RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 RCCD1A6NED2 376 aa10.35□□□□□ -0.75
CBWD1-216ENST00000489272 BMP1P13497 986 aa10.35□□□□□ -0.75
CBWD1-216ENST00000489272 GPAT2Q6NUI2 795 aa10.34□□□□□ -0.75
CBWD1-216ENST00000489272 RTN4Q9NQC3 1192 aaKnown RBP10.34□□□□□ -0.75
CBWD1-216ENST00000489272 ARIH1Q9Y4X5 557 aaPredicted RBP10.34□□□□□ -0.75
CBWD1-216ENST00000489272 KRTAP1-3Q8IUG1 177 aa10.32□□□□□ -0.76
CBWD1-216ENST00000489272 PRDM9Q9NQV7 894 aa10.32□□□□□ -0.76
CBWD1-216ENST00000489272 ADGRG1Q9Y653 693 aa10.31□□□□□ -0.76
CBWD1-216ENST00000489272 PSMG3-AS1Q96PY0 264 aa10.3□□□□□ -0.76
CBWD1-216ENST00000489272 DNMT3AQ9Y6K1 912 aaPredicted RBP10.3□□□□□ -0.76
CBWD1-216ENST00000489272 FMNL1O95466 1100 aaPredicted RBP10.29□□□□□ -0.76
CBWD1-216ENST00000489272 MORN1Q5T089 497 aa10.28□□□□□ -0.76
CBWD1-216ENST00000489272 BBXQ8WY36 941 aaPredicted RBP10.27□□□□□ -0.77
CBWD1-216ENST00000489272 ADAMTS8Q9UP79 889 aa10.27□□□□□ -0.77
CBWD1-216ENST00000489272 CAPN5O15484 640 aaPredicted RBP10.26□□□□□ -0.77
CBWD1-216ENST00000489272 SALL2Q9Y467 1007 aaPredicted RBP10.25□□□□□ -0.77
CBWD1-216ENST00000489272 FOXK2Q01167 660 aa10.24□□□□□ -0.77
CBWD1-216ENST00000489272 MSS51Q4VC12 460 aa10.24□□□□□ -0.77
CBWD1-216ENST00000489272 RC3H1Q5TC82 1133 aaKnown RBP10.24□□□□□ -0.77
CBWD1-216ENST00000489272 RSPH4AQ5TD94 716 aa10.24□□□□□ -0.77
CBWD1-216ENST00000489272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.23□□□□□ -0.77
CBWD1-216ENST00000489272 ALDH1A1P00352 501 aa10.23□□□□□ -0.77
CBWD1-216ENST00000489272 ZFP42Q96MM3 310 aa10.23□□□□□ -0.77
CBWD1-216ENST00000489272 E2F4Q16254 413 aa10.21□□□□□ -0.77
CBWD1-216ENST00000489272 BRICD5Q6PL45 260 aa10.21□□□□□ -0.77
CBWD1-216ENST00000489272 ADAM23O75077 832 aa10.2□□□□□ -0.78
CBWD1-216ENST00000489272 SLC27A5Q9Y2P5 690 aa10.2□□□□□ -0.78
CBWD1-216ENST00000489272 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.19□□□□□ -0.78
CBWD1-216ENST00000489272 FECHP22830 423 aa10.18□□□□□ -0.78
CBWD1-216ENST00000489272 WNT7BP56706 349 aa10.18□□□□□ -0.78
CBWD1-216ENST00000489272 FAM161AQ3B820 660 aa10.18□□□□□ -0.78
CBWD1-216ENST00000489272 ATP6V1AP38606 617 aa10.17□□□□□ -0.78
CBWD1-216ENST00000489272 SKOR1P84550 965 aa10.17□□□□□ -0.78
CBWD1-216ENST00000489272 PTGDRQ13258 359 aa10.17□□□□□ -0.78
CBWD1-216ENST00000489272 FUT2Q10981 343 aa10.16□□□□□ -0.78
CBWD1-216ENST00000489272 IRS1P35568 1242 aa10.15□□□□□ -0.78
CBWD1-216ENST00000489272 SPRYD3Q8NCJ5 442 aa10.15□□□□□ -0.78
CBWD1-216ENST00000489272 SOBPA7XYQ1 873 aa10.14□□□□□ -0.79
CBWD1-216ENST00000489272 MMP16P51512 607 aa10.14□□□□□ -0.79
CBWD1-216ENST00000489272 KANK3Q6NY19 840 aa10.12□□□□□ -0.79
CBWD1-216ENST00000489272 SIAH2O43255 324 aa10.11□□□□□ -0.79
CBWD1-216ENST00000489272 RNF19BQ6ZMZ0 732 aa10.11□□□□□ -0.79
CBWD1-216ENST00000489272 WASF2Q9Y6W5 498 aa10.11□□□□□ -0.79
CBWD1-216ENST00000489272 KRT76Q01546 638 aa10.09□□□□□ -0.79
CBWD1-216ENST00000489272 PAXIP1Q6ZW49 1069 aaPredicted RBP10.08□□□□□ -0.8
CBWD1-216ENST00000489272 PXYLP1Q8TE99 480 aa10.08□□□□□ -0.8
CBWD1-216ENST00000489272 CFAP44Q96MT7 982 aa10.08□□□□□ -0.8
CBWD1-216ENST00000489272 PPFIA3O75145 1194 aa10.07□□□□□ -0.8
CBWD1-216ENST00000489272 SCARF1Q14162 830 aa10.07□□□□□ -0.8
CBWD1-216ENST00000489272 MRPL14Q6P1L8 145 aaKnown RBP10.07□□□□□ -0.8
CBWD1-216ENST00000489272 RDH13Q8NBN7 331 aa10.06□□□□□ -0.8
CBWD1-216ENST00000489272 ZNF385CQ66K41 422 aaPredicted RBP10.05□□□□□ -0.8
CBWD1-216ENST00000489272 PURBQ96QR8 312 aaKnown RBP10.05□□□□□ -0.8
CBWD1-216ENST00000489272 DXOO77932 396 aaKnown RBP10.04□□□□□ -0.8
CBWD1-216ENST00000489272 OATP04181 439 aa10.04□□□□□ -0.8
CBWD1-216ENST00000489272 CNTNAP3BQ96NU0 1288 aa10.04□□□□□ -0.8
CBWD1-216ENST00000489272 CNTNAP3Q9BZ76 1288 aa10.04□□□□□ -0.8
CBWD1-216ENST00000489272 MSTNO14793 375 aa10.03□□□□□ -0.8
CBWD1-216ENST00000489272 LCE3BQ5TA77 95 aa10.03□□□□□ -0.8
CBWD1-216ENST00000489272 Q8N3U1 123 aa10.03□□□□□ -0.8
CBWD1-216ENST00000489272 SVOPQ8N4V2 548 aa10.02□□□□□ -0.81
CBWD1-216ENST00000489272 EHBP1Q8NDI1 1231 aa10.02□□□□□ -0.81
CBWD1-216ENST00000489272 GCGRP47871 477 aa10.01□□□□□ -0.81
CBWD1-216ENST00000489272 CCDC24Q8N4L8 307 aa10.01□□□□□ -0.81
CBWD1-216ENST00000489272 ARHGEF15O94989 841 aa9.99□□□□□ -0.81
CBWD1-216ENST00000489272 Q3C1V9 767 aa9.99□□□□□ -0.81
CBWD1-216ENST00000489272 GPR161Q8N6U8 529 aaKnown RBP9.99□□□□□ -0.81
CBWD1-216ENST00000489272 MARSP56192 900 aaKnown RBP9.98□□□□□ -0.81
CBWD1-216ENST00000489272 SCARF2Q96GP6 870 aaPredicted RBP9.98□□□□□ -0.81
CBWD1-216ENST00000489272 SPOCK3Q9BQ16 436 aa9.98□□□□□ -0.81
CBWD1-216ENST00000489272 MAN1A2O60476 641 aa9.97□□□□□ -0.81
CBWD1-216ENST00000489272 KRTAP9-9Q9BYP9 154 aa9.97□□□□□ -0.81
CBWD1-216ENST00000489272 KRTAP9-4Q9BYQ2 154 aa9.97□□□□□ -0.81
CBWD1-216ENST00000489272 DAXXQ9UER7 740 aaPredicted RBP9.97□□□□□ -0.81
CBWD1-216ENST00000489272 METTL3Q86U44 580 aaKnown RBP9.96□□□□□ -0.82
CBWD1-216ENST00000489272 KRTAP4-12Q9BQ66 201 aa9.96□□□□□ -0.82
CBWD1-216ENST00000489272 DDX11L8A8MPP1 907 aa9.95□□□□□ -0.82
CBWD1-216ENST00000489272 ITGB2P05107 769 aa9.95□□□□□ -0.82
CBWD1-216ENST00000489272 PLA2G4EQ3MJ16 856 aa9.95□□□□□ -0.82
CBWD1-216ENST00000489272 GRIPAP1Q4V328 841 aa9.95□□□□□ -0.82
CBWD1-216ENST00000489272 WHAMMQ8TF30 809 aa9.95□□□□□ -0.82
CBWD1-216ENST00000489272 USB1Q9BQ65 265 aaKnown RBP9.95□□□□□ -0.82
CBWD1-216ENST00000489272 WDR70Q9NW82 654 aa9.94□□□□□ -0.82
CBWD1-216ENST00000489272 MLLT3P42568 568 aaPredicted RBP9.93□□□□□ -0.82
CBWD1-216ENST00000489272 COL25A1Q9BXS0 654 aaPredicted RBP9.93□□□□□ -0.82
CBWD1-216ENST00000489272 TIMP2P16035 220 aa9.92□□□□□ -0.82
CBWD1-216ENST00000489272 K7ELQ4 463 aaPredicted RBP9.91□□□□□ -0.82
CBWD1-216ENST00000489272 SLURP2P0DP57 97 aa9.91□□□□□ -0.82
CBWD1-216ENST00000489272 NUTM2FA1L443 756 aa9.9□□□□□ -0.82
CBWD1-216ENST00000489272 PROCP04070 461 aa9.9□□□□□ -0.82
CBWD1-216ENST00000489272 NNTQ13423 1086 aa9.9□□□□□ -0.82
CBWD1-216ENST00000489272 FCHSD2O94868 740 aa9.89□□□□□ -0.83
CBWD1-216ENST00000489272 ADH1CP00326 375 aa9.88□□□□□ -0.83
CBWD1-216ENST00000489272 WDR4P57081 412 aaKnown RBP9.87□□□□□ -0.83
CBWD1-216ENST00000489272 RNFT1Q5M7Z0 435 aa9.87□□□□□ -0.83
CBWD1-216ENST00000489272 SULF1Q8IWU6 871 aa9.87□□□□□ -0.83
CBWD1-216ENST00000489272 KRTAP4-8A0A0G2JLE6 195 aa9.86□□□□□ -0.83
CBWD1-216ENST00000489272 TLL2Q9Y6L7 1015 aa9.86□□□□□ -0.83
CBWD1-216ENST00000489272 GALNT6Q8NCL4 622 aa9.85□□□□□ -0.83
CBWD1-216ENST00000489272 DCAF5Q96JK2 942 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms