RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 KNDC1Q76NI1 1749 aa24.69■■□□□ 1.54
CD40-206ENST00000489304 ROBO2Q9HCK4 1378 aa24.69■■□□□ 1.54
CD40-206ENST00000489304 CNGB1Q14028 1251 aaPredicted RBP24.69■■□□□ 1.54
CD40-206ENST00000489304 EVC2Q86UK5 1308 aa24.68■■□□□ 1.54
CD40-206ENST00000489304 CABP2Q9NPB3 220 aa24.67■■□□□ 1.54
CD40-206ENST00000489304 DIP2AQ14689 1571 aa24.67■■□□□ 1.54
CD40-206ENST00000489304 CPS1P31327 1500 aa24.67■■□□□ 1.54
CD40-206ENST00000489304 AMOTL2Q9Y2J4 779 aa24.66■■□□□ 1.54
CD40-206ENST00000489304 RALBP1Q15311 655 aa24.66■■□□□ 1.54
CD40-206ENST00000489304 SIRT1Q96EB6 747 aa24.66■■□□□ 1.54
CD40-206ENST00000489304 NPHP4O75161 1426 aaPredicted RBP24.65■■□□□ 1.54
CD40-206ENST00000489304 FAM135BQ49AJ0 1406 aa24.65■■□□□ 1.54
CD40-206ENST00000489304 HSPA2P54652 639 aa24.64■■□□□ 1.53
CD40-206ENST00000489304 PARD3Q8TEW0 1356 aa24.63■■□□□ 1.53
CD40-206ENST00000489304 CCDC184Q52MB2 194 aa24.63■■□□□ 1.53
CD40-206ENST00000489304 CDK19Q9BWU1 502 aa24.61■■□□□ 1.53
CD40-206ENST00000489304 SRPK2P78362 688 aaKnown RBP24.61■■□□□ 1.53
CD40-206ENST00000489304 SLC12A5Q9H2X9 1139 aa24.61■■□□□ 1.53
CD40-206ENST00000489304 TMC1Q8TDI8 760 aa24.6■■□□□ 1.53
CD40-206ENST00000489304 MRS2Q9HD23 443 aa24.59■■□□□ 1.53
CD40-206ENST00000489304 MYBBP1AQ9BQG0 1328 aaKnown RBP24.59■■□□□ 1.53
CD40-206ENST00000489304 KNSTRNQ9Y448 316 aa24.58■■□□□ 1.53
CD40-206ENST00000489304 NPC1L1Q9UHC9 1359 aa24.58■■□□□ 1.53
CD40-206ENST00000489304 KCNA6P17658 529 aa24.58■■□□□ 1.52
CD40-206ENST00000489304 PIK3R4Q99570 1358 aa24.57■■□□□ 1.52
CD40-206ENST00000489304 XRN1Q8IZH2 1706 aaKnown RBP24.57■■□□□ 1.52
CD40-206ENST00000489304 LMTK3Q96Q04 1460 aa24.56■■□□□ 1.52
CD40-206ENST00000489304 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.56■■□□□ 1.52
CD40-206ENST00000489304 WASLO00401 505 aaPredicted RBP24.55■■□□□ 1.52
CD40-206ENST00000489304 AMER1Q5JTC6 1135 aaPredicted RBP24.55■■□□□ 1.52
CD40-206ENST00000489304 CARD14Q9BXL6 1004 aa24.55■■□□□ 1.52
CD40-206ENST00000489304 PTCH1Q13635 1447 aa24.54■■□□□ 1.52
CD40-206ENST00000489304 BRD4O60885 1362 aaPredicted RBP24.54■■□□□ 1.52
CD40-206ENST00000489304 CC2D1BQ5T0F9 858 aaKnown RBP24.52■■□□□ 1.52
CD40-206ENST00000489304 NINLQ9Y2I6 1382 aa24.52■■□□□ 1.52
CD40-206ENST00000489304 ATAD2Q6PL18 1390 aa24.51■■□□□ 1.51
CD40-206ENST00000489304 CHD2O14647 1828 aaKnown RBP24.5■■□□□ 1.51
CD40-206ENST00000489304 USP32Q8NFA0 1604 aa24.5■■□□□ 1.51
CD40-206ENST00000489304 NLRP13Q86W25 1043 aa24.49■■□□□ 1.51
CD40-206ENST00000489304 RBM33Q96EV2 1170 aaKnown RBP24.47■■□□□ 1.51
CD40-206ENST00000489304 ANKRD36BQ8N2N9 1353 aa24.47■■□□□ 1.51
CD40-206ENST00000489304 CABP1Q9NZU7 370 aa24.47■■□□□ 1.51
CD40-206ENST00000489304 ADGRB2O60241 1585 aa24.46■■□□□ 1.51
CD40-206ENST00000489304 PRR36Q9H6K5 1346 aa24.45■■□□□ 1.5
CD40-206ENST00000489304 NUDT16Q96DE0 195 aaKnown RBP24.45■■□□□ 1.5
CD40-206ENST00000489304 NSD3Q9BZ95 1437 aa24.45■■□□□ 1.5
CD40-206ENST00000489304 CD163L1Q9NR16 1453 aa24.44■■□□□ 1.5
CD40-206ENST00000489304 NUTM2FA1L443 756 aa24.44■■□□□ 1.5
CD40-206ENST00000489304 FAM9BQ8IZU0 186 aa24.44■■□□□ 1.5
CD40-206ENST00000489304 PNISRQ8TF01 805 aaKnown RBP24.43■■□□□ 1.5
CD40-206ENST00000489304 A0A1W2PP64 1363 aa24.43■■□□□ 1.5
CD40-206ENST00000489304 ATP7BP35670 1465 aa24.4■■□□□ 1.5
CD40-206ENST00000489304 STRCQ7RTU9 1775 aa24.4■■□□□ 1.5
CD40-206ENST00000489304 NWD1Q149M9 1564 aa24.39■■□□□ 1.5
CD40-206ENST00000489304 PPIP5K1Q6PFW1 1433 aa24.39■■□□□ 1.49
CD40-206ENST00000489304 PPP2R1AP30153 589 aa24.38■■□□□ 1.49
CD40-206ENST00000489304 HNRNPUQ00839 825 aaKnown RBP eCLIP24.38■■□□□ 1.49
CD40-206ENST00000489304 TERF2IPQ9NYB0 399 aa24.37■■□□□ 1.49
CD40-206ENST00000489304 CCDC61Q9Y6R9 512 aa24.37■■□□□ 1.49
CD40-206ENST00000489304 HDGFL2Q7Z4V5 671 aaPredicted RBP24.35■■□□□ 1.49
CD40-206ENST00000489304 CGNL1Q0VF96 1302 aa24.35■■□□□ 1.49
CD40-206ENST00000489304 NSD2O96028 1365 aa24.34■■□□□ 1.49
CD40-206ENST00000489304 NALCNQ8IZF0 1738 aa24.34■■□□□ 1.49
CD40-206ENST00000489304 PROSER2Q86WR7 435 aaPredicted RBP24.33■■□□□ 1.49
CD40-206ENST00000489304 ANKRD26Q9UPS8 1709 aa24.32■■□□□ 1.48
CD40-206ENST00000489304 STRCP1A6NGW2 1772 aa24.32■■□□□ 1.48
CD40-206ENST00000489304 CPSF1Q10570 1443 aaKnown RBP24.31■■□□□ 1.48
CD40-206ENST00000489304 TOPAZ1Q8N9V7 1692 aa24.3■■□□□ 1.48
CD40-206ENST00000489304 CDC42BPGQ6DT37 1551 aa24.3■■□□□ 1.48
CD40-206ENST00000489304 ADGRL3Q9HAR2 1447 aa24.3■■□□□ 1.48
CD40-206ENST00000489304 NKTRP30414 1462 aaKnown RBP24.29■■□□□ 1.48
CD40-206ENST00000489304 INSRP06213 1382 aa24.28■■□□□ 1.48
CD40-206ENST00000489304 PLEKHG3A1L390 1219 aa24.28■■□□□ 1.48
CD40-206ENST00000489304 C14orf37Q86TY3 774 aa24.28■■□□□ 1.48
CD40-206ENST00000489304 KIF20BQ96Q89 1820 aa24.28■■□□□ 1.48
CD40-206ENST00000489304 AKAP12Q02952 1782 aa24.28■■□□□ 1.48
CD40-206ENST00000489304 MORC1Q86VD1 984 aa24.27■■□□□ 1.48
CD40-206ENST00000489304 PMFBP1Q8TBY8 1022 aa24.27■■□□□ 1.48
CD40-206ENST00000489304 FMN2Q9NZ56 1722 aa24.27■■□□□ 1.48
CD40-206ENST00000489304 ITSN1Q15811 1721 aa24.27■■□□□ 1.48
CD40-206ENST00000489304 GGNBP2Q9H3C7 697 aa24.27■■□□□ 1.48
CD40-206ENST00000489304 ACEP12821 1306 aa24.26■■□□□ 1.47
CD40-206ENST00000489304 ZBED9Q6R2W3 1325 aa24.26■■□□□ 1.47
CD40-206ENST00000489304 FYB1O15117 783 aa24.26■■□□□ 1.47
CD40-206ENST00000489304 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.26■■□□□ 1.47
CD40-206ENST00000489304 MON2Q7Z3U7 1717 aa24.26■■□□□ 1.47
CD40-206ENST00000489304 RGPD8O14715 1765 aaPredicted RBP24.24■■□□□ 1.47
CD40-206ENST00000489304 ANKARQ7Z5J8 1434 aa24.24■■□□□ 1.47
CD40-206ENST00000489304 TNNT2P45379 298 aaPredicted RBP24.24■■□□□ 1.47
CD40-206ENST00000489304 TMEM94Q12767 1356 aa24.23■■□□□ 1.47
CD40-206ENST00000489304 ZNF335Q9H4Z2 1342 aaPredicted RBP24.22■■□□□ 1.47
CD40-206ENST00000489304 EDC4Q6P2E9 1401 aaKnown RBP24.21■■□□□ 1.47
CD40-206ENST00000489304 ZNF692Q9BU19 519 aaPredicted RBP24.21■■□□□ 1.47
CD40-206ENST00000489304 ZRANB1Q9UGI0 708 aa24.2■■□□□ 1.46
CD40-206ENST00000489304 POLR3AO14802 1390 aaPredicted RBP24.19■■□□□ 1.46
CD40-206ENST00000489304 NME9Q86XW9 330 aa24.19■■□□□ 1.46
CD40-206ENST00000489304 SCAF1Q9H7N4 1312 aaKnown RBP24.19■■□□□ 1.46
CD40-206ENST00000489304 BLMP54132 1417 aaPredicted RBP24.18■■□□□ 1.46
CD40-206ENST00000489304 NGDNQ8NEJ9 315 aaKnown RBP24.17■■□□□ 1.46
CD40-206ENST00000489304 C19orf44Q9H6X5 657 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms