.23■□□□□ 0.19
PTP4A2-206ENST00000489313 PLEKHH1Q9ULM0 1364 aa16.22■□□□□ 0.19
PTP4A2-206ENST00000489313 TMEM132EQ6IEE7 984 aa16.21■□□□□ 0.19
PTP4A2-206ENST00000489313 CCDC144AA2RUR9 1427 aa16.21■□□□□ 0.19
PTP4A2-206ENST00000489313 TECPR2O15040 1411 aa16.21■□□□□ 0.19
PTP4A2-206ENST00000489313 LRPPRCP42704 1394 aaKnown RBP16.21■□□□□ 0.18
PTP4A2-206ENST00000489313 KNDC1Q76NI1 1749 aa16.2■□□□□ 0.18
PTP4A2-206ENST00000489313 FMN2Q9NZ56 1722 aa16.2■□□□□ 0.18
PTP4A2-206ENST00000489313 SPATA31E1Q6ZUB1 1445 aa16.2■□□□□ 0.18
PTP4A2-206ENST00000489313 GJD4Q96KN9 370 aaPredicted RBP16.2■□□□□ 0.18
PTP4A2-206ENST00000489313 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.19■□□□□ 0.18
PTP4A2-206ENST00000489313 ZRANB1Q9UGI0 708 aa16.19■□□□□ 0.18
PTP4A2-206ENST00000489313 ABCC11Q96J66 1382 aa16.18■□□□□ 0.18
PTP4A2-206ENST00000489313 RGPD8O14715 1765 aaPredicted RBP16.18■□□□□ 0.18
PTP4A2-206ENST00000489313 ANKRD30BQ9BXX2 1392 aa16.18■□□□□ 0.18
PTP4A2-206ENST00000489313 KIF1AQ12756 1690 aa16.18■□□□□ 0.18
PTP4A2-206ENST00000489313 GLI3P10071 1580 aa16.17■□□□□ 0.18
PTP4A2-206ENST00000489313 SPATA31A3Q5VYP0 1347 aa16.17■□□□□ 0.18
PTP4A2-206ENST00000489313 PIK3C2GO75747 1445 aa16.17■□□□□ 0.18
PTP4A2-206ENST00000489313 YTHDC2Q9H6S0 1430 aaKnown RBP16.16■□□□□ 0.18
PTP4A2-206ENST00000489313 UNC5CLQ8IV45 518 aa16.16■□□□□ 0.18
PTP4A2-206ENST00000489313 BRWD3Q6RI45 1802 aa16.16■□□□□ 0.18
PTP4A2-206ENST00000489313 RALGAPBQ86X10 1494 aa16.16■□□□□ 0.18
PTP4A2-206ENST00000489313 SLIT2O94813 1529 aa16.16■□□□□ 0.18
PTP4A2-206ENST00000489313 USP32Q8NFA0 1604 aa16.15■□□□□ 0.18
PTP4A2-206ENST00000489313 KRT28Q7Z3Y7 464 aa16.15■□□□□ 0.18
PTP4A2-206ENST00000489313 CCDC125Q86Z20 511 aa16.15■□□□□ 0.18
PTP4A2-206ENST00000489313 PLEKHG5O94827 1062 aa16.14■□□□□ 0.17
PTP4A2-206ENST00000489313 MPHOSPH9Q99550 1183 aa16.14■□□□□ 0.17
PTP4A2-206ENST00000489313 CABLES1Q8TDN4 633 aa16.13■□□□□ 0.17
PTP4A2-206ENST00000489313 HAP1P54257 671 aaPredicted RBP16.12■□□□□ 0.17
PTP4A2-206ENST00000489313 PHF8Q9UPP1 1060 aa16.12■□□□□ 0.17
PTP4A2-206ENST00000489313 TNS3Q68CZ2 1445 aa16.12■□□□□ 0.17
PTP4A2-206ENST00000489313 PLCH1Q4KWH8 1693 aa16.11■□□□□ 0.17
PTP4A2-206ENST00000489313 BLMP54132 1417 aaPredicted RBP16.1■□□□□ 0.17
PTP4A2-206ENST00000489313 ABCA3Q99758 1704 aa16.1■□□□□ 0.17
PTP4A2-206ENST00000489313 SAFB2Q14151 953 aaKnown RBP eCLIP16.09■□□□□ 0.17
PTP4A2-206ENST00000489313 CFAP70Q5T0N1 1121 aa16.09■□□□□ 0.17
PTP4A2-206ENST00000489313 LMOD2Q6P5Q4 547 aa16.09■□□□□ 0.17
PTP4A2-206ENST00000489313 DEFB132Q7Z7B7 95 aa16.09■□□□□ 0.17
PTP4A2-206ENST00000489313 SEPT12Q8IYM1 358 aa16.09■□□□□ 0.17
PTP4A2-206ENST00000489313 SIRT1Q96EB6 747 aa16.09■□□□□ 0.17
PTP4A2-206ENST00000489313 C14orf93Q9H972 538 aaKnown RBP16.09■□□□□ 0.17
PTP4A2-206ENST00000489313 NWD2Q9ULI1 1742 aa16.08■□□□□ 0.16
PTP4A2-206ENST00000489313 PSME1Q06323 249 aa16.08■□□□□ 0.16
PTP4A2-206ENST00000489313 CCDC9Q9Y3X0 531 aaKnown RBP16.08■□□□□ 0.16
PTP4A2-206ENST00000489313 NRXN1Q9ULB1 1477 aa16.07■□□□□ 0.16
PTP4A2-206ENST00000489313 VPS72Q15906 364 aa16.07■□□□□ 0.16
PTP4A2-206ENST00000489313 PRAM1Q96QH2 718 aa16.07■□□□□ 0.16
PTP4A2-206ENST00000489313 DHX57Q6P158 1386 aaKnown RBP16.06■□□□□ 0.16
PTP4A2-206ENST00000489313 SBNO1A3KN83 1393 aa16.06■□□□□ 0.16
PTP4A2-206ENST00000489313 PMFBP1Q8TBY8 1022 aa16.04■□□□□ 0.16
PTP4A2-206ENST00000489313 SF3B2Q13435 895 aaKnown RBP16.04■□□□□ 0.16
PTP4A2-206ENST00000489313 ARHGEF10O15013 1369 aa16.03■□□□□ 0.16
PTP4A2-206ENST00000489313 FAM83GA6ND36 823 aa16.03■□□□□ 0.16
PTP4A2-206ENST00000489313 ONECUT3O60422 494 aaPredicted RBP16.03■□□□□ 0.16
PTP4A2-206ENST00000489313 POGKQ9P215 609 aa16.03■□□□□ 0.16
PTP4A2-206ENST00000489313 KRT27Q7Z3Y8 459 aa16.02■□□□□ 0.16
PTP4A2-206ENST00000489313 NRAPQ86VF7 1730 aa16.02■□□□□ 0.15
PTP4A2-206ENST00000489313 A0A0G2JS52 829 aa16.01■□□□□ 0.15
PTP4A2-206ENST00000489313 MYT1Q01538 1121 aa16.01■□□□□ 0.15
PTP4A2-206ENST00000489313 TRPM3Q9HCF6 1732 aaPredicted RBP16.01■□□□□ 0.15
PTP4A2-206ENST00000489313 ANKARQ7Z5J8 1434 aa16.01■□□□□ 0.15
PTP4A2-206ENST00000489313 DLC1Q96QB1 1528 aa16.01■□□□□ 0.15
PTP4A2-206ENST00000489313 HIRIP3Q9BW71 556 aaPredicted RBP16■□□□□ 0.15
PTP4A2-206ENST00000489313 ADGRB2O60241 1585 aa16■□□□□ 0.15
PTP4A2-206ENST00000489313 FAM98CQ17RN3 349 aaKnown RBP15.99■□□□□ 0.15
PTP4A2-206ENST00000489313 BTG4Q9NY30 223 aa15.99■□□□□ 0.15
PTP4A2-206ENST00000489313 TRAK1Q9UPV9 953 aa15.99■□□□□ 0.15
PTP4A2-206ENST00000489313 ALS2Q96Q42 1657 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms